prot_F-serratus_M_contig911.20539.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig911.20539.1
Unique Nameprot_F-serratus_M_contig911.20539.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length651
Homology
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A0H5RDG4_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RDG4_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 3.080e-16
Identity = 43/92 (46.74%), Postives = 65/92 (70.65%), Query Frame = 0
Query:    1 MDPELERTFRDHGASVNAVSYSPNMKQLVSAADSKLM-LWSFRSQLRALPFKGHTGTVHHVEFSPDGALMASASRDRTVRLWMPSARGGSSV 91
            +DP +ERTFR    SV +V+++PNMKQ+V+A+D  ++ +W+F+  +RA  F GHT  V  V+FS  G L+ASAS+D T+R W P  +G S++
Sbjct:    6 LDPCVERTFRGIRGSVTSVAFNPNMKQVVTASDDNIVTVWNFKPDMRAFRFVGHTAAVLGVDFSSSGRLVASASKDGTLRFWQPRVKGTSTL 97          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: D8UD37_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UD37_VOLCA)

HSP 1 Score: 92.0 bits (227), Expect = 6.360e-16
Identity = 49/99 (49.49%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    2 DPELERTFRDHGASVNAVSYSPNMKQLVSAA-DSKLMLWSFRSQLRALPFKGHTGT--------VHHVEFSPDGALMASASRDRTVRLWMPSARGGSSV 91
            DP LER+FR H  +V +V ++ NMKQLVS + D+ +M+W+F+ QLRA  F GH  +        V+ V FSP  AL+AS S+DRTVRLW P+  G S+V
Sbjct:    2 DPTLERSFRGHKDAVTSVCFNHNMKQLVSGSLDNCVMVWNFKPQLRAFRFAGHKASHMYRTLAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTV 100          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A7S1HG56_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HG56_HEMAN)

HSP 1 Score: 85.5 bits (210), Expect = 2.500e-14
Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = 0
Query:    2 DPELERTFRDHGASVNAVSYSPNMKQLVSAADS-KLMLWSFRSQLRALPFKGHTGTVHHVEFSPDGALMASASRDRTVRLWMP--SARGGSSV 91
            DP LER+FR H  +V +V ++PNMKQL+S AD   LM+W+F+  LR++    H G V  V  + +  ++AS S+DRTVRLW P  S++G S+V
Sbjct:   37 DPTLERSFRGHQDAVRSVVFNPNMKQLLSGADDGDLMVWNFKPTLRSIRCSDHQGPVLSVAIAQEKGIIASGSKDRTVRLWAPHISSKGKSTV 129          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A814CXG2_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814CXG2_9BILA)

HSP 1 Score: 84.0 bits (206), Expect = 1.700e-13
Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    2 DPELERTFRDHGASVNAVSYSPNMKQLVSAA-DSKLMLWSFRSQLRALPFKGHTGTVHHVEFSPDGALMASASRDRTVRLWMPS 84
            DP+LE+ F+ H ++V  +S+SPN KQLVS + D+ L LW F+ Q+RA  F      VH V FSP G L+AS S+D+ VRLW+PS
Sbjct:    3 DPKLEKHFKSHRSAVTCLSFSPNTKQLVSGSLDACLFLWPFKPQVRAYRFDA----VHSVCFSPSGHLIASGSKDKKVRLWIPS 82          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A7L1EBV4_OENON (POC1B protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7L1EBV4_OENON)

HSP 1 Score: 79.0 bits (193), Expect = 4.210e-12
Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    2 DPELERTFRDHGASVNAVSYSPNMKQL--------VSAADSKLMLWSFRSQLRALPFKGHTGTVHHVEFSPDGALMASASRDRTVRLWMPSARGGSSV 91
            DP L R F  H A+V  V+++ N   L          + D  L+LW   +Q RA  F+GH   V  V++SPDG ++ASAS D TVRLW+P   G SSV
Sbjct:    7 DPILIRPFHGHTAAVTGVAFNANAAGLGEGGPGAVTCSVDRLLILWKLTTQCRAYRFEGHAEAVTSVDYSPDGQVLASASHDHTVRLWIPCIHGESSV 104          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A0K2TYU8_LEPSM (Uncharacterized protein n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TYU8_LEPSM)

