prot_F-serratus_M_contig93.20693.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig93.20693.1
Unique Nameprot_F-serratus_M_contig93.20693.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length76
Homology
BLAST of mRNA_F-serratus_M_contig93.20693.1 vs. uniprot
Match: D7FQN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN7_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.240e-28
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    5 PVPALFGTIGFAVGCIVILVVLKIIQCTGKMSKDNTGIGFTVAIMSCISLWLLWLMAWFHQWHPLITPEYP 75
            P P L GT+GF  GC+ +L ++K  Q +G +SKDNTGIGFTV I S  S+WLLW MAWFHQWHPLITPE+P
Sbjct:   50 PTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKDNTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP 120          
BLAST of mRNA_F-serratus_M_contig93.20693.1 vs. uniprot
Match: A0A6H5KZQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ5_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.360e-28
Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    5 PVPALFGTIGFAVGCIVILVVLKIIQCTGKMSKDNTGIGFTVAIMSCISLWLLWLMAWFHQWHPLITPEYP 75
            P P L GT+GF  GC+ +L ++K  Q +G +SK+NTGIGFTV I S  S+WLLW MAWFHQWHPLITPE+P
Sbjct:    4 PTPVLSGTLGFFFGCLFLLGIMKAGQLSGSLSKENTGIGFTVVITSAFSMWLLWAMAWFHQWHPLITPEFP 74          
BLAST of mRNA_F-serratus_M_contig93.20693.1 vs. uniprot
Match: A0A835YSN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.840e-18
Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    1 MSTIPVPALFGTIGFAVGCIVILVVLKIIQCTGKMSKDNTGIGFTVAIMSCISLWLLWLMAWFHQWHPLITPEYP 75
            M   P+P L+GT+ F+  C+ ++ + +    TG ++K    IG+ V ++S + +WLLW+MAW HQWHPL+ P YP
Sbjct:    1 MGDHPLPILYGTLVFSAMCLSVMGLCRAGTMTGALTKPEAEIGYVVVVLSSVCMWLLWMMAWLHQWHPLVEPLYP 75          
BLAST of mRNA_F-serratus_M_contig93.20693.1 vs. uniprot
Match: B7G2Q6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2Q6_PHATC)

HSP 1 Score: 75.1 bits (183), Expect = 3.170e-16
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MSTIPVPALFGTIGFAVGCIVILVVLKIIQCTGKMSKDNTGIGFTVAIMSCISLWLLWLMAWFHQWHPLITPEY 74
            MS IP P + GTI + +  +V +  +   + TG +SKDN  IG  V  ++C S+WL WL AW HQWHPLI P Y
Sbjct:    1 MSGIPGPVVTGTIAYLLLGVVAVGGIYGSRATGMLSKDNADIGNVVVSLACFSMWLFWLCAWLHQWHPLIAPIY 74          
BLAST of mRNA_F-serratus_M_contig93.20693.1 vs. uniprot
Match: A0A1E7FSC6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSC6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.170e-16
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    1 MSTIPVPALFGTIGFAVGCIVILVVLKIIQCTGKMSKDNTGIGFTVAIMSCISLWLLWLMAWFHQWHPLITPEY 74
            MS IP P + G+I + V  +V++ +++  +  GK+ K++ G G  V ++S  S+WL WL AW HQWHPLI+P Y
Sbjct:    1 MSGIPAPLITGSIAYLVLGVVLIGLVQAARGVGKLDKNDAGTGNVVVVISVFSMWLFWLCAWMHQWHPLISPIY 74          
BLAST of mRNA_F-serratus_M_contig93.20693.1 vs. uniprot
Match: K8YWS7_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWS7_NANGC)

HSP 1 Score: 59.7 bits (143), Expect = 3.920e-10
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0
Query:    1 MSTIPVPALFGTIGFAVGCIVILVVLKIIQCTGKMSKDNTGIGFTVAIMSCISLWLLWLMAWFHQWHPLITPEYP 75
            MST+  P +   I + V C  ++V+  I + T  + KDN GI     I + I  ++LWL+ W  QWHPL+TP  P
Sbjct:    1 MSTLS-PPISALIAWTVICGTVIVLTNIAKVTKYIDKDNAGIAVVFTITAGICTFILWLVTWMQQWHPLLTPTLP 74          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig93.20693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FQN7_ECTSI1.240e-2864.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZQ5_9PHAE1.360e-2863.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSN8_9STRA4.840e-1841.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B7G2Q6_PHATC3.170e-1647.30Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1E7FSC6_9STRA3.170e-1643.24Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
K8YWS7_NANGC3.920e-1038.67Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008389ATPase, V0 complex, subunit e1/e2PFAMPF05493ATP_synt_Hcoord: 9..74
e-value: 1.2E-13
score: 51.2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig93contigF-serratus_M_contig93:676547..681403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig93.20693.1mRNA_F-serratus_M_contig93.20693.1Fucus serratus malemRNAF-serratus_M_contig93 676410..681405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig93.20693.1 ID=prot_F-serratus_M_contig93.20693.1|Name=mRNA_F-serratus_M_contig93.20693.1|organism=Fucus serratus male|type=polypeptide|length=76bp
MSTIPVPALFGTIGFAVGCIVILVVLKIIQCTGKMSKDNTGIGFTVAIMS
CISLWLLWLMAWFHQWHPLITPEYP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008389ATPase_V0-cplx_e1/e2_su