prot_F-serratus_M_contig80.19384.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig80.19384.1
Unique Nameprot_F-serratus_M_contig80.19384.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length383
Homology
BLAST of mRNA_F-serratus_M_contig80.19384.1 vs. uniprot
Match: A0A6H5L110_9PHAE (NTF2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L110_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.080e-33
Identity = 69/138 (50.00%), Postives = 94/138 (68.12%), Query Frame = 0
Query:    1 MSAKRAPPAPEVIAYHFTRQYYHEVMAKRPSQLYKFYKEESLFSFSSGAKREAPPARGPAEIQAKMDQIGLAGAIVDLECASTEAKTTKGGGILLKTTGVITISGMQPREFCQTMSLSRQRNITVQHAYFVREDAFHF 138
            MS +R  PAP V+  HF +QYY EV++K+P +L++FYK+ES F  +SG K E P + G  +I+AK+  +GL GA VDL C S +A+ ++GGG+LL  TG ITI+   PR+FCQT  L+RQ     +H YFVR D F F
Sbjct:    1 MSTRRGAPAPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVS-GLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSITIANTDPRQFCQTFFLARQHQDNDRHNYFVRNDIFRF 137          
BLAST of mRNA_F-serratus_M_contig80.19384.1 vs. uniprot
Match: D7FJI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI2_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 5.810e-33
Identity = 70/138 (50.72%), Postives = 94/138 (68.12%), Query Frame = 0
Query:    1 MSAKRAPPAPEVIAYHFTRQYYHEVMAKRPSQLYKFYKEESLFSFSSGAKREAPPARGPAEIQAKMDQIGLAGAIVDLECASTEAKTTKGGGILLKTTGVITISGMQPREFCQTMSLSRQRNITVQHAYFVREDAFHF 138
            MS KR  PAP V+  HF +QYY EV++K+P +L++FYK+ES F  +SG K E P + G  +I+AK+  +GL GA VDL C S +A+ ++GGG+LL  TG ITI+   PR+FCQT  L+RQ     +H YFVR D F F
Sbjct:    1 MSTKRGAPAPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVS-GLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSITIANTDPRQFCQTFFLARQHQDNDRHNYFVRNDIFRF 137          
BLAST of mRNA_F-serratus_M_contig80.19384.1 vs. uniprot
Match: A0A7S3Y115_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y115_HETAK)

HSP 1 Score: 77.0 bits (188), Expect = 2.880e-13
Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 0
Query:    3 AKRAPPAPEVIAYHFTRQYYHEVMAKRPSQLYKFYKEESLFSFSSGAKREAP-PARGPAEIQAKMDQIGLAGAIVDLECASTEAKTTKGGGILLKTTGVITIS-GMQPRE-FCQTMSLSRQRNITVQH-------AYFVREDAFHF 138
            A R+PP P  +A  F   YY  V++K+P++L++FYKEES F+F  GA  EA  P  G   I+ K+  +GL GA V++   S +A+ ++ GG+++  TG I ++ G QP + F QT  L+ Q  + VQ        +YFV  D   F
Sbjct:    2 AARSPP-PSTVATSFVAHYY-RVLSKKPAELFRFYKEESSFTF--GAPGEAAEPVTGIEAIKTKITGLGLEGAKVEVGQGSVDAQASRDGGVVMLVTGTIALATGQQPAQAFAQTFFLAPQ--VVVQQGRTAPVPSYFVLNDTLRF 141          
BLAST of mRNA_F-serratus_M_contig80.19384.1 vs. uniprot
Match: A0A5D6XNZ4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNZ4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.720e-12
Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = 0
Query:   10 PEVIAYHFTRQYYHEVMAKRPSQLYKFYKEESLFSFSSGAKREAPPARGPAEIQAKMDQIGLAGAIVDLECASTEAKTTKGGGILLKTTGVITIS-GMQPREFCQTMSLSRQRNITVQHAYFVREDAFHFKE 140
            P V+   F RQYY +++AK P  L++FYK+ESL+S ++G++ + P A G   I  ++ +   AGA VDL+  S + + +  GG+ +  TGV+T++ G  P+ F QT  L+ Q N      YFV  D   F E
Sbjct:    5 PSVVGNAFMRQYY-QLLAKEPQSLHRFYKDESLWSHTTGSQMQEPIA-GQKAINEQILKRAYAGARVDLDQGSIDCQESLNGGVFVLVTGVMTLADGAAPKPFVQTFFLATQPN-----GYFVLNDCLRFLE 129          
BLAST of mRNA_F-serratus_M_contig80.19384.1 vs. uniprot
Match: A0A5B8MN34_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MN34_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 6.980e-7
Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = 0
