prot_F-serratus_M_contig7.18161.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7.18161.1
Unique Nameprot_F-serratus_M_contig7.18161.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length261
Homology
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: D7FJ97_ECTSI (Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ97_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 1.200e-64
Identity = 154/186 (82.80%), Postives = 163/186 (87.63%), Query Frame = 0
Query:   74 ALANIVAGVAVLLAGSGAVLADGSTQKFSLPPISNAKDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            AL   +AG AVL +G  A LADGST KFSLPP+   KDRC+FKSSAMGQANAARDKLYDLR+CD+SG SAAGFDLSGVIASEA+FSKGDFKEVVMSKAYAR      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TEAYMG+FDQ+NLCKNPTLKGTNPVT ADTR S GC
Sbjct:   11 ALGTFLAGAAVLFSGGEAALADGSTTKFSLPPVGQGKDRCLFKSSAMGQANAARDKLYDLRECDMSGKSAAGFDLSGVIASEANFSKGDFKEVVMSKAYARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTNADTRASAGC 196          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A836CB03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB03_9STRA)

HSP 1 Score: 175 bits (443), Expect = 9.080e-51
Identity = 144/208 (69.23%), Postives = 168/208 (80.77%), Query Frame = 0
Query:   53 LPSCLLMSTNGADHFGADTTRALANIVAGVAVLLAGSGAVLADGSTQKFSLPPIS-NAKDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            + S ++ +  GA  F    +R +A ++AG++ LL G+   LADGST KF+LPPI+ + KDRC FKSS+MGQANAAR+KL+DLR CD+SG SAA  DLSGVIASEA+FSK DFKE  +SKAYARNS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FTEA MG+FD ++LCKNPTLKG NPVT A T+ES GC
Sbjct:   29 ITSVMMKAEGGASPF----SRTVAAVLAGIS-LLGGAELALADGSTGKFALPPINYSEKDRCTFKSSSMGQANAAREKLFDLRMCDMSGKSAALSDLSGVIASEANFSKVDFKEAQLSKAYARNSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTEAAMGDFDLKSLCKNPTLKGENPVTGAPTKESAGC 231          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A448ZE67_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZE67_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.370e-44
Identity = 143/226 (63.27%), Postives = 164/226 (72.57%), Query Frame = 0
Query:   42 TATT---VNRASLRLPSCLLMSTNGADHFGADTTR----ALANIVAGVAVLLAGSGAVLADGSTQKFSLPPIS-NAKDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            TATT   V+R   R P+  L +T   D    + T     ALA+I + +++L AG     ADG T+KF LPP+    K RC  KSS++GQANAARDKLYDLRQC LSG SA GFDLSGVI +E D SK +F++ V SK Y R+SN+E  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TEA +G FD +NLCKNPTLKG NP T  DTR SVGC
Sbjct:   13 TATTEAFVSRNIERTPTLSLQATKNHDRESENATTFANVALASIFS-LSLLSAGPLPAFADGQTEKFKLPPVDLTDKTRCTLKSSSIGQANAARDKLYDLRQCKLSGESAVGFDLSGVIMTETDVSKVNFQDAVFSKGYLRDSNFEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAAIGNFDLKNLCKNPTLKGENPTTGEDTRFSVGC 237          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A7S4A906_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A906_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.610e-41
Identity = 138/226 (61.06%), Postives = 163/226 (72.12%), Query Frame = 0
Query:   42 TATT---VNRASLRLPSCLLMSTNGADHFGADTTR----ALANIVAGVAVLLAGSGAVLADGSTQKFSLPPISNA-KDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            TATT   V+R   R  +  L ST   D      T+    ALA+I + +++L AG     ADG T+KF LPP+  A K+RC   SS +GQANAARDKLYDLRQC+LSG +A GFDLSGVI +  D SK +F++ + SKAY R+SN+E   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  E+ +G FD +NLCKNP+LKG NPVT  DTR SVGC
