prot_F-serratus_M_contig72.18409.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig72.18409.1
Unique Nameprot_F-serratus_M_contig72.18409.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length111
Homology
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.450e-54
Identity = 83/111 (74.77%), Postives = 93/111 (83.78%), Query Frame = 0
Query:    1 LGGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVDCEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVRGFCID 111
            +GGDCDELRIQSTG TD+HEVR HGGS+YFE+TIVTSWD   K+PQ  Y  GRSF+NCVSE  +   C G AQN+ GECRMDIINSE+GYLGY+DSESYGLTWKVRGFC D
Sbjct:  149 IGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKD 259          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 6.030e-54
Identity = 78/110 (70.91%), Postives = 92/110 (83.64%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVDCEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVRGFCID 111
            GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWD   K PQ  Y+ GRSF+NCVSE  +   C+G A+ND GECRMDIINSEMGY+G++D+ESYGLTWKVRGFC D
Sbjct:   41 GGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKD 150          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.510e-53
Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVDCEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWK--------VRGFCID 111
            GGDC++LRIQSTGS D+HEVRGHGGSLYFE+TIVTSWD   K PQ  Y+ GRSF+NCVSE  +  DCEG A+N+ GECRMDIINSE+ YLGY+DSESYG+TWK        VRGFC D
Sbjct:   62 GGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKD 179          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 4.430e-53
Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVDCEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVRGFCID 111
            GGDC++LRIQSTGS D+HEVRGHGGSLYFE+TIVTSWD   K PQ  Y++GRSF+NCVSE  +  DCEG A+N+ GECRMDIINSE+ YLGY+DSESYG+TWKVRGFC D
Sbjct:  513 GGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKD 622          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.650e-51
Identity = 80/119 (67.23%), Postives = 93/119 (78.15%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVDCEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVR---------GFCID 111
            GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWD   K PQ  Y+ GRSF+NCVSE  +   C+GMA+ND GECRMDIINSEMGY+G++DSESYGLTWKVR         GFC D
Sbjct:   86 GGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKD 204          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: D7FZV0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV0_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 5.300e-47
Identity = 72/111 (64.86%), Postives = 86/111 (77.48%), Query Frame = 0
Query:    1 LGGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVDCEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVRGFCID 111
            +GG+C ELRI+ST  +D+ E+RGHGG+LYFE+TIVTSWD D + PQ  Y  GRSFI CVSE  +  D    A N+ GECRMDII+SEMGYLGY  SE+YG+TWKVRGFC D
Sbjct:    3 VGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKGGRSFIRCVSEVLTGEDT--CAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD 111          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.800e-44
Identity = 73/111 (65.77%), Postives = 87/111 (78.38%), Query Frame = 0
Query:    1 LGGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVDCEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVRGFCID 111
            +GG+C ELRI+ST  +D+ E+RGHGG+LYFE+TIVTSWD D + PQ  Y DGRSFI CVSE  +  D    A N+ GECRMDII+SEMGYLGY  SE+YG+TWKVRGFC D
Sbjct:   74 VGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDT--CAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD 182          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 2.250e-37
Identity = 71/112 (63.39%), Postives = 81/112 (72.32%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSE-YASTVD-CEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVRGFCID 111
            GGD   LRIQSTGS DY+E+RGHGGSL F +T VTSWD D K   TNY   RSFI CVSE  A   D C+G A N  GECRMDII SEMG +GY  +ESYG++WKVRG+C +
Sbjct:  466 GGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSE 577          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: A0A6H5KES9_9PHAE (MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES9_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 7.330e-37
Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVD--CEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVRGFCID 111
            GGD DELR+ ST  T +  +R HGGSL F +T V SWD  T SP  +  DGRS+I+ +SE  +  D  CEG A+N  GE RMDI +SE+GYLGY+DSESYGLTWKVRGFC D
Sbjct:   19 GGDADELRLLSTSET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCED 129          
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 5.320e-36
Identity = 68/112 (60.71%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYDDGRSFINCVSEYASTVD--CEGMAQNDYGECRMDIINSEMGYLGYYDSESYGLTWKVRGFCID 111
            GGD DELR+ ST  T Y  +R HGGSL F  T V SWD  T SP  +  DGRS+I+ +SE  +  D  CEG A+N  GE RMDI NSE+GYLG+ DSESYGLTWKVRGFC D
Sbjct:  128 GGDADELRLLSTTDT-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKD 238          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig72.18409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI1.450e-5474.77Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FIU4_ECTSI6.030e-5470.91Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE2.510e-5369.49MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI4.430e-5374.55Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE1.650e-5167.23MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FZV0_ECTSI5.300e-4764.86Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI2.800e-4465.77Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE2.250e-3763.39MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5KES9_9PHAE7.330e-3759.82MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
A0A6H5JU98_9PHAE5.320e-3660.71MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..109
e-value: 2.6E-24
score: 87.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig72contigF-serratus_M_contig72:289973..290305 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig72.18409.1mRNA_F-serratus_M_contig72.18409.1Fucus serratus malemRNAF-serratus_M_contig72 289973..290305 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig72.18409.1 ID=prot_F-serratus_M_contig72.18409.1|Name=mRNA_F-serratus_M_contig72.18409.1|organism=Fucus serratus male|type=polypeptide|length=111bp
LGGDCDELRIQSTGSTDYHEVRGHGGSLYFENTIVTSWDPDTKSPQTNYD
DGRSFINCVSEYASTVDCEGMAQNDYGECRMDIINSEMGYLGYYDSESYG
LTWKVRGFCID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold