prot_F-serratus_M_contig902.20444.1 (polypeptide) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: A0A6H5L770_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L770_9PHAE) HSP 1 Score: 226 bits (576), Expect = 3.500e-72 Identity = 119/216 (55.09%), Postives = 148/216 (68.52%), Query Frame = 0
Query: 1 MDASDASPDGSNRGEVGIAAARYVYGPANVNLLPCKVHHTGSAPVSTYFRPQPPKDSKNM---------TPVADKVKENGIAGDG-----KSSNGDKSQPATVA---------REGKGEETWVQLEDDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPCPEGLQD--EDVTAFWAAETSFRDITVWGHDEIRRQSTVDRCLTWLEVSNSIHDP 191
MD AS D +R EVGI AAR+VYGPA+V+LLPCK+HHTG APV+TYFRP P K+++N T +AD+ NG+ GDG ++ G VA G++ W EDD+ EHTARFRGRK +GRKVELP G+HGVVLRE+PCP G+++ EDV ++WAAETSFR++TVWGHD+ RR+STVDR L WLEVS SIHDP
Sbjct: 1 MDTYSASSDTHSRCEVGIGAARHVYGPASVHLLPCKIHHTGPAPVATYFRPSPAKENRNSDTTAAAPTATALADETGNNGV-GDGAARKTSTAPGSGENAKLVAXXXXXXXXGESAVGDQKWELFEDDSAEHTARFRGRKFVGRKVELPKGVHGVVLREKPCPPGVRENNEDVASYWAAETSFREVTVWGHDQPRRESTVDRSLAWLEVSKSIHDP 215
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: D8LTC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC6_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.810e-44 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 0
Query: 95 GEETWVQLEDDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPCPEGLQD--EDVTAFWAAETSFRDITVWGHDEIRRQSTVDRCLTWLEVSNSIHDP 191
G++ W EDD+ EHTARFRGRK +GRKVELP G+HGVVLRE+PCP G+++ EDV ++WAAETSFR++TVWGHD+ R++STVDR L WLEVS SIHDP
Sbjct: 105 GDQKWELFEDDSAEHTARFRGRKFVGRKVELPKGVHGVVLREKPCPPGVRENNEDVASYWAAETSFREVTVWGHDQPRQESTVDRSLAWLEVSKSIHDP 203
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: A0A6J0JIT6_RAPSA (ribonuclease H2 subunit C isoform X1 n=3 Tax=Brassiceae TaxID=981071 RepID=A0A6J0JIT6_RAPSA) HSP 1 Score: 59.3 bits (142), Expect = 9.390e-8 Identity = 30/95 (31.58%), Postives = 43/95 (45.26%), Query Frame = 0
Query: 104 DDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPCP------EGLQDEDVTAFWAAETSFRDITVWGHDEI-RRQSTVDRCLTWLEVSNSIHDP 191
D + A FRGRKL G + LPTG G VL + + D + W A+ F +T W HD + + T+ R W +S ++H P
Sbjct: 52 DGVRAEEAHFRGRKLQGATISLPTGYSGFVLGQASNKNANGKRKASSDTEENPCWEAKAKFDKVTYWNHDSLPSKDDTILRSFHWFSISEALHKP 146
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: A0A0D3BQL3_BRAOL (Uncharacterized protein n=5 Tax=Brassica TaxID=3705 RepID=A0A0D3BQL3_BRAOL) HSP 1 Score: 55.8 bits (133), Expect = 1.700e-6 Identity = 27/95 (28.42%), Postives = 43/95 (45.26%), Query Frame = 0
Query: 104 DDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPCP------EGLQDEDVTAFWAAETSFRDITVWGHDEI-RRQSTVDRCLTWLEVSNSIHDP 191
D + A FRGRKL G + +P+G G VL + + DE+ W + F +T W HD + + T+ R W ++ ++H P
Sbjct: 52 DGVRTEEAHFRGRKLQGATISMPSGYSGFVLGQASNKNANGKRKACSDEEENPCWEVKAKFDKMTYWNHDTLPSKDDTILRSFHWFSIAEALHKP 146
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: A0A078IW19_BRANA (BnaA05g34570D protein n=5 Tax=Brassica TaxID=3705 RepID=A0A078IW19_BRANA) HSP 1 Score: 55.8 bits (133), Expect = 1.730e-6 Identity = 32/113 (28.32%), Postives = 53/113 (46.90%), Query Frame = 0
Query: 86 PATVAREGKGEETWVQLEDDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPCP------EGLQDEDVTAFWAAETSFRDITVWGHDEI-RRQSTVDRCLTWLEVSNSIHDP 191
PA V+ K + + V++ D + A FRGRKL G + +P+G G VL + + DE+ W + F +T W HD + + T+ R W ++ ++H P
Sbjct: 35 PAQVSNYFKPKSSEVEV-DGVRTEEAHFRGRKLQGATILMPSGYSGFVLGQASNKNANGKRKACSDEEENPCWEVKAKFDKMTYWNHDTLPSKDDTILRSFHWFNIAEALHKP 146
