prot_F-serratus_M_contig933.20722.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig933.20722.1
Unique Nameprot_F-serratus_M_contig933.20722.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length79
Homology
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5KWE4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE4_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.940e-8
Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYGRKSSLQHLQPF 77
            PQYNGVAER  GL+   ++A       +   + +   DR+WAEA+++AC+  +    S+     SPYE W+G  S   H +P+
Sbjct:   77 PQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEAS---HARPY 156          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.360e-8
Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYG 66
            PQYNGVAER  GL+ E ++A       +   + +   D++WAEA+++AC+  +    S+     SPYE WYG
Sbjct:  191 PQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 262          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A0A9XC07_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XC07_LYGHE)

HSP 1 Score: 58.9 bits (141), Expect = 2.490e-8
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIAMLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYGRKSSLQHLQPFG 78
            PQ NG +ER    +  K+ A+L E   G  D +W EA+  A  + +   TS+++  T+P+EKWYGRK  + H+Q FG
Sbjct:    8 PQLNGKSERIGRTIMNKARALLMES--GLNDEMWGEAVQVAAYLLNRGYTSTVD--TTPFEKWYGRKPDMSHIQKFG 80          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.530e-8
Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYG 66
            PQYNGVAER  GL+ E ++A       +   + +   D++WAEA+++AC+  +    S+     SPYE WYG
Sbjct:  411 PQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 482          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.580e-8
Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYGRKSSLQHLQPF 77
            PQYNGVAER  GL+   ++A       +   + +   DR+WAEA+++AC+  +    S+     SPYE W+G  S   H +P+
Sbjct:  729 PQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEAS---HARPY 808          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.590e-8
Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYG 66
            PQYNGVAER  GL+ E ++A       +   + +   D++WAEA+++AC+  +    S+     SPYE WYG
Sbjct:   77 PQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 148          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.610e-8
Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYG 66
            PQYNGVAER  GL+ E ++A       +   + +   D++WAEA+++AC+  +    S+     SPYE WYG
Sbjct:  344 PQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYG 415          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.610e-8
Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYG 66
            PQYNGVAER  GL+ E ++A       +   + +   D++WAEA+++AC+  +    S+     SPYE WYG
Sbjct:  823 PQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYG 894          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.610e-8
Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYG 66
            PQYNGVAER  GL+ E ++A       +   + +   D++WAEA+++AC+  +    S+     SPYE WYG
Sbjct:  530 PQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYG 601          
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.620e-8
Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    2 PQYNGVAERAFGLLREKSIA-------MLEEMTVGACDRIWAEALNYACDMCDMCVTSSLEGGTSPYEKWYG 66
            PQYNGVAER  GL+ E ++A       +   + +   D++WAEA+++AC+  +    S+     SPYE WYG
Sbjct:  427 PQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYG 498          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig933.20722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWE4_9PHAE1.940e-836.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVR5_9PHAE2.360e-838.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A0A9XC07_LYGHE2.490e-840.26Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JV76_9PHAE2.530e-838.89Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5K2M6_9PHAE2.580e-836.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKK1_9PHAE2.590e-838.89Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE2.610e-838.89Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JBA7_9PHAE2.610e-838.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.610e-838.89Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB16_9PHAE2.620e-838.89Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..77
e-value: 1.2E-5
score: 26.6
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig933contigF-serratus_M_contig933:249475..249711 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig933.20722.1mRNA_F-serratus_M_contig933.20722.1Fucus serratus malemRNAF-serratus_M_contig933 249205..249711 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig933.20722.1 ID=prot_F-serratus_M_contig933.20722.1|Name=mRNA_F-serratus_M_contig933.20722.1|organism=Fucus serratus male|type=polypeptide|length=79bp
MPQYNGVAERAFGLLREKSIAMLEEMTVGACDRIWAEALNYACDMCDMCV
TSSLEGGTSPYEKWYGRKSSLQHLQPFGT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf