prot_F-serratus_M_contig905.20472.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig905.20472.1
Unique Nameprot_F-serratus_M_contig905.20472.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length47
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: I6TIF7_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=11 Tax=Sargassaceae TaxID=3014 RepID=I6TIF7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 3.490e-15
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFL ICTFRLYL
Sbjct:   97 MSDSVYGSVFFMATGFHGFHVIIGTIFLSICTFRLYL 133
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: A0A2R4QQ89_9PHAE (Cytochrome c oxidase subunit 3 n=8 Tax=Fucales TaxID=3009 RepID=A0A2R4QQ89_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 3.640e-15
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL
Sbjct:  195 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 231
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: H6UKQ8_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=4 Tax=Sargassaceae TaxID=3014 RepID=H6UKQ8_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 4.080e-15
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFL ICTFRLYL
Sbjct:  119 MSDSVYGSVFFMATGFHGFHVIIGTIFLSICTFRLYL 155
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: A0A068ACI2_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=45 Tax=Sargassaceae TaxID=3014 RepID=A0A068ACI2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 4.350e-15
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFL +CTFRLYL
Sbjct:   98 MSDSVYGSVFFMATGFHGFHVIIGTIFLFVCTFRLYL 134
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: A0A068ACL1_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=3 Tax=Sargassum TaxID=3015 RepID=A0A068ACL1_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 4.830e-15
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFL +CTFRLYL
Sbjct:  111 MSDSVYGSVFFMATGFHGFHVIIGTIFLSVCTFRLYL 147
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: A0A7G4YMB7_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=48 Tax=Sargassaceae TaxID=3014 RepID=A0A7G4YMB7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 9.400e-15
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFL ICTFRLYL
Sbjct:  132 MSDSVYGSVFFMATGFHGFHVIIGTIFLSICTFRLYL 168
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: T2DR71_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=56 Tax=Sargassaceae TaxID=3014 RepID=T2DR71_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.060e-14
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFL ICTFRLYL
Sbjct:  161 MSDSVYGSVFFMATGFHGFHVIIGTIFLSICTFRLYL 197
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: J9JEF7_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=4 Tax=Carpophyllum TaxID=590102 RepID=J9JEF7_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.130e-14
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGT+FL +CTFRLYL
Sbjct:  118 MSDSVYGSVFFMATGFHGFHVIIGTLFLSVCTFRLYL 154
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: M1LFT0_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=Sargassaceae TaxID=3014 RepID=M1LFT0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.280e-14
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFL ICTFRLYL
Sbjct:  177 MSDSVYGSVFFMATGFHGFHVIIGTIFLSICTFRLYL 213
[Close]
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Match: B7SB14_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=3 Tax=Sargassum TaxID=3015 RepID=B7SB14_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.660e-14
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 
Query:    1 MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYL 37
            MSDSVYGSVFFMATGFHGFHVIIGTIFL IC FRLYL
Sbjct:  110 MSDSVYGSVFFMATGFHGFHVIIGTIFLSICAFRLYL 146
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig905.20472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I6TIF7_9PHAE3.490e-1597.30Cytochrome c oxidase subunit 3 (Fragment) n=11 Tax... [more]
A0A2R4QQ89_9PHAE3.640e-15100.00Cytochrome c oxidase subunit 3 n=8 Tax=Fucales Tax... [more]
H6UKQ8_9PHAE4.080e-1597.30Cytochrome c oxidase subunit 3 (Fragment) n=4 Tax=... [more]
A0A068ACI2_9PHAE4.350e-1594.59Cytochrome c oxidase subunit 3 (Fragment) n=45 Tax... [more]
A0A068ACL1_9PHAE4.830e-1594.59Cytochrome c oxidase subunit 3 (Fragment) n=3 Tax=... [more]
A0A7G4YMB7_9PHAE9.400e-1597.30Cytochrome c oxidase subunit 3 (Fragment) n=48 Tax... [more]
T2DR71_9PHAE1.060e-1497.30Cytochrome c oxidase subunit 3 (Fragment) n=56 Tax... [more]
J9JEF7_9PHAE1.130e-1491.89Cytochrome c oxidase subunit 3 (Fragment) n=4 Tax=... [more]
M1LFT0_9PHAE1.280e-1497.30Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=... [more]
B7SB14_9PHAE2.660e-1494.59Cytochrome c oxidase subunit 3 (Fragment) n=3 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleGENE3D1.20.120.80coord: 1..45
e-value: 2.4E-12
score: 48.9
IPR000298Cytochrome c oxidase subunit III-likePFAMPF00510COX3coord: 1..36
e-value: 1.2E-13
score: 51.5
IPR000298Cytochrome c oxidase subunit III-likePROSITEPS50253COX3coord: 1..46
score: 10.435
IPR024791Cytochrome c oxidase subunit IIIPANTHERPTHR11403CYTOCHROME C OXIDASE SUBUNIT IIIcoord: 1..38
NoneNo IPR availablePANTHERPTHR11403:SF7CYTOCHROME C OXIDASE SUBUNIT 3coord: 1..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
IPR035973Cytochrome c oxidase subunit III-like superfamilySUPERFAMILY81452Cytochrome c oxidase subunit III-likecoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig905contigF-serratus_M_contig905:65897..66037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig905.20472.1mRNA_F-serratus_M_contig905.20472.1Fucus serratus malemRNAF-serratus_M_contig905 65316..66037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig905.20472.1 ID=prot_F-serratus_M_contig905.20472.1|Name=mRNA_F-serratus_M_contig905.20472.1|organism=Fucus serratus male|type=polypeptide|length=47bp
MSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYLCYAVESVRA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013833Cyt_c_oxidase_su3_a-hlx
IPR000298Cyt_c_oxidase-like_su3
IPR024791Cyt_c/ubiquinol_Oxase_su3
IPR035973Cyt_c_oxidase_su3-like_sf