prot_F-serratus_M_contig719.18400.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig719.18400.1
Unique Nameprot_F-serratus_M_contig719.18400.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length136
Homology
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BLAST of mRNA_F-serratus_M_contig719.18400.1 vs. uniprot
Match: D8LDE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDE0_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.330e-11
Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:    9 RATAGWLTLALGACCCGG-TIGFVAPSARMRGASALDWQRPAHRFGLVAAPTA-RPRALPRLFSSKGPPHTGGGADIMDSLTGNEREMSTEEKIAALQREVQAQ 110
            RAT   L++AL  C CGG  +GFV P++    +SAL                A RPR   RL+SSK P  +GG  D MDS+ G  RE+STEEKIAALQ+EVQAQ
Sbjct:   13 RATGFLLSVALAVCSCGGGALGFVVPAS----SSALTAXXXXXXXXXXXXXXAVRPRPPSRLYSSKKPTTSGGATDFMDSIGGVGRELSTEEKIAALQKEVQAQ 112
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig719.18400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDE0_ECTSI1.330e-1149.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..135
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score: 6.0
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig719contigF-serratus_M_contig719:285502..295832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig719.18400.1mRNA_F-serratus_M_contig719.18400.1Fucus serratus malemRNAF-serratus_M_contig719 285320..297250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig719.18400.1 ID=prot_F-serratus_M_contig719.18400.1|Name=mRNA_F-serratus_M_contig719.18400.1|organism=Fucus serratus male|type=polypeptide|length=136bp
MRDIPAKGRATAGWLTLALGACCCGGTIGFVAPSARMRGASALDWQRPAH
RFGLVAAPTARPRALPRLFSSKGPPHTGGGADIMDSLTGNEREMSTEEKI
AALQREVQAQARVAEAMAEEEESVETEEGKGRRAQ*
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