prot_F-serratus_M_contig7.18138.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7.18138.1
Unique Nameprot_F-serratus_M_contig7.18138.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length374
Homology
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 4.230e-133
Identity = 230/317 (72.56%), Postives = 269/317 (84.86%), Query Frame = 0
Query:   59 AKGTKLFVGGKIFGQEEEPAPLPERA----KPVGDSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDWSESDWRARAEEQKRLAQEIARKFPDVGQVKVDRMGNIIGGVNPFEGTDVKLEDRPNPDEEE-DFPELAGESSGMDDPADSPWRLEAERIIREQVERCGLTCYDILWTFHRLEVTVTRGPGDGPIEDSAYVDSEKLMEAIKRVNNALEEKEDELFVLGRHELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFKNKRELHGKLLERTFDELFINQSGRTVRIPLALVDEVRLPPALVESGD 370
            A  T+L+VGGKIFG E+EP P P+      KP   S     XXXXXXXXXXXXXXXXXXXXXXXXX      YD+S+ D  AR +++KRLA+E+ARKFPD+G+VKVD+ GNI+GGVNPFEGTDVKLED+P PD++E DFPE+AG  +GMDDPAD+PWRLEAE+I+R+QV+ CGLTCYDILWTFHRLEVTVTR  GDGPIE++AYVDS+KLM+AIK VN ALE +E+ELFVLGRHEL+VATPG KDVLTT K+FKA+KGF++IVK GGPFK KREL GKLLERTFDEL I ++GR VRIPLALVDEVRLPPALVE+GD
Sbjct:   50 ATATRLYVGGKIFG-EDEPTPPPQGQPGLIKPAVKSNRKEEXXXXXXXXXXXXXXXXXXXXXXXXXK-----YDFSD-DLAAREQDEKRLAEELARKFPDIGRVKVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEKDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 359          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.350e-84
Identity = 135/234 (57.69%), Postives = 178/234 (76.07%), Query Frame = 0
Query:  140 EQKRLAQEIARKFPDVGQVKVDRMGNIIGGVNPFEGTDVKLEDRPNPD---EEEDFPELAGESSGMDDPADSPWRLEAERIIREQVERCGLTCYDILWTFHRLEVTVTRGPGDGPIEDSAYVDSEKLMEAIKRVNNALEEKEDELFVLGRHELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFKNKRELHGKLLERTFDELFINQSGRTVRIPLALVDEVRLPPALVESGD 370
            E++ +A E+ +++PD   V VD MGN+IGGV+P+   +  LE R  P+   + +++PE+AG++ GMDDP D+PWR EAE IIR +VE  GL CYDI+W+FH+LEVTVTRG      E++ YVDS+ LM+AI+ VN ALE++E+ L+VLGRHELI+ATPG KD+LTT +EFKAFKGFD++V TG     +RE+ GKL ERTFDEL + Q GR VRIPLALVDEVRLP A +E G+
Sbjct:  137 EEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLE-RGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGE 369          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.010e-34
Identity = 77/192 (40.10%), Postives = 107/192 (55.73%), Query Frame = 0
Query:  192 FPELAGESSGMDDPADSPWRLEAERIIREQVERCGLTCYDILWTFHRLEVTVTRGPGDGPIE-------DSAYVDSEKLMEAIKRVNNALEEKEDELFVLGRHELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFKNKRELH---GKLLERTFDELFINQSGRTVRIPLALVDEVRLPPALVESGDLGI 373
             PE  GE  GMDDP D+PWRL+AE +IR  V   G   YD+ W  H + V +TR  G G +E       D+  + S++++E  + V  AL   ++ L VL R  L V TPG KDVLTT +EF+AF+G+++ V    P       +   G+LLER      +N  G+ V IP  +V EVRLP A+ E+ D  +
Sbjct:  117 IPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDG-GNVESEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADDFEV 307          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 138 bits (347), Expect = 6.140e-33
Identity = 75/192 (39.06%), Postives = 106/192 (55.21%), Query Frame = 0
