prot_F-serratus_M_contig814.19556.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig814.19556.1
Unique Nameprot_F-serratus_M_contig814.19556.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length340
Homology
BLAST of mRNA_F-serratus_M_contig814.19556.1 vs. uniprot
Match: D8LM33_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM33_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 5.540e-128
Identity = 201/340 (59.12%), Postives = 246/340 (72.35%), Query Frame = 0
Query:    3 SGARVDEFDNQLNDPGQYDNSQEPASLSVVEHIRALSLRGKLTLAYIICVLLFLLFKTTWVFAFVTAVAFAVSAALLLSWWNRIRSSCPLDLVVRSFGVGLIGMFWAVMFVFYFAXXXXXXXXXXXXXXXXXXXVVFI---GLEEMFKVIFVVWSKRGVAIERETKAHQIAATATSLGYAVGFTFMIVTVEDINFDAGTSIKPGSLGELEVATICLIIVTLFGTPMHLLSGYLIGLEVTRQTTFMKVGLFTFLLRSLYILNIILWLSLLHQWFTLLIGLLTSNILICAAMVWRIKRVESTLSIEYLQRVGNLQAFGYGVLPGGDADEVELSSTCNANNSV 339
            +GA VDEFDNQLNDPGQYDN Q+PASLSVVEH+RALS+RGKLTL Y+  V++F+L+   WV AF    +F VSAA L  WW+RIR SCPLDLVVRSFG+G+  M W V  +F                      VV +   GLEEM KV+F  WSKR VAI RETKAHQIAATATS+GY+VGF+F ++ V D+  D    I+  S  ++ VA + L+I T+FGTPMH+LSGYL+GLEVTRQT FMKV L+TFL+RSL+++NI LW+ L   W  ++ GLL +N+LIC AMV RIK+VE+TL +EYLQRVG LQAFGYGVLPGGD DEVE+ S  + N  V
Sbjct:    6 NGADVDEFDNQLNDPGQYDNPQDPASLSVVEHLRALSIRGKLTLLYVAGVIVFVLWALDWVIAFACMASFLVSAAPLFVWWSRIRFSCPLDLVVRSFGLGIFAMVWVVYMLFRLCSTGLMGRLLYMMFGRLVGVVVLVILVGLEEMVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVLDLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGYGVLPGGDVDEVEIPSNVDVNTLV 345          
BLAST of mRNA_F-serratus_M_contig814.19556.1 vs. uniprot
Match: A0A836CLE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE4_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.490e-41
Identity = 120/335 (35.82%), Postives = 162/335 (48.36%), Query Frame = 0
Query:   32 VEHIRALSLRGKLTLAYIICVLLFLLFKTTWVFAFVTAVAFAVSAALLLSWWNRIRSSCPLDLVVRSFGVGLIGMFWAVMFVF---YFAXXXXXXXXXXXXXXXXXXXVVFIGLEEMFKVIFVVWSKRGVAIERETKAHQIAATATSLGYAVG---FTFMIVTV--------EDINFDAGTSIKPGSLGELEVATICLIIVTLFGTPMHLLSGYLIGLEVTRQTTFMKVGLFTFLLRSLYILNIILWLSLLHQWFTLLIGLLTSNILICAAMVWRIKRVESTLSIEYLQRVGNLQAFGYG-----------------------VLPGGDADEVEL 329
            +E ++ALSL  KLT+ Y++      L     V      VA A     LL WW +   +CPLD+V+RSFG+G  GM   V+      +                     +  +G+EE+F+V+     K G+ + RET  HQIA TATS+GYA       F+++           DI+ D      P    + +VA    +I   F  P+ +L+GY+ GL  TR+  F +VGL  F LRS  ++  ILW  LL  W  L I ++ +NI I   MV RIKRVE+ L  EY QRVG LQAFGYG                       VLPGGD DEVE+
Sbjct:   25 LEQLKALSLTAKLTIVYVLVCAHLTLLSRDLVLYLGCMVAHAALIIPLLKWWQKHSHACPLDMVIRSFGMGYCGMALGVVLTLLLGFMVLILATVALPFMIVLWLGLPIYVVGIEELFRVLIARRLKSGLDMSRETITHQIAYTATSVGYAAASAALNFVVLASLEGYLAGEHDIDPDLSPDGAPAL--DFKVAAAAGLIRMAFSVPVQVLAGYMTGLNTTRRLPFKRVGLEAFALRSALMVLSILWELLLPSWLGL-IAVIGTNIGIVWLMVRRIKRVEAQLPQEYFQRVGYLQAFGYGXXXXXXXXXXXXXXXXXXXXXXXVLPGGDPDEVEI 356          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig814.19556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM33_ECTSI5.540e-12859.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLE4_9STRA1.490e-4135.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 266..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 235..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 292..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..291
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availableTMHMMTMhelixcoord: 167..189
NoneNo IPR availableTMHMMTMhelixcoord: 44..58
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 211..233
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 272..291
NoneNo IPR availableTMHMMTMhelixcoord: 124..146
NoneNo IPR availableTMHMMTMhelixcoord: 97..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig814contigF-serratus_M_contig814:180858..187403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig814.19556.1mRNA_F-serratus_M_contig814.19556.1Fucus serratus malemRNAF-serratus_M_contig814 180622..188690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig814.19556.1 ID=prot_F-serratus_M_contig814.19556.1|Name=mRNA_F-serratus_M_contig814.19556.1|organism=Fucus serratus male|type=polypeptide|length=340bp
MISGARVDEFDNQLNDPGQYDNSQEPASLSVVEHIRALSLRGKLTLAYII
CVLLFLLFKTTWVFAFVTAVAFAVSAALLLSWWNRIRSSCPLDLVVRSFG
VGLIGMFWAVMFVFYFASIMLVRFFGFSLFVACLNFVVFIGLEEMFKVIF
VVWSKRGVAIERETKAHQIAATATSLGYAVGFTFMIVTVEDINFDAGTSI
KPGSLGELEVATICLIIVTLFGTPMHLLSGYLIGLEVTRQTTFMKVGLFT
FLLRSLYILNIILWLSLLHQWFTLLIGLLTSNILICAAMVWRIKRVESTL
SIEYLQRVGNLQAFGYGVLPGGDADEVELSSTCNANNSV*
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