prot_F-serratus_M_contig918.20580.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig918.20580.1
Unique Nameprot_F-serratus_M_contig918.20580.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length119
Homology
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: A0A835ZFT3_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT3_9STRA)

HSP 1 Score: 104 bits (260), Expect = 9.720e-27
Identity = 91/118 (77.12%), Postives = 103/118 (87.29%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAGGGDY 118
            MRHLA YM+LVLGG ASPS +DVT ALS+VG++ADE R+ QLIA++EGKD+N ++EAGK KLAS G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFG     GGDY
Sbjct:    1 MRHLAVYMMLVLGGNASPSAEDVTKALSSVGIEADEARLSQLIAEMEGKDLNEVMEAGKKKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGE--GGDY 116          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: D7G7B6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B6_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.650e-26
Identity = 96/111 (86.49%), Postives = 103/111 (92.79%), Query Frame = 0
Query:    8 MLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAGGGDY 118
            MLLVLGG ASP+K+DVTTAL+AVG++ DE R+DQLIAD+ GKDI ALIEAGKGKLASFG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF XXX GGGDY
Sbjct:    1 MLLVLGGNASPTKEDVTTALAAVGIECDEARLDQLIADMAGKDIAALIEAGKGKLASFG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFXXXXEGGGDY 110          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: A0A7S1BJ38_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJ38_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.280e-22
Identity = 87/118 (73.73%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAGGGDY 118
            M+HLA Y+L VLGG  SPS  DVTTALSAVG++AD ER+  L+ DLEGKD+N L+ +GKG LA FG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMGGGMDMFG   AG  DY
Sbjct:    1 MKHLAAYLLCVLGGNESPSVSDVTTALSAVGVEADSERLATLVKDLEGKDLNELLTSGKGLLAKFG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMGGGMDMFGGDEAG--DY 114          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: B7GA61_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA61_PHATC)

HSP 1 Score: 93.6 bits (231), Expect = 2.350e-22
Identity = 81/118 (68.64%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAGGGDY 118
            M+HLA Y+LL LGG ASP+K D+T ALSAVG++ D   +D+++ADLEG+D+ AL+E+G   LA+FG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+D+GGGMDMFG    GGGDY
Sbjct:    1 MKHLAAYLLLQLGGNASPTKDDITQALSAVGVEVDGADLDRMLADLEGQDLEALLESGNALLATFG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDLGGGMDMFGAEEGGGGDY 115          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: A0A7R9ZND5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZND5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.520e-22
Identity = 80/118 (67.80%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAGGGDY 118
            M+H+A Y+L VLGGK +P+K D++ A+S VG++AD+  +D L+  LEGKD+N L+E+GKG LA  GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D+GGGMDMFG    GGGDY
Sbjct:    1 MKHMAVYLLCVLGGKENPTKDDISKAMSTVGLEADDASVDALLTALEGKDLNELLESGKGLLAKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMDLGGGMDMFGGD-EGGGDY 117          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: A0A7S2RFX2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFX2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 9.730e-22
Identity = 82/119 (68.91%), Postives = 100/119 (84.03%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAG-GGDY 118
            M+H+A Y+LLVLGG ASPS  DVT +L++VG++ D+E +D+LI++L+GKD+N ++E+GK  LA FG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMGGGMDMFG   AG GGDY
Sbjct:    1 MKHVAAYLLLVLGGNASPSADDVTKSLASVGVEVDKESLDKLISELDGKDVNEIMESGKDMLAKFG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMGGGMDMFGGDEAGDGGDY 116          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: A0A7S2H9R1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H9R1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.860e-19
Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAGGG 116
            M+HLA Y+LL L G  SPS  DV+ ALS+VG++AD E +D+LI++++GKDIN ++E+G  KLA FG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFG    G G
Sbjct:    1 MKHLAVYLLLKLSGNESPSADDVSKALSSVGIEADSESLDKLISEMDGKDINEVLESGNAKLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADIGGGMDMFGGDEGGDG 116          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: A0A8K1FF81_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF81_PYTOL)

HSP 1 Score: 85.9 bits (211), Expect = 2.360e-19
Identity = 80/118 (67.80%), Postives = 95/118 (80.51%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAGGGDY 118
            MR++A Y+L VLGG A+PS  DVT  LS+VG++ D ER++++I++LEGKDIN +I AG  KLA FGG XXXXXXXXXXXXXXXXXXXXXXXXXXXX   D+GGGMDMFG    GG DY
Sbjct:    1 MRYIAAYLLAVLGGNAAPSADDVTQILSSVGVEVDAERLNKVISELEGKDINEVIAAGSKKLAKFGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XDLGGGMDMFG---GGGSDY 113          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: A0A7S0C3X8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3X8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.560e-19
Identity = 82/118 (69.49%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGXXXAGGGDY 118
            M+H+A Y+LLVLGG ASPS  DV  AL  VG++ ++ER++ LI++LEGKD++ LI  G GKLA  GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +DMGGGMDMFG   A G DY
Sbjct:    1 MKHMAAYLLLVLGGNASPSADDVKKALGVVGVEVEDERLNALISELEGKDLSELIATGTGKLAQLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MDMGGGMDMFGGEAATG-DY 116          
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Match: A0A4D9D2N6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2N6_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 5.270e-19
Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 0
Query:    1 MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI---DMGGGMDMFG 109
            MRHLATY+LL LGG  +PS  DVTTALS+VG++ADE R+  L+ DLEGKD+  LIE G   LA+FGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D+GG MDMFG
Sbjct:    1 MRHLATYLLLKLGGNENPSASDVTTALSSVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGAMDMFG 112          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig918.20580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFT3_9STRA9.720e-2777.1260s acidic ribosomal protein-domain-containing pro... [more]
D7G7B6_ECTSI1.650e-2686.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1BJ38_9STRA2.280e-2273.73Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
B7GA61_PHATC2.350e-2268.64Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9ZND5_9STRA3.520e-2267.80Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2RFX2_9STRA9.730e-2268.91Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2H9R1_9STRA1.860e-1968.10Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A8K1FF81_PYTOL2.360e-1967.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0C3X8_9STRA2.560e-1969.49Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A4D9D2N6_9STRA5.270e-1973.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..60
e-value: 1.2E-21
score: 78.6
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 17..105
e-value: 2.0E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 1..108
NoneNo IPR availablePANTHERPTHR21141:SF560S ACIDIC RIBOSOMAL PROTEIN P2coord: 1..108
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
IPR027534Ribosomal protein L12 familyHAMAPMF_01478Ribosomal_L12_archcoord: 2..109
score: 13.188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig918contigF-serratus_M_contig918:337770..340127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig918.20580.1mRNA_F-serratus_M_contig918.20580.1Fucus serratus malemRNAF-serratus_M_contig918 337532..340947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig918.20580.1 ID=prot_F-serratus_M_contig918.20580.1|Name=mRNA_F-serratus_M_contig918.20580.1|organism=Fucus serratus male|type=polypeptide|length=119bp
MRHLATYMLLVLGGKASPSKKDVTTALSAVGMDADEERIDQLIADLEGKD
INALIEAGKGKLASFGGGGGGGGGGGGGGDAEAPKVEEKKVEEEEEEEID
MGGGMDMFGGDDAGGGDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf
IPR027534Ribosomal_L12