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: A0A384LFC3_ARATH (Uncharacterized protein n=4 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A384LFC3_ARATH) HSP 1 Score: 55.1 bits (131), Expect = 3.370e-6 Identity = 29/96 (30.21%), Postives = 43/96 (44.79%), Query Frame = 0
Query: 104 DDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPC-------PEGLQDEDVTAFWAAETSFRDITVWGHDEI-RRQSTVDRCLTWLEVSNSIHDP 191
D + A FRGRKL G + LP+G G VLR+ + ED W + F ++T W HD + + T R W ++ ++H P
Sbjct: 51 DGVKTEEAHFRGRKLQGATISLPSGYSGFVLRQASNLNANGKRKASMPTED-NQCWEVKAKFNNLTYWNHDSLPSKDDTFFRSFHWFSIAEALHKP 145
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: UPI0010A37C9B (ribonuclease H2 subunit C-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A37C9B) HSP 1 Score: 53.9 bits (128), Expect = 9.520e-6 Identity = 34/111 (30.63%), Postives = 57/111 (51.35%), Query Frame = 0
Query: 86 PATVAREGKGEETWVQLEDDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPCPE----GLQDEDVTAFWAAETSFRDITVWGHDEIRRQST-VDRCLTWLEVSNSIHDP 191
PA+V+ K + T +++E + A FRGRKL G + LP+G G VL ++ E + + W + +F++IT W HD + Q+ R WL ++ ++H P
Sbjct: 44 PASVSHYFKPKSTGIEVEGLPLQE-AYFRGRKLDGTTILLPSGYRGFVLGKKSQDEKNSSAASYSENSNSWEMKATFQNITYWNHDCLPSQNDDFMRAFHWLTIAKALHTP 153
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: A0A1J3D346_NOCCA (Ribonuclease H2 subunit C n=3 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A1J3D346_NOCCA) HSP 1 Score: 53.5 bits (127), Expect = 1.240e-5 Identity = 28/95 (29.47%), Postives = 42/95 (44.21%), Query Frame = 0
Query: 104 DDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPCP------EGLQDEDVTAFWAAETSFRDITVWGHDEI-RRQSTVDRCLTWLEVSNSIHDP 191
D + A FRGRKL G + LP+G G VL + + E+ W A+ F +T W HD + + T R W ++ ++H P
Sbjct: 51 DGVRTEEAHFRGRKLQGATISLPSGYSGFVLGQASNRNANGKRKASSPEEEKPCWEAKAKFDKVTYWNHDTLPSKDDTFLRSFHWFSIAEALHKP 145
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: A0A1J3HLL5_NOCCA (Ribonuclease H2 subunit C (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3HLL5_NOCCA) HSP 1 Score: 53.5 bits (127), Expect = 2.150e-5 Identity = 28/95 (29.47%), Postives = 42/95 (44.21%), Query Frame = 0
Query: 104 DDTQEHTARFRGRKLIGRKVELPTGIHGVVLREQPCP------EGLQDEDVTAFWAAETSFRDITVWGHDEI-RRQSTVDRCLTWLEVSNSIHDP 191
D + A FRGRKL G + LP+G G VL + + E+ W A+ F +T W HD + + T R W ++ ++H P
Sbjct: 93 DGVRTEEAHFRGRKLQGATISLPSGYSGFVLGQASNRNANGKRKASNPEEEKPCWEAKAKFDKVTYWNHDTLPSKDDTFLRSFHWFSIAEALHKP 187
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Match: A0A5N5CVD5_9PEZI (Uncharacterized protein n=1 Tax=Lasiodiplodia theobromae TaxID=45133 RepID=A0A5N5CVD5_9PEZI) HSP 1 Score: 52.8 bits (125), Expect = 2.150e-5 Identity = 34/111 (30.63%), Postives = 51/111 (45.95%), Query Frame = 0
Query: 96 EETWVQLEDDTQEHTARFRGRKLIGRKVELPTGIHGVVL-------------REQPCPEGLQDEDVTAFWAAETS-FRDITVWGHDEI--RRQSTVDRCLT-WLEVSNSIH 189
E W E+D + TA FRGRKL GRK++LP G G VL R E +DE + E F ++ VWGH+ + + + ++ W+ + +IH
Sbjct: 33 ERYWRPEEEDDGKQTAHFRGRKLRGRKLQLPDGYRGSVLSSTNKVLPQSEGDRGTEAEEDEEDERIEVRLMEEVGEFDEVVVWGHEVVPDETEDAYSKGISEWISFAEAIH 143 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 19
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig902.20444.1 ID=prot_F-serratus_M_contig902.20444.1|Name=mRNA_F-serratus_M_contig902.20444.1|organism=Fucus serratus male|type=polypeptide|length=192bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|