Sbjct:   13 TATTEAFVSRNVERTSTLSLQSTKNHDRESDKVTKFANVALASIFS-LSLLSAGPLPAFADGQTEKFKLPPVDLADKNRCTLSSSTIGQANAARDKLYDLRQCNLSGKAAVGFDLSGVIMTGTDVSKVNFQDAIFSKAYLRDSNFEGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESALGNFDLKNLCKNPSLKGENPVTGEDTRLSVGC 237          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A4D9D0Q4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Q4_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.670e-41
Identity = 119/168 (70.83%), Postives = 134/168 (79.76%), Query Frame = 0
Query:   93 LADGSTQKFSLPPISNA-KDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            +ADG+T +F LPP+    K RC FKSS MGQANAARDKLYDLR CD+SG  A GFDLSG I +E  F K +FKE V+SKAYA+ ++   XXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX T+ YMGEF+ R LCKNPTLKGTNPVT+A T+ES GC
Sbjct:   78 IADGATSRFVLPPVDTKDKGRCQFKSSNMGQANAARDKLYDLRLCDMSGKDATGFDLSGAIMAEGTFKKVNFKEAVLSKAYAKAADXXXXXXXXXXXXRVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGC 245          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A7S0LGG3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGG3_9EUKA)

HSP 1 Score: 150 bits (378), Expect = 3.630e-41
Identity = 123/170 (72.35%), Postives = 137/170 (80.59%), Query Frame = 0
Query:   91 AVLADGSTQKFSLPPISNAK-DRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            A+ ADG    F  PPI  +K DRC F  SAMGQANAARDKLYDLR+C +SG SAA  D+SG + ++ DFSK DFKE  +SK YA  + ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAY+G+FDQR LCKNPTLKG NPVT A TRES GC
Sbjct:   50 AIAADGDIT-FKFPPIDRSKKDRCTFSGSAMGQANAARDKLYDLRECKMSGASAASLDISGALMAQGDFSKADFKEAQLSKVYAPGAVFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYVGQFDQRKLCKNPTLKGENPVTGAGTRESAGC 218          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A7S1H2G8_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2G8_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.610e-40
Identity = 124/178 (69.66%), Postives = 137/178 (76.97%), Query Frame = 0
Query:   83 AVLLAGSGAVLADGSTQKFSLPPIS-NAKDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            AV+L+      ADG T++F LPPI    K RC   SSA+GQANAARDKLYDLR+C LSG  A GFDLSGVI ++ D SK DFKE   SK Y R+SN++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AY+G+FD RNLCKNPTLKG N VT ADTR S GC
Sbjct:   20 AVILSSPMPSYADGQTKEFKLPPIDFKDKSRCTLSSSAIGQANAARDKLYDLRECKLSGEKATGFDLSGVIMTKTDVSKVDFKEAYFSKGYLRDSNFDGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYIGDFDIRNLCKNPTLKGENSVTGADTRLSAGC 197          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A7S2H4B8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H4B8_9EUKA)

HSP 1 Score: 147 bits (372), Expect = 3.210e-40
Identity = 112/168 (66.67%), Postives = 126/168 (75.00%), Query Frame = 0
Query:   93 LADGSTQKFSLPPISNA-KDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            LADG T++F  PPI    KDRC F SSAMGQANAARD LYDLR+C +S T+AAGFD+SG + +  DFSK DFKE  +SK YA  + ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         FTEAY+G FD R LCKNPTL G NP+T A TR S GC
Sbjct:   55 LADGDTKEFKFPPIDRKNKDRCKFSSSAMGQANAARDSLYDLRECAMSETNAAGFDISGALMANGDFSKVDFKEAQLSKVYAPGAKFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEADLKDADFTEAYIGMFDLRKLCKNPTLDGENPITGAPTRASAGC 222          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A7S3B0S2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B0S2_9EUKA)

HSP 1 Score: 145 bits (367), Expect = 2.060e-39
Identity = 120/168 (71.43%), Postives = 131/168 (77.98%), Query Frame = 0
Query:   93 LADGSTQKFSLPPISNA-KDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            LADG T KF  PPI N  K+RC F SSAMGQANAARD LYDLRQC ++GT A GFD+SG + +  DFS  +FKE  +SK YA       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FTEAY+G++DQR LCKNP LKG NP T A TRES GC
Sbjct:   61 LADGDTSKFKFPPIDNTNKNRCQFSSSAMGQANAARDSLYDLRQCSMAGTMAMGFDISGALLAGGDFSGVNFKEAQLSKVYAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTEAYIGDYDQRKLCKNPKLKGENPKTGAPTRESAGC 228          
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Match: A0A7S2UM92_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM92_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.520e-39
Identity = 127/193 (65.80%), Postives = 138/193 (71.50%), Query Frame = 0
Query:   68 GADTTRALANIVAGVAVLLAGSGAVLADGSTQKFSLPPIS-NAKDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSGVIASEADFSKGDFKEVVMSKAYARNSNWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYMGEFDQRNLCKNPTLKGTNPVTKADTRESVGC 259
            GA+T R   +       L     A LADG T+ F LPPI  N K RCV  SSAMGQANAARDKLYDLRQC+LSG  A+GFDLSGVI ++ + S    KE   SKAY        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FT+AY+GE+D RNLCKNPTLKG NPVT  DTR S  C
Sbjct:   52 GAETFRQAISGAVVALTLFTSPMASLADGQTKDFKLPPIDVNDKTRCVLNSSAMGQANAARDKLYDLRQCNLSGKDASGFDLSGVIMTDTNLSNAKLKEAQFSKAYLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADFTDAYIGEYDIRNLCKNPTLKGENPVTGVDTRFSANC 244          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ97_ECTSI1.200e-6482.80Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID... [more]
A0A836CB03_9STRA9.080e-5169.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A448ZE67_9STRA2.370e-4463.27Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4A906_9STRA1.610e-4161.06Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A4D9D0Q4_9STRA2.670e-4170.83Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0LGG3_9EUKA3.630e-4172.35Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S1H2G8_9STRA1.610e-4069.66Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2H4B8_9EUKA3.210e-4066.67Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S3B0S2_9EUKA2.060e-3971.43Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2UM92_9STRA2.520e-3965.80Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.100coord: 129..260
e-value: 7.7E-26
score: 91.9
NoneNo IPR availablePANTHERPTHR47485:SF1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 66..245
NoneNo IPR availablePANTHERPTHR47485FAMILY NOT NAMEDcoord: 66..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.689
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 132..234
NoneNo IPR availableTMHMMTMhelixcoord: 75..94
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 132..169
e-value: 1.2E-5
score: 24.8
IPR001646Pentapeptide repeatPFAMPF13599Pentapeptide_4coord: 174..225
e-value: 4.8E-7
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:1473052..1483029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18161.1mRNA_F-serratus_M_contig7.18161.1Fucus serratus malemRNAF-serratus_M_contig7 1472993..1483722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7.18161.1 ID=prot_F-serratus_M_contig7.18161.1|Name=mRNA_F-serratus_M_contig7.18161.1|organism=Fucus serratus male|type=polypeptide|length=261bp
MTVALGALFIASSVVGSAAFLAGGCVFRPSVHSSDRSSPPLTATTVNRAS
LRLPSCLLMSTNGADHFGADTTRALANIVAGVAVLLAGSGAVLADGSTQK
FSLPPISNAKDRCVFKSSAMGQANAARDKLYDLRQCDLSGTSAAGFDLSG
VIASEADFSKGDFKEVVMSKAYARNSNWENVDFTNAVVDRVSFDGSSMKG
AIFQNAVITSTSFTDADVENADFTEAYMGEFDQRNLCKNPTLKGTNPVTK
ADTRESVGCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat