prot_F-serratus_M_contig7548.18811.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7548.18811.1
Unique Nameprot_F-serratus_M_contig7548.18811.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length78
Homology
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: A0A151R4G2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R4G2_CAJCA)

HSP 1 Score: 57.0 bits (136), Expect = 6.570e-8
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
Query:    4 WISDDGASRHMTSSHDLMTNYRECSGI--VRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            WISD GAS HMT +  +++N R+CS I  V    G  LPI G+GD +++  +      + L +V  VP L+ NLLS
Sbjct:   19 WISDTGASNHMTGTSSMLSNIRQCSSIDSVLIGDGSPLPIHGIGDSVIKQKN----ITLPLNNVLLVPNLTKNLLS 90          
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: A0A2K3L0D5_TRIPR (Uncharacterized protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3L0D5_TRIPR)

HSP 1 Score: 56.6 bits (135), Expect = 1.590e-7
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    4 WISDDGASRHMTSSHDLMTNYRECSG--IVRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            WISD GAS HMT    +++N R+CSG   V    G  LPI G+GD  ++  + +    + L  V  VP L+ NLLS
Sbjct:  340 WISDTGASNHMTGKTSMLSNIRQCSGTDFVLIGDGSPLPIHGIGDSFIKQKNTT----LPLHDVLLVPDLTKNLLS 411          
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: A0A2Z6NS08_TRISU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NS08_TRISU)

HSP 1 Score: 55.1 bits (131), Expect = 5.660e-7
Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 0
Query:    4 WISDDGASRHMTSSHDLMTNYRECSGI--VRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            WISD GAS HMT    ++ N R+CSG   V    G  LPI G+GD  ++         + L  V  VP L+ NLLS
Sbjct:  339 WISDTGASNHMTGKTSMLHNIRQCSGTDSVLIGDGSPLPIHGIGDSFIK----QNNITLPLHDVLLVPDLTKNLLS 410          
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: UPI001C79D330 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C79D330)

HSP 1 Score: 54.7 bits (130), Expect = 7.910e-7
Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    1 LESWISDDGASRHMTSSHDLMTNYRECS-GIVRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            +ESW+ D GAS H T+  ++M NY     G V  A G+AL IEG+GD+ +  P+ S      L  V  VP+L  NL+S
Sbjct:  419 IESWVLDSGASFHTTAHREIMQNYVTGDFGKVYLADGEALEIEGMGDVPINLPNGSAWL---LQKVRHVPKLMRNLIS 493          
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: A0A420HHL7_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Erysiphe neolycopersici TaxID=212602 RepID=A0A420HHL7_9PEZI)

HSP 1 Score: 53.5 bits (127), Expect = 1.860e-6
Identity = 24/74 (32.43%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    4 WISDDGASRHMTSSHDLMTNYRECSGIVRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            ++ D  A+RH+     L+TN+++CS IV+     ++ + G+GD+ LRF +++  F +Q  +  ++PQL  N++S
Sbjct:  236 FVFDTAATRHIVCDKRLLTNFQDCSTIVKWGNAKSIQVSGMGDMFLRFKNNTMLFKLQ--NCMYMPQLGFNIIS 307          
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: A0A2K3MQW2_TRIPR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MQW2_TRIPR)

HSP 1 Score: 52.4 bits (124), Expect = 5.090e-6
Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 0
Query:    4 WISDDGASRHMTSSHDLMTNYRECSGI--VRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            WISD GAS HMT +  +++N R+ SG   V    G  LPI G+GD  ++  +      + L  V  VP L+ NLLS
Sbjct:  339 WISDTGASNHMTGTASMLSNIRQSSGTDSVLIGDGSPLPIHGIGDSFIKQKN----ITLPLHDVLLVPDLTKNLLS 410          
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: A0A2Z6LMX1_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LMX1_TRISU)

HSP 1 Score: 52.0 bits (123), Expect = 6.960e-6
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 0
Query:    4 WISDDGASRHMTSSHDLMTNYRECSGI--VRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            WISD GAS HMT +  ++ N R+ SG   V    G  LPI G+GD  ++  +      + L  V  VP L+ NLLS
Sbjct:  339 WISDTGASNHMTGTASMLNNIRQSSGTDSVLIGDGSPLPIHGIGDSFIKQKN----ITLPLHDVLLVPDLTKNLLS 410          
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: A0A7J6VSL4_THATH (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6VSL4_THATH)

HSP 1 Score: 50.4 bits (119), Expect = 2.310e-5
Identity = 23/74 (31.08%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    4 WISDDGASRHMTSSHDLMTNYRECSGIVRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            ++ D  A+RH+     L+TN++ CS IV+     ++ + G+GD+ LRF ++   F ++  +  ++PQL  N++S
Sbjct:  103 FVFDTAATRHIVCDKRLLTNFQNCSTIVKWGNAKSIQVSGMGDMFLRFKNNDMLFKLE--NCMYMPQLGINIIS 174          
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Match: A0A5N5F2G3_9ROSA (Integrase catalytic domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5F2G3_9ROSA)

HSP 1 Score: 49.3 bits (116), Expect = 6.230e-5
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    4 WISDDGASRHMTS---SHDLMTNYRECSGIVRTAGGDALPIEGVGDILLRFPSDSGAFDIQLLSVAFVPQLSHNLLS 77
            W++D GAS HMT+   +  L + Y     +V+TA G+ L +  +G  +++ PS    + I+L SV +VPQL+HNLLS
Sbjct:  316 WLADSGASNHMTADLQNLSLASPYPTTE-LVQTANGEGLTVSHIGSSVIK-PS---TYPIKLNSVLYVPQLTHNLLS 387          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7548.18811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A151R4G2_CAJCA6.570e-842.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3L0D5_TRIPR1.590e-742.11Uncharacterized protein (Fragment) n=1 Tax=Trifoli... [more]
A0A2Z6NS08_TRISU5.660e-742.11Integrase catalytic domain-containing protein (Fra... [more]
UPI001C79D3307.910e-742.31Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A420HHL7_9PEZI1.860e-632.43Uncharacterized protein (Fragment) n=1 Tax=Erysiph... [more]
A0A2K3MQW2_TRIPR5.090e-640.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z6LMX1_TRISU6.960e-640.79Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A7J6VSL4_THATH2.310e-531.08Retrovirus-related pol polyprotein from transposon... [more]
A0A5N5F2G3_9ROSA6.230e-540.26Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7548contigF-serratus_M_contig7548:9262..9495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7548.18811.1mRNA_F-serratus_M_contig7548.18811.1Fucus serratus malemRNAF-serratus_M_contig7548 9262..9495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7548.18811.1 ID=prot_F-serratus_M_contig7548.18811.1|Name=mRNA_F-serratus_M_contig7548.18811.1|organism=Fucus serratus male|type=polypeptide|length=78bp
LESWISDDGASRHMTSSHDLMTNYRECSGIVRTAGGDALPIEGVGDILLR
FPSDSGAFDIQLLSVAFVPQLSHNLLSL
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