prot_F-serratus_M_contig937.20746.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig937.20746.1
Unique Nameprot_F-serratus_M_contig937.20746.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length180
Homology
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: D8LKD0_ECTSI (SsrA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD0_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 4.270e-57
Identity = 86/107 (80.37%), Postives = 101/107 (94.39%), Query Frame = 0
Query:   69 NKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFFNDNNR 175
            ++KARRNYE+++KF AGIEL+GSEVKSCR+SKINM+EG+AQAK GQCFLHG+HIAEC  +NRFYQH+P RPRRLLLHKREIKKLED+V QKGMT+VPLKIFF+DNNR
Sbjct:    3 HRKARRNYEILEKFVAGIELVGSEVKSCRMSKINMDEGFAQAKKGQCFLHGIHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKIFFDDNNR 109          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: A0A7S3EVW1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EVW1_9EUKA)

HSP 1 Score: 142 bits (359), Expect = 8.470e-40
Identity = 67/115 (58.26%), Postives = 92/115 (80.00%), Query Frame = 0
Query:   61 SPYKVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFFNDNNR 175
            SP K +A N+ ARRNYE++D FEAGI LLG+EVKSCR +++ + +GY + K+G+C+L  VHIA+  +T  F+QH+ TRPRRLLLHKREI+KLE +  Q+G+TIVPL+ +FN+ NR
Sbjct:   43 SPSKQVAVNRLARRNYEILDDFEAGISLLGTEVKSCRANQMQLRDGYCRIKDGECWLMNVHIAKHGTTGAFFQHEETRPRRLLLHKREIRKLEKESEQRGLTIVPLRCYFNEQNR 157          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: A0A835YRQ5_9STRA (Small protein B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 9.810e-39
Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 0
Query:   49 LRMMNVADKKGKSPYKVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFFNDNN 174
            L  +  AD     P+KVIA NK+A RNYE+++ FEAGIELLG+EVKS R  + +++EGYA AK G+C LHGVHIA   ++N + QH+  RPRRLLLHKREIK+LED   + G T VPL ++FN  N
Sbjct:    6 LLALGAADASKDGPFKVIAKNKQAYRNYEILETFEAGIELLGTEVKSARGGRCSIDEGYAAAKRGECVLHGVHIAPYATSNAYDQHEAKRPRRLLLHKREIKRLEDMTTRAGYTAVPLTLYFNHKN 131          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: A0A7S4FCI8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCI8_CHRCT)

HSP 1 Score: 130 bits (327), Expect = 3.580e-35
Identity = 63/118 (53.39%), Postives = 89/118 (75.42%), Query Frame = 0
Query:   58 KGKSPYKVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFFNDNNR 175
            KG    + +  N++AR+NYE+++++EAGI L+G+EVKSCR  KIN+ +GY Q K+G+C+L  VHIA    +  F+QH  TR RRLLL+KREI+KL+  V QKG+TIVP+K +FN +NR
Sbjct:   28 KGTGVARDVTLNRQARQNYELLEEYEAGISLVGTEVKSCRAGKINLRDGYCQIKDGECWLRNVHIARHQFSGTFFQHDETRSRRLLLNKREIRKLDAAVQQKGLTIVPVKAYFNCDNR 145          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: A0A6H2NLS0_9CYAN (SsrA-binding protein n=1 Tax=Leptolyngbya sp. LCM1.Bin17 TaxID=2480211 RepID=A0A6H2NLS0_9CYAN)

HSP 1 Score: 127 bits (320), Expect = 2.220e-34
Identity = 59/108 (54.63%), Postives = 85/108 (78.70%), Query Frame = 0
Query:   63 YKVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFF 170
            YKVI++N++AR  YE+++ +EAGIELLGSEVKS R  K+N+ +GYAQ KNG+ +LH VH++  + TN+ Y H+  R R+LLLH+ EI+KL  +V QKG+T+VPLK++ 
Sbjct:    8 YKVISDNRQARHQYEILETYEAGIELLGSEVKSIRQGKVNLRDGYAQIKNGELWLHNVHVSPHSMTNKVYNHEAKRTRKLLLHRDEIRKLIGKVEQKGLTLVPLKLYL 115          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: K9FEP1_9CYAN (SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9FEP1_9CYAN)

HSP 1 Score: 126 bits (317), Expect = 7.280e-34
Identity = 60/108 (55.56%), Postives = 84/108 (77.78%), Query Frame = 0
Query:   63 YKVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFF 170
            +KV+A+N++AR  YE++D +EAGIEL G+EVKS R  K+N+ +GYAQ KNG+ +L  VHI+    TN+ Y H+P RPRRLLLHK EI+KL  +V +KG+T+VPLK++ 
Sbjct:   14 FKVMADNRQARFTYEILDSYEAGIELKGTEVKSIRAGKVNLRDGYAQVKNGEVWLLNVHISPHDMTNQAYNHEPRRPRRLLLHKAEIRKLIGKVEEKGLTLVPLKLYL 121          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: UPI0019EE95A5 (SsrA-binding protein SmpB n=1 Tax=Leptolyngbyaceae cyanobacterium M65_K2018_010 TaxID=2747810 RepID=UPI0019EE95A5)

HSP 1 Score: 126 bits (317), Expect = 7.600e-33
Identity = 60/107 (56.07%), Postives = 84/107 (78.50%), Query Frame = 0
Query:   64 KVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFF 170
            KV+++N++AR  YE+++ FEAGIELLGSEVKS R  K+N+ +GYAQ K+G+ +L  VHI+  T TN+ Y H+  RPRRLL+H+ EI+KL  +V QKG+T+VPLKI+ 
Sbjct:  101 KVVSDNRQARHQYEILETFEAGIELLGSEVKSIRQGKVNLRDGYAQIKDGELWLQNVHISPHTMTNKAYNHEAKRPRRLLMHRDEIRKLIGKVEQKGLTLVPLKIYL 207          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: A0A2P8W7F9_9CYAN (SsrA-binding protein n=16 Tax=Cyanobacteria TaxID=1117 RepID=A0A2P8W7F9_9CYAN)

