prot_F-serratus_M_contig908.20488.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig908.20488.1
Unique Nameprot_F-serratus_M_contig908.20488.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length164
Homology
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI)

HSP 1 Score: 100 bits (248), Expect = 2.010e-21
Identity = 66/189 (34.92%), Postives = 96/189 (50.79%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVK--KKAKIPAALGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G+A Y +G  I R R  R L   Q + +++I+KR++++  K+  +P   GV TLS+ D P+ PEE+E M + PY  AVGA+M+T T TR D+A A                        YL  TK+  + YG     L ++ YTD+ F +  D  +S+SG V     GA+SW S  Q      T E E
Sbjct:  536 LGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGESE--LKLKGYTDASFASDKDDSKSISGYVFTLNGGAVSWKSSKQATVADSTTEAE 721          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI)

HSP 1 Score: 98.6 bits (244), Expect = 7.230e-21
Identity = 65/189 (34.39%), Postives = 95/189 (50.26%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVK--KKAKIPAALGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G+A Y +G  I R R  R L   Q + +++I+KR++++  K+  +P   GV TLS+ D P+ PEE+E M + PY  AVGA+M+T T TR D+A A                        YL  TK+  + YG     L ++ YTD+ F +  D  +S+SG V     G +SW S  Q      T E E
Sbjct:  930 LGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGESE--LKLKGYTDASFASDKDDSKSISGYVFTLNGGTVSWKSSKQATVADSTTEAE 1115          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR)

HSP 1 Score: 96.7 bits (239), Expect = 2.580e-20
Identity = 64/189 (33.86%), Postives = 96/189 (50.79%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVKKKAK--IPAALGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G+A Y +G  I R R  R L   Q + +++I+KR++++K  +  +P  +GV +LS+ + P+  EE+E M + PY  AVGA+M+T T TR D+A A                        YL  TK+  + YG     L ++ YTD+ F +  D  +S+SG V     GAISW S  Q      T E E
Sbjct:  319 LGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGV-SLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGNSE--LSLKGYTDASFASDKDDSKSISGYVFTLNGGAISWKSSKQATVADSTTEAE 504          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A225VGP7_9STRA (Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VGP7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 7.940e-20
Identity = 63/189 (33.33%), Postives = 99/189 (52.38%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVKKKAKI--PAALGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G+  + +G  I+R R AR+L  +Q   +++I+KRF+++  A +  P A G   L+K   P + E   +M K P+R+AVG+LM+    +R DIA A                        YL  T+++G+ + G    + ++ +TDSD+ AC D RRSVSG V M  +  I+W SR Q +    T E E
Sbjct:  385 LGEVSFILGLKISRDRAARKLWINQQSNVDTILKRFNMEHGAGVATPTAAGK-KLTKLQSPTSEETMSKMLKKPFRQAVGSLMYQMIGSRPDIAFAIQDVSRYMANYGEAHWEAVKRCLRYLKATRDYGLEFSGDA--VVLKAFTDSDYAACEDDRRSVSGYVTMIGQCTITWSSRRQRIVAQSTAEAE 570          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A4Y9XUY7_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XUY7_9APHY)

HSP 1 Score: 95.1 bits (235), Expect = 1.180e-19
Identity = 65/188 (34.57%), Postives = 90/188 (47.87%), Query Frame = 0
Query:    2 GDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVKKKAKIPAALGVPT-LSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIA------------------------CAYLLHTKEWGITY-GGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            G+ +Y +G  I R R  + ++  Q    E I+ RF +K    +   L   + LSK  EP   E++ EM K PYREA+GA+M+ A  TR D++                          Y+  T  +GIT+ G    GL   +Y+D+  G C DT RS  G V+M   G +SW SR QEV T  T E E
Sbjct: 1136 GEFKYMLGVLIERDRGQKTMRLSQRAYAERILDRFGMKDANPVGTPLEPGSKLSKEAEPVTAEQRAEMDKIPYREALGAVMYLAVATRPDLSYPIQLLSRFMANPGYSHWRALKRVLRYIKGTLNYGITFDGNHPAGLQPTIYSDASQGDCADTGRSTHGHVVMMAGGPVSWSSRRQEVVTLSTTEAE 1323          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A8H6Y342_9AGAR (Transcription factor n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Y342_9AGAR)

HSP 1 Score: 92.0 bits (227), Expect = 2.180e-19
Identity = 67/189 (35.45%), Postives = 92/189 (48.68%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVKKKAKIPAALGVPTLSKADE--PRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G   + +G  I R R+A  +   Q   +ESI++RF+    AK  A    P +    E  P++  +   MK+ PYREAVG+LMW A  TR DIA                          YL  TK+W +TYG    GL  E Y+D+D G   + RR++SG   +   GAISW S+ QE+ T  T E E
Sbjct:    4 LGPVSWLLGIQIARNREAHMISLSQQSYLESILERFNFAD-AKPLAMPMDPNVQLTTEHCPKSIRDIAAMKRIPYREAVGSLMWAAVGTRPDIAFVVGVLSKYLNNPGPTHWEAVKRVFRYLQGTKDWRLTYGAGKAGL--EGYSDAD-GMSQENRRAISGYAFIIDGGAISWSSKKQELVTLSTTEAE 188          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY)