Query:   11 EVIAYHFTRQYYHEVMAKRPSQLYKFYKEESLFSFS--SGAKREAPPARGPAEIQAKMDQIGLAGAIVDLECASTEAKTTKGGGILLKTTGVITISGMQ-PREFCQTMSLSRQRNITVQHAYFVREDAF 136
            + +A  F +QYYH V++  P+ L++FY + S  S S   G        RG   I  K+  +GL GA+  +   S +A+T+  GG+++ TTG +T+ G   PR F Q   L++Q     +H Y+V  D F
Sbjct:   30 KTVATQFVKQYYH-VLSNFPATLHRFYTDASTLSHSVVGGETMLVQTQRG---IHEKVVGLGLEGAVPQI--LSVDAQTSLNGGVVVHTTGFLTLQGTTTPRPFAQVFFLAQQ-----EHGYYVLNDLF 147          
BLAST of mRNA_F-serratus_M_contig80.19384.1 vs. uniprot
Match: L8HE56_ACACA (Nuclear transport factor 2 (Ntf2) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HE56_ACACA)

HSP 1 Score: 62.0 bits (149), Expect = 8.830e-7
Identity = 43/135 (31.85%), Postives = 69/135 (51.11%), Query Frame = 0
Query:    9 APEVIAYHFTRQYYHEVMAKRPSQLYKFYKEESLFSFSSGAKREAPPAR--GPAEIQAKMDQIGLAGAIVDLECASTEAKTTKGGGILLKTTGVITI---SGMQPREFCQTMSLSRQRNITVQHAYFVREDAFHF 138
            +P ++  HF   YY  ++   P  LYKFYK++S++SF +  +  +P +   G + I  K+  +G   + V L     +A+ T GGG+LL   G IT    +   PR+F QT  L++Q        Y+VR D   +
Sbjct:    7 SPALVGKHFIMNYY-TILHDEPQSLYKFYKDDSVYSFGTEGEPLSPESTVTGQSNINEKIASLGFKKSKVHLSVM--DAQPTLGGGVLLMVKGTITNETGNAPSPRKFVQTFLLAQQPT-----GYYVRNDILRY 133          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L110_9PHAE1.080e-3350.00NTF2 domain-containing protein (Fragment) n=1 Tax=... [more]
D7FJI2_ECTSI5.810e-3350.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3Y115_HETAK2.880e-1338.36Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5D6XNZ4_9STRA6.720e-1237.88Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A5B8MN34_9CHLO6.980e-734.11Hypothetical protein n=1 Tax=Chloropicon primus Ta... [more]
L8HE56_ACACA8.830e-731.85Nuclear transport factor 2 (Ntf2) domain containin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..179
NoneNo IPR availableGENE3D3.10.450.50coord: 3..143
e-value: 5.4E-22
score: 80.3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 242..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..219
NoneNo IPR availableTMHMMTMhelixcoord: 219..241
IPR002075Nuclear transport factor 2PFAMPF02136NTF2coord: 14..137
e-value: 2.3E-13
score: 50.8
IPR039539Ras GTPase-activating protein-binding proteinPANTHERPTHR10693RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEINcoord: 4..168
IPR018222Nuclear transport factor 2, eukaryotePROSITEPS50177NTF2_DOMAINcoord: 13..138
score: 18.336
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 10..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig80contigF-serratus_M_contig80:494956..511418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig80.19384.1mRNA_F-serratus_M_contig80.19384.1Fucus serratus malemRNAF-serratus_M_contig80 491827..512343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig80.19384.1 ID=prot_F-serratus_M_contig80.19384.1|Name=mRNA_F-serratus_M_contig80.19384.1|organism=Fucus serratus male|type=polypeptide|length=383bp
MSAKRAPPAPEVIAYHFTRQYYHEVMAKRPSQLYKFYKEESLFSFSSGAK
REAPPARGPAEIQAKMDQIGLAGAIVDLECASTEAKTTKGGGILLKTTGV
ITISGMQPREFCQTMSLSRQRNITVQHAYFVREDAFHFKEAFKKKPKPEA
AESLSRKDRRAVEKAVKDGQRRLRKAAREHEKRARLREEEFQRKRMDTDA
TSLTRSAALARTRIGAQKGIWRWLLACVLFFAMLSTALLLASSRSPLCGR
GNAFHSGDRALVPGECIAGATGSRHFGWLPCVSWKPTLVVGGGGELIATR
PDGTRVALGGDTSTEGRKHGFLSRVFAAPVAAPARGSFEARLDRLRRRGG
HVGFTEGGDLYVADSAGRMVWSLAEEVEGEGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002075NTF2
IPR039539Ras_GTPase_bind_prot
IPR018222Nuclear_transport_factor_2_euk
IPR032710NTF2-like_dom_sf