HSP 1 Score: 123 bits (309), Expect = 1.010e-32
Identity = 55/108 (50.93%), Postives = 84/108 (77.78%), Query Frame = 0
Query:   63 YKVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFF 170
            YK++++N++AR  YE+++ +EAG+EL+GSEVKS R  K+N+ +GYA  K+G+ +LH VHI+  T TN+ Y H+  R R+LLLH+ EI+KL  +V QKG+T+VPLK++ 
Sbjct:    8 YKIVSDNRQARHEYEILETYEAGLELMGSEVKSIRQGKVNLRDGYASIKDGELWLHNVHISPYTMTNKAYNHEAKRTRKLLLHRDEIRKLIGKVEQKGLTLVPLKLYL 115          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: A0A6I5NZI5_9CYAN (SsrA-binding protein n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5NZI5_9CYAN)

HSP 1 Score: 123 bits (309), Expect = 1.110e-32
Identity = 59/108 (54.63%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   63 YKVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFF 170
            YKV+A+N++AR  YE+++ +EAGIEL G+EVKS R  ++N+ +GYAQ KNGQ +L  VHI+    TN+ Y H P R RRLLLHK EI++L  +V QKG+T+VPLK++ 
Sbjct:   12 YKVVADNRQARFLYEILETYEAGIELKGTEVKSIREGRVNLRDGYAQVKNGQAWLQNVHISPHRMTNQVYNHDPRRSRRLLLHKEEIRRLIGKVEQKGLTLVPLKLYL 119          
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Match: A0A7V5AQY4_9BACT (SsrA-binding protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5AQY4_9BACT)

HSP 1 Score: 123 bits (308), Expect = 1.320e-32
Identity = 60/112 (53.57%), Postives = 86/112 (76.79%), Query Frame = 0
Query:   64 KVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSKINMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIKKLEDQVGQKGMTIVPLKIFFNDNNR 175
            +VI  N KAR++Y++++KFEAGI LLG+EVK+ RL +I+++EGYA+ KNG+ FL G+HI E     +  QH+P R RRLLLHK+EI  LE ++ +KG+T+VPL ++FND  R
Sbjct:    2 RVIMTNAKARQDYDILEKFEAGISLLGTEVKATRLGRISLKEGYARVKNGEVFLIGMHIGEYPPAGK-KQHKPNRNRRLLLHKKEILYLEQKLEEKGLTLVPLSVYFNDKGR 112          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig937.20746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKD0_ECTSI4.270e-5780.37SsrA-binding protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S3EVW1_9EUKA8.470e-4058.26Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A835YRQ5_9STRA9.810e-3956.35Small protein B n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S4FCI8_CHRCT3.580e-3553.39Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A6H2NLS0_9CYAN2.220e-3454.63SsrA-binding protein n=1 Tax=Leptolyngbya sp. LCM1... [more]
K9FEP1_9CYAN7.280e-3455.56SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxI... [more]
UPI0019EE95A57.600e-3356.07SsrA-binding protein SmpB n=1 Tax=Leptolyngbyaceae... [more]
A0A2P8W7F9_9CYAN1.010e-3250.93SsrA-binding protein n=16 Tax=Cyanobacteria TaxID=... [more]
A0A6I5NZI5_9CYAN1.110e-3254.63SsrA-binding protein n=1 Tax=Leptolyngbya sp. SIO4... [more]
A0A7V5AQY4_9BACT1.320e-3253.57SsrA-binding protein n=1 Tax=bacterium TaxID=18692... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000037SsrA-binding proteinTIGRFAMTIGR00086TIGR00086coord: 65..174
e-value: 1.9E-38
score: 129.7
IPR000037SsrA-binding proteinPFAMPF01668SmpBcoord: 66..174
e-value: 2.7E-40
score: 137.6
IPR000037SsrA-binding proteinPANTHERPTHR30308TMRNA-BINDING COMPONENT OF TRANS-TRANSLATION TAGGING COMPLEXcoord: 58..173
IPR000037SsrA-binding proteinHAMAPMF_00023SmpBcoord: 57..180
score: 40.425
IPR023620Small protein BGENE3D2.40.280.10coord: 59..176
e-value: 3.2E-39
score: 135.8
IPR023620Small protein BSUPERFAMILY74982Small protein B (SmpB)coord: 60..173
NoneNo IPR availablePRODOMPD004488coord: 66..180
e-value: 6.0E-27
score: 298.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig937contigF-serratus_M_contig937:214462..243357 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig937.20746.1mRNA_F-serratus_M_contig937.20746.1Fucus serratus malemRNAF-serratus_M_contig937 214462..243359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig937.20746.1 ID=prot_F-serratus_M_contig937.20746.1|Name=mRNA_F-serratus_M_contig937.20746.1|organism=Fucus serratus male|type=polypeptide|length=180bp
QSLDCSVRSLHHHPQTEFVAGGARVSFRNKKSRSRPPEVTSRAGSGVGLR
MMNVADKKGKSPYKVIANNKKARRNYEVIDKFEAGIELLGSEVKSCRLSK
INMEEGYAQAKNGQCFLHGVHIAECTSTNRFYQHQPTRPRRLLLHKREIK
KLEDQVGQKGMTIVPLKIFFNDNNRRGRRI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000037SsrA-bd_prot
IPR023620SmpB