HSP 1 Score: 90.9 bits (224), Expect = 2.490e-18
Identity = 65/189 (34.39%), Postives = 96/189 (50.79%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVK--KKAKIPAALGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G+  + +G  + R R+AR L   QH  ++SI+ RF+    K + IP    +  L+K+  P +  +   M+K PYREA+G+LM+ A  TR DI+ A                        YLL TK   + YGG   GL  E Y D+D GA  + R +++G V +   GA+SW S+ QE+ T  T E E
Sbjct:  174 LGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNL-QLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGL--EGYVDAD-GASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAE 358          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY)

HSP 1 Score: 90.9 bits (224), Expect = 3.550e-18
Identity = 65/189 (34.39%), Postives = 96/189 (50.79%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVK--KKAKIPAALGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G+  + +G  + R R+AR L   QH  ++SI+ RF+    K + IP    +  L+K+  P +  +   M+K PYREA+G+LM+ A  TR DI+ A                        YLL TK   + YGG   GL  E Y D+D GA  + R +++G V +   GA+SW S+ QE+ T  T E E
Sbjct: 1191 LGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNL-QLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGL--EGYVDAD-GASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAE 1375          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU)

HSP 1 Score: 88.2 bits (217), Expect = 2.090e-17
Identity = 65/189 (34.39%), Postives = 93/189 (49.21%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVKKKAKIPAALGVPT--LSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G   + +G  ++R   A  L   QH  +E+I+ RF+      I   +  PT  LSK+  P +  +   M++ PY+EA+G+LM+ A  TR DIA A                        YLL TK   + YGG   GL  E Y D+D GA  + RR+++G V +   GAISW S+ QE+ T  T E E
Sbjct:  152 LGPVSWLLGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMD-PTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAVSTLAQFSQNPGWVHWEAVKRVFRYLLGTKTLSLIYGGGQRGL--EGYVDAD-GASQEHRRAITGYVFLVDGGAISWSSKKQELVTLSTAESE 336          
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Match: A0A2G8SFR3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SFR3_9APHY)

HSP 1 Score: 88.2 bits (217), Expect = 3.090e-17
Identity = 63/188 (33.51%), Postives = 92/188 (48.94%), Query Frame = 0
Query:    1 MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVKKKAKIPAALGVPT-LSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACA------------------------YLLHTKEWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSRMQEVTTSGTLEVE 163
            +G   + +G  +TR  +AR L   QH  ++SI+ RF+      I   +     LSK   P +  +   MK+ PYREA+GALM+ A  TR DIA A                        YL+ T+   + YGG   GL  E + D+D G+  + RR+++G V +   GA+SW S+ QE+ T  T E E
Sbjct: 1238 LGPVSWVLGIKVTRDLEARTLSLSQHSYIDSIITRFNFDDLKPISTPMDPHLQLSKTQCPESALDVARMKRVPYREAIGALMYAAMGTRPDIAFAVSTLAQYSENPGWTHWEAVKRVFRYLVGTRHLSLVYGGGKDGL--EGFVDAD-GSSQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESE 1422          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig908.20488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438K5H3_VITVI2.010e-2134.92Retrovirus-related Pol polyprotein from transposon... [more]
A0A438JH99_VITVI7.230e-2134.39Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3MAN7_TRIPR2.580e-2033.86Retrotransposon protein putative Ty1-copia subclas... [more]
A0A225VGP7_9STRA7.940e-2033.33Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4... [more]
A0A4Y9XUY7_9APHY1.180e-1934.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H6Y342_9AGAR2.180e-1935.45Transcription factor n=1 Tax=Mycena sanguinolenta ... [more]
A0A4S4K468_9APHY2.490e-1834.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2R6PCF8_9APHY3.550e-1834.39Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]
A0A1M2VSW8_TRAPU2.090e-1734.39Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G8SFR3_9APHY3.090e-1733.51Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig908contigF-serratus_M_contig908:50485..51048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig908.20488.1mRNA_F-serratus_M_contig908.20488.1Fucus serratus malemRNAF-serratus_M_contig908 50215..51081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig908.20488.1 ID=prot_F-serratus_M_contig908.20488.1|Name=mRNA_F-serratus_M_contig908.20488.1|organism=Fucus serratus male|type=polypeptide|length=164bp
MGDAEYYMGCHITRIRKARELKFDQHLCMESIVKRFDVKKKAKIPAALGV
PTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATMTRSDIACAYLLHTK
EWGITYGGQGCGLCMEVYTDSDFGACLDTRRSVSGAVLMPTKGAISWPSR
MQEVTTSGTLEVE*
back to top