HSP 1 Score: 79.3 bits (194), Expect = 4.750e-12
Identity = 37/92 (40.22%), Postives = 62/92 (67.39%), Query Frame = 0
Query:    2 DPELERTFRDHGASVNAVSYSPNMKQLV-SAADSKLMLWSFRSQ--LRALPFKGHTGTVHHVEFSPDGALMASASRDRTVRLWMPSARGGSS 90
            +P+L   FR     V  +S+ P++KQ+  S+ DS +M+W+F S+  L+AL + GHT  V  +++SP G+L+AS+S+DRT+R+W+  +  G S
Sbjct:    3 EPQLAHQFRGLKGGVTGLSFHPHIKQVAASSLDSNIMVWNFSSENNLKALRYSGHTDAVLDIQYSPSGSLLASSSKDRTIRIWVVKSVKGQS 94          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A5E4R852_9NEOP (ANAPC4_WD40 domain-containing protein n=1 Tax=Leptidea sinapis TaxID=189913 RepID=A0A5E4R852_9NEOP)

HSP 1 Score: 77.0 bits (188), Expect = 1.520e-11
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 0
Query:    1 MDPELERTFRDHGASV-NAVSYSPNMKQLVSAA-DSKLMLWSFRSQLRALPFKGHTGTVHHVEFSPDGALMASASRDRTVRLWMPSARGGSSV 91
            ++P LE+    H  S+ ++++++PN KQ+     DS ++LW      +   F+GH   V  V FSPDG  MASASRDRT+RLW+P+  G + V
Sbjct:    4 LEPSLEKVLNGHHKSIISSLAFNPNEKQIACGCLDSSVLLWDLNGT-KNYRFQGHNEAVTDVVFSPDGRYMASASRDRTIRLWVPTVTGSTGV 95          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A821T6F2_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A821T6F2_9BILA)

HSP 1 Score: 77.0 bits (188), Expect = 2.760e-11
Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 0
Query:    2 DPELERTFRDHGASVNAVSYSPNMKQLVSAA-DSKLMLWSFRSQLRALPFKGHT------------------------------------------------GTVHHVEFSPDGALMASASRDRTVRLWMPSARGGSSV 91
            DP+LE+ FR H ++V ++S+SPN KQ+VS + DS L +W F+ Q+RA  F GH                                                   V+ V FSP G L+AS S+D+T+R+W+PS +G S+V
Sbjct:    3 DPKLEKQFRSHRSTVTSLSFSPNTKQIVSGSLDSCLFVWPFKPQVRAYRFVGHNVSNSILKNRDSHIYRYELKVETFYFQLNSSLTLLLNIAAVLFRLCLTQDAVYSVCFSPSGHLIASGSKDKTIRVWIPSVKGESTV 141          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A7K9BRJ1_9PICI (POC1B protein (Fragment) n=1 Tax=Psilopogon haemacephalus TaxID=2585815 RepID=A0A7K9BRJ1_9PICI)

HSP 1 Score: 75.5 bits (184), Expect = 3.890e-11
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   30 SAADSKLMLWSFRSQLRALPFKGHTGTVHHVEFSPDGALMASASRDRTVRLWMPSARGGSSV 91
            S+ D  LM+W  ++Q RA  F GH   V  V+FSPDG L+ASASRDRTVRLW+P   G SSV
Sbjct:    3 SSLDGLLMVWKLKAQSRAYKFVGHEEAVSSVQFSPDGQLLASASRDRTVRLWIPCIHGESSV 64          
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Match: A0A819YN58_9BILA (Hypothetical protein n=8 Tax=Rotaria TaxID=231623 RepID=A0A819YN58_9BILA)

