prot_F-serratus_M_contig937.20743.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig937.20743.1
Unique Nameprot_F-serratus_M_contig937.20743.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length223
Homology
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BLAST of mRNA_F-serratus_M_contig937.20743.1 vs. uniprot
Match: D8LKD7_ECTSI (ACB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD7_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 1.090e-62
Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 0 
Query:    2 LLASSGSWSEAPDDQALTKKFRISLMFYTKELMANAKQYGEGDKLALYGLFKQAKWGDCPAGLVSAQRDDPVGSVKVRAWVTNRGKPTSQAMQEFIAVLCRVAPGWESRVVVPGS 116
            +LAS+GSWSEAPDD ALTKKFR+SLMFYTKELMANA+QYGE DKLALYGLFKQAKWGDCP GLV+AQR +PVGSVKVRAWVTNRGKPT+QAMQEFI VL RV+PGWESRVV+ G+
Sbjct:   86 MLASTGSWSEAPDDLALTKKFRVSLMFYTKELMANARQYGEADKLALYGLFKQAKWGDCPDGLVTAQRGNPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVISGN 200
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BLAST of mRNA_F-serratus_M_contig937.20743.1 vs. uniprot
Match: A0A6H5LAN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN0_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 1.560e-57
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 0 
Query:    2 LLASSGSWSEAPDDQALTKKFRISLMFYTKELMANAKQYGEGDKLALYGLFKQAKWGDCPAGLVSAQRDDPVGSVKVRAWVTNRGKPTSQAMQEFIAVLCRVAPGWESRVVVPGS 116
            +L S+GSWSEAPDD ALTKKFR+SLMFYTKELM+NA+QYGE DKLALYGLFKQAKWGDCPAG+V+AQR DPVGSVKVRAWVTNRGKPT+QAMQEFI VL RV+PGWESRVV+ G+
Sbjct: 1729 MLPSTGSWSEAPDDVALTKKFRVSLMFYTKELMSNARQYGEADKLALYGLFKQAKWGDCPAGMVAAQRGDPVGSVKVRAWVTNRGKPTAQAMQEFIVVLGRVSPGWESRVVMSGN 1843
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig937.20743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKD7_ECTSI1.090e-6285.22ACB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LAN0_9PHAE1.560e-5784.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014352FERM/acyl-CoA-binding protein superfamilyGENE3D1.20.80.10coord: 16..123
e-value: 1.2E-11
score: 46.0
IPR000582Acyl-CoA-binding protein, ACBPPFAMPF00887ACBPcoord: 35..102
e-value: 2.3E-11
score: 43.7
IPR000582Acyl-CoA-binding protein, ACBPPROSITEPS51228ACB_2coord: 1..109
score: 13.311
IPR035984Acyl-CoA binding protein superfamilySUPERFAMILY47027Acyl-CoA binding proteincoord: 36..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig937contigF-serratus_M_contig937:148346..150692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig937.20743.1mRNA_F-serratus_M_contig937.20743.1Fucus serratus malemRNAF-serratus_M_contig937 148307..150736 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig937.20743.1 ID=prot_F-serratus_M_contig937.20743.1|Name=mRNA_F-serratus_M_contig937.20743.1|organism=Fucus serratus male|type=polypeptide|length=223bp
MLLASSGSWSEAPDDQALTKKFRISLMFYTKELMANAKQYGEGDKLALYG
LFKQAKWGDCPAGLVSAQRDDPVGSVKVRAWVTNRGKPTSQAMQEFIAVL
CRVAPGWESRVVVPGSISASRASSPPVARISGSHRLTSASSSSSSSPPAP
EAPAGGRSGRKSSSHSSPIGLPNLGEDSSAASRQRVPPGSGSKSVYETRS
ASPPPKATGVEKLSSKEHVRVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014352FERM/acyl-CoA-bd_prot_sf
IPR000582Acyl-CoA-binding_protein
IPR035984Acyl-CoA-binding_sf