prot_F-serratus_M_contig937.20738.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig937.20738.1
Unique Nameprot_F-serratus_M_contig937.20738.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length262
Homology
BLAST of mRNA_F-serratus_M_contig937.20738.1 vs. uniprot
Match: D8LKD9_ECTSI (MABP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD9_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 9.020e-52
Identity = 128/247 (51.82%), Postives = 143/247 (57.89%), Query Frame = 0
Query:    1 LALQRTFLGLSFLCSYACSSKGWVQAGLGDRGPLRDSDPALCTLKNLLRLVCRQVEIAEETRAALRRSRSSGAGVSGT--APTPATMVIPTWDTYTPMVRVKNGGD--ASWVITPD--RGSGANWSYDSSIGNGEEGRGRTGMPLVSELVREVVGSAVDMVELAKIMETVLDVVKRHSSHSSETFWR-DVGDFGAMLFGE---RRQAHVSAFVMLAALCKMATGMLRTLADGELVARDLGNKIIALD 237
            LALQRTF GLSFLC+Y CSS+ WVQA  G +GPL D +PA   LK+LLRLVC QVEIAEE R A RRSR +G G  G   A TP  M IPTWDTYTPMV VK GG   A W  TPD  R  G+  S+D      E    R G P       +  G  +D                 H   +     R DV DF   L  E    ++AHVSAFV LAALCKMATG+LRTL+DGELVARDLGNK    D
Sbjct:  707 LALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNPAFSALKDLLRLVCGQVEIAEEAREAFRRSRMTGTGPHGPLLATTPGIMAIPTWDTYTPMV-VKGGGREAAPWARTPDMDRAGGSRASFDF-----ESSPSRAGSPRAPSSNGDDGGMVLD-----------------HPLPAPSPLGREDVHDFVTELVQEVIGSKRAHVSAFVTLAALCKMATGILRTLSDGELVARDLGNKKSTFD 930          
BLAST of mRNA_F-serratus_M_contig937.20738.1 vs. uniprot
Match: W7U6C9_9STRA (Brefeldin a-inhibited guanine nucleotide-exchange n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C9_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.300e-17
Identity = 53/132 (40.15%), Postives = 85/132 (64.39%), Query Frame = 0
Query:  134 RTGMP---LVSELVREVVGSAVDMVELAKIMETVLDVVKRHSSHSSETFWRDVGDFGAMLFGERRQAHVSAFVMLAALCKMATGMLRTLA--DGELVARDLGNKIIALDMIHTMLRSTGEYFRFNRIFGYQV 260
            RT +P   +   LV +VV +A+  VEL K  +  +D +KR S+ S E+FW+++    AM+   R QA  +AF++LAA+CK+A+   RT     G+LVARD+  K++AL+++ T+L+  GE F+ + +FG QV
Sbjct:  760 RTPVPAETIARSLVLDVVAAAIQFVELTKATQRAVDCIKRGSASSHESFWKELLTVSAMI--TRSQAEENAFLLLAAICKLASEAPRTAVAGTGQLVARDVAAKLLALELLSTLLKRAGERFQSSPLFGTQV 889          
BLAST of mRNA_F-serratus_M_contig937.20738.1 vs. uniprot
Match: A0A7S1TSV1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSV1_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.350e-14
Identity = 42/122 (34.43%), Postives = 76/122 (62.30%), Query Frame = 0
Query:  139 LVSELVREVVGSAVDMVELAKIMETVLDVVKRHSSHSSETFWRDVGDFGAMLFGERRQAHVSAFVMLAALCKMATGMLRTLADGELVARDLGNKIIALDMIHTMLRSTGEYFRFNRIFGYQV 260
            +V +L+ + +   +D VEL++++  +L++V R +++ +   W ++    + +F     AH++ FV+L ALCK A   LR L  GE+VARDL  K++AL+++  +LR  G+  R + +FGY V
Sbjct:  757 MVRDLLTDFLDKVLDHVELSRVINAILNIVMRQTANDAH--WTELHVIASRIFNHA--AHINMFVLLCALCKDAVAPLRRLVSGEIVARDLAIKLVALELLGELLRGAGDNCRSSNVFGYLV 874          
BLAST of mRNA_F-serratus_M_contig937.20738.1 vs. uniprot
Match: A0A6H5KWN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN7_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.570e-12
Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    1 LALQRTFLGLSFLCSYACSSKGWVQAGLGDRGPLRDSDPALCTLKNLLRLVCRQ 54
            LALQRTF GLSFLC+Y CSS+ WVQA  G +GPL D + A   LK LLRLVC Q
Sbjct:   79 LALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNRAFSALKYLLRLVCGQ 132          
BLAST of mRNA_F-serratus_M_contig937.20738.1 vs. uniprot
Match: A0A835ZFI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.210e-9
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0
Query:  139 LVSELVREVVGSAVDMVELAKIMETVLDVVKRHSSHS------SETFWRDVGDFGAMLFGERRQ---AHVSAFVMLAALCKMATGMLRTLADGELVARDLGNKIIALDMIHTMLRSTGEYFRFNRIFGYQV 260
            +V E+V +V   AV MVEL++  E  L  V+RHS+ +       E FW +    G  L+  +     +  S F +L ALCKMA   LR  A+G +  RD+G +++ALD++  ML    +    + + GYQ 
Sbjct: 1250 IVREIVWDVAEGAVRMVELSRTTERALKAVRRHSAGARGSDTADEEFWGEAVVLGVSLYPPQESGSHSRRSLFEVLLALCKMAAAPLRR-ANGGVPIRDVGMRVLALDLLRQMLNGVPDQLAEDDVLGYQA 1379          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig937.20738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKD9_ECTSI9.020e-5251.82MABP domain-containing protein n=1 Tax=Ectocarpus ... [more]
W7U6C9_9STRA1.300e-1740.15Brefeldin a-inhibited guanine nucleotide-exchange ... [more]
A0A7S1TSV1_9STRA1.350e-1434.43Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A6H5KWN7_9PHAE2.570e-1266.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZFI0_9STRA1.210e-934.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig937contigF-serratus_M_contig937:107353..117068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig937.20738.1mRNA_F-serratus_M_contig937.20738.1Fucus serratus malemRNAF-serratus_M_contig937 107353..117068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig937.20738.1 ID=prot_F-serratus_M_contig937.20738.1|Name=mRNA_F-serratus_M_contig937.20738.1|organism=Fucus serratus male|type=polypeptide|length=262bp
LALQRTFLGLSFLCSYACSSKGWVQAGLGDRGPLRDSDPALCTLKNLLRL
VCRQVEIAEETRAALRRSRSSGAGVSGTAPTPATMVIPTWDTYTPMVRVK
NGGDASWVITPDRGSGANWSYDSSIGNGEEGRGRTGMPLVSELVREVVGS
AVDMVELAKIMETVLDVVKRHSSHSSETFWRDVGDFGAMLFGERRQAHVS
AFVMLAALCKMATGMLRTLADGELVARDLGNKIIALDMIHTMLRSTGEYF
RFNRIFGYQVW*
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