HSP 1 Score: 77.0 bits (188), Expect = 4.370e-11
Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 0
Query:    2 DPELERTFRDHGASVNAVSYSPNMKQLVSAA-DSKLMLWSFRSQLRALPFKGHT------------------------------------------------GTVHHVEFSPDGALMASASRDRTVRLWMPSARGGSSV 91
            DP+LE+ FR H ++V ++S+SPN KQ+VS + DS L +W F+ Q+RA  F GH                                                   V+ V FSP G L+AS S+D+T+R+W+PS +G S+V
Sbjct:    3 DPKLEKQFRSHRSTVTSLSFSPNTKQIVSGSLDSCLFVWPFKPQVRAYRFVGHNVSNSILKNRDSHIYRYELKVETFYFQLNSSLTLLLNIAAVLFRLCLTQDAVYSVCFSPSGHLIASGSKDKTIRVWIPSVKGESTV 141          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig911.20539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0H5RDG4_9EUKA3.080e-1646.74Uncharacterized protein n=1 Tax=Spongospora subter... [more]
D8UD37_VOLCA6.360e-1649.49Uncharacterized protein (Fragment) n=1 Tax=Volvox ... [more]
A0A7S1HG56_HEMAN2.500e-1447.31Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A814CXG2_9BILA1.700e-1351.19Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A7L1EBV4_OENON4.210e-1242.86POC1B protein (Fragment) n=3 Tax=Passeriformes Tax... [more]
A0A0K2TYU8_LEPSM4.750e-1240.22Uncharacterized protein n=2 Tax=Lepeophtheirus sal... [more]
A0A5E4R852_9NEOP1.520e-1140.86ANAPC4_WD40 domain-containing protein n=1 Tax=Lept... [more]
A0A821T6F2_9BILA2.760e-1133.09Hypothetical protein n=1 Tax=Rotaria socialis TaxI... [more]
A0A7K9BRJ1_9PICI3.890e-1158.06POC1B protein (Fragment) n=1 Tax=Psilopogon haemac... [more]
A0A819YN58_9BILA4.370e-1133.09Hypothetical protein n=8 Tax=Rotaria TaxID=231623 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 612..632
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 2..295
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 2..295
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 593..636
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 593..636
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 237..251
score: 38.4
coord: 195..209
score: 43.03
coord: 111..125
score: 37.55
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 253..292
e-value: 4.5E-10
score: 49.5
coord: 169..208
e-value: 5.2E-12
score: 55.9
coord: 2..40
e-value: 4.1E-5
score: 33.0
coord: 127..166
e-value: 2.2E-10
score: 50.5
coord: 211..250
e-value: 4.2E-10
score: 49.6
coord: 85..124
e-value: 1.8E-5
score: 34.2
coord: 43..82
e-value: 2.2E-7
score: 40.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 257..291
e-value: 5.6E-8
score: 33.3
coord: 50..81
e-value: 3.1E-8
score: 34.1
coord: 91..124
e-value: 3.6E-5
score: 24.4
coord: 170..208
e-value: 5.3E-8
score: 33.4
coord: 213..250
e-value: 1.3E-8
score: 35.3
coord: 6..40
e-value: 0.003
score: 18.3
coord: 131..166
e-value: 1.6E-9
score: 38.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 9..43
score: 8.737
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 176..217
score: 14.519
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 218..259
score: 17.927
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 260..291
score: 13.951
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 92..133
score: 14.017
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 50..81
score: 15.755
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 134..175
score: 16.39
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..87
e-value: 7.7E-22
score: 79.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 211..306
e-value: 1.8E-29
score: 105.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 88..210
e-value: 1.4E-44
score: 154.2
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 237..251
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 195..209
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 153..167
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 9..301
score: 74.427
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig911contigF-serratus_M_contig911:140603..146010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig911.20539.1mRNA_F-serratus_M_contig911.20539.1Fucus serratus malemRNAF-serratus_M_contig911 140295..147366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig911.20539.1 ID=prot_F-serratus_M_contig911.20539.1|Name=mRNA_F-serratus_M_contig911.20539.1|organism=Fucus serratus male|type=polypeptide|length=651bp
MDPELERTFRDHGASVNAVSYSPNMKQLVSAADSKLMLWSFRSQLRALPF
KGHTGTVHHVEFSPDGALMASASRDRTVRLWMPSARGGSSVLKSHMGGVR
HASFARSGRLLITASDDKTIKIWSVPSKKFMCTLTGHNNWVRCATFSPDS
RLATSCGDDKTVRLWDVQTRKCLHTFFDHDGSVRQTRFSPDGTCVASCSA
DKTIKLWDTRSHKLLQHYRAHDDDVTSLSFHESGNFLLSSSADASIKIWD
LREGRLAYTLKGHSGSVRACAFSPDGTLFASGGRDGVVMSWRSHLATKFV
GVGEGSGASKEATVPKGDFDVSGEGNGHGRLANGAGRGVTQEGGRRRTAL
GVRTTNSRSPGESVRERRRGSGGRARQPESAHPTGDGTLGRTPRVRDEDY
FLGEKPPAMDAAGTSDAFEYTASSYSRDDSHREFPPFGDIDSSGGGSSQR
RFVDDQQVRLDIGDLDETPRGVAFLSEATAVRGTSRLSVGYRPSLRETTV
APVDTMREAGAAVGWDTGIHGEWRAERNAPVNDPIGGDEVAVAAAAALDG
KSSGMALDERVGSTVSEEVKRYERTRGFVSNDRGGVAEGDAYHRGALPEG
LAGTLEHIVGQLDMLTRTVEVLEKRLAFTEDRLQSGGVGCACGSAVDRGV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf