prot_F-serratus_M_contig80.19404.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig80.19404.1
Unique Name	prot_F-serratus_M_contig80.19404.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	124

Homology

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.140e-67
Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 0

Query:    1 MTGKGKGGRGKKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVSK 121
            M+GKGKGGRGKKS +RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 6.660e-67
Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 0

Query:    1 MTGKGKGGRGKKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVSK 121
            M+GKGKGGRGKKS +RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 2.030e-66
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 0

Query:    1 MTGKGKGGRGKKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVS 120
            M+GKGKGGRGKKS S+SSKAGLQFPV RIGR+LK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK S
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS 120

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.040e-65
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 0

Query:    1 MTGKGKGGRGKKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVS 120
            M+GKGKGGRGKKS S+SSKAGLQFPV RIGR+LK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK S
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS 171

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.000e-65
Identity = 105/118 (88.98%), Postives = 111/118 (94.07%), Query Frame = 0

Query:    1 MTGKGKGGRGKKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKK 118
            M+GKGKGGRGKK  SRS+KAGLQFPVGRIGRF+K GKYS RVG G+PVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG  TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.860e-63
Identity = 105/125 (84.00%), Postives = 114/125 (91.20%), Query Frame = 0

Query:    1 MTGKGKGGRG---KKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVSKA 122
            M GKGKGGRG   KKS S+SSKAGLQFPV R+GRFLK G+Y++RVGAG+PVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK + A
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTASA 125

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 194 bits (494), Expect = 3.500e-62
Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 0

Query:    1 MTGKGKGGRG-KKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVSK 121
            M+GKGKGGRG KKS + S+KAGLQFPVGRIGR+L+ GKY+ R+GAG+PVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLGGVTIASGGVLPNIHAVLLPKK +K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: A0A6V1P7M0_HETAK (Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M0_HETAK)

HSP 1 Score: 195 bits (496), Expect = 3.780e-62
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0

Query:    5 GKGGRGKKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVSKA 122
            GK GRGKKS +RSSKAGLQFPVGRIGR+LK G+YS RVGAG+PVYLAAVLEYL AE+LELAGNAARDNKK RIVPRH+QLAVRNDEELNKLLGGVTIA GGVLPNIH VLLPKK   A
Sbjct:   29 GKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTKTA 146

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: A0A7S2GRL8_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRL8_9STRA)

HSP 1 Score: 194 bits (494), Expect = 5.160e-62
Identity = 99/120 (82.50%), Postives = 111/120 (92.50%), Query Frame = 0

Query:    1 MTGKGKGGRGKKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVS 120
            M+GKGKGGRGKKS + S+KAGLQFPVGRIGR+LK GK++ R+GAG+PVYLAAVLEYL AE+LELAGNAARDNKK+RI PRHI LAV+NDEELNKLLGGVTIA GGVLPNIH+VLLPKK S
Sbjct:    1 MSGKGKGGRGKKSTTSSAKAGLQFPVGRIGRYLKQGKFATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIAPRHITLAVKNDEELNKLLGGVTIAGGGVLPNIHSVLLPKKAS 120

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BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 194 bits (492), Expect = 7.060e-62
Identity = 101/122 (82.79%), Postives = 113/122 (92.62%), Query Frame = 0

Query:    1 MTGKGKGGRG-KKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHAVLLPKKVSK 121
            M+GKGKGGRG KKS + S+KAGLQFPVGRIGR+L+ GKY+ R+GAG+PVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLGGVTIASGGVLPNIHA+LLPKK  K
Sbjct:    1 MSGKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKSGK 122

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig80.19404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI9_ECTSI	1.140e-67	89.26	Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
D7G193_ECTSI	6.660e-67	89.26	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A6H5KG79_9PHAE	2.030e-66	90.00	Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7FVQ5_ECTSI	1.040e-65	90.00	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D8LLP0_ECTSI	2.000e-65	88.98	Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8...	[more]
A0A836CG77_9STRA	1.860e-63	84.00	Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A6U2JFS4_9STRA	3.500e-62	83.61	Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep...	[more]
A0A6V1P7M0_HETAK	3.780e-62	85.59	Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=282...	[more]
A0A7S2GRL8_9STRA	5.160e-62	82.50	Histone H2A n=1 Tax=Helicotheca tamesis TaxID=3740...	[more]
A0A448ZH28_9STRA	7.060e-62	82.79	Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 98..116 score: 78.3 coord: 41..56 score: 84.58 coord: 70..84 score: 74.98 coord: 56..69 score: 90.54 coord: 12..34 score: 71.1
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 3..121 e-value: 2.2E-77 score: 273.1
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 2..123 e-value: 1.8E-60 score: 204.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 15..118
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 90..122 e-value: 4.5E-20 score: 71.1
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 10..87 e-value: 1.4E-14 score: 54.5
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 3..121
None	No IPR available	PANTHER	PTHR23430:SF207		coord: 3..121
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 20..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig80	contig	F-serratus_M_contig80:876982..877353 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig80.19404.1	mRNA_F-serratus_M_contig80.19404.1	Fucus serratus male	mRNA	F-serratus_M_contig80 876982..877353 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig80.19404.1 ID=prot_F-serratus_M_contig80.19404.1|Name=mRNA_F-serratus_M_contig80.19404.1|organism=Fucus serratus male|type=polypeptide|length=124bp
MTGKGKGGRGKKSASRSSKAGLQFPVGRIGRFLKGGKYSKRVGAGSPVYL
AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGGVT
IASGGVLPNIHAVLLPKKVSKAT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002119	Histone_H2A
IPR009072	Histone-fold
IPR032454	Histone_H2A_C
IPR007125	Histone_H2A/H2B/H3
IPR032458	Histone_H2A_CS