Query:  192 FPELAGESSGMDDPADSPWRLEAERIIREQVERCGLTCYDILWTFHRLEVTVTR-------GPGDGPIEDSAYVDSEKLMEAIKRVNNALEEKEDELFVLGRHELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFKNKRELH---GKLLERTFDELFINQSGRTVRIPLALVDEVRLPPALVESGDLGI 373
             PE  GE  GMDDP D+PWRL AE +IR  V   G   YD+ W  H + V +TR         G+G + D+  + S++++E  + V  AL   ++ L +L R  L V TPG KDVLTT +EF+AF+G+++ V    P       +   G+LLER      +N  G+ V IP  +V EVRLP A+ E+ D  +
Sbjct:  227 IPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEG-VADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADDFEV 417          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.280e-28
Identity = 74/171 (43.27%), Postives = 106/171 (61.99%), Query Frame = 0
Query:  197 GESSGMDDPADSPWRLEAERIIREQVER-CGLTCYDILWTFHRLEVTVTRGPGDGPIEDSAYVDSEKLMEAIKRVNNALEEKEDELFVLGRHELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFK-NKRE-LHGKLLERTFDELFINQSGRTVRIPLALVDEVRLPPA 364
            G  +G+DDP D  WRL+AE ++R  V    G+  YD+ W    L+V + +   +G   D   V++     A + + +ALE  ++EL +L RHEL V++ G K++L + +EF+AFKGFD++VKT  P   +KRE L+GKL+ R   E  IN  GR VRIP  LV+EVRLP A
Sbjct:  124 GIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 289          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 115 bits (288), Expect = 5.410e-26
Identity = 74/187 (39.57%), Postives = 106/187 (56.68%), Query Frame = 0
Query:  197 GESSGMDDPADSPWRLEAERIIREQVERC--GLTCYDILWTFHRLEVTVTRGPGDGPIEDSAYVDSEKLMEAIKR-VNNALEEKEDEL---FVLGRHELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFKNK-------RELHGKLLERTFDELFINQSGRTVRIPLALVDEVRLPPALVESGD 370
            G + GMDDP D+PWRLEA   I E V+         D+LW F  +++TVT      P ED+    S  ++E + R +++ L   E EL     L  H L V TPG  +V+TT ++F+A+KGF + V T G  K+        + L G L  RT +E+ +NQ GR V++P+A+V EVRLP   +E+GD
Sbjct:   96 GPALGMDDPLDAPWRLEAAAEIEELVKEKYPDAQAVDVLWAFSNVQITVT------PKEDANVPLSSAVIEMLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGD 276          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.420e-22
Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = 0
Query:  215 ERIIREQVER-CGLTCYDILWTFHRLEVTVTRGPGDGPIEDSAYVDSEKLMEAIKRVNNALEEKEDELFVLGRHELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFK-NKRE-LHGKLLERTFDELFINQSGRTVRIPLALVDEVRLPPA 364
            + ++R  V    G+  YD+ W    L+V + +   +G   D   V++     A + + +ALE  ++EL +L RHEL V++ G K++L + +EF+AFKGFD++VKT  P   +KRE L+GKL+ R   E  IN  GR VRIP  LV+EVRLP A
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 159          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: A0A846DL69_9CYAN (Ribosome maturation factor RimP n=1 Tax=Moorena sp. SIO2B7 TaxID=2607823 RepID=A0A846DL69_9CYAN)

HSP 1 Score: 82.0 bits (201), Expect = 3.980e-15
Identity = 42/95 (44.21%), Postives = 65/95 (68.42%), Query Frame = 0
Query:  268 KRVNNALEEKEDELFVLGR-HELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFKNKRELHGKLLERTFDELFINQSGRTVRIPLALVDEVRL 361
            +R++ ALEEK D   ++G  + L +++PG   VLTT +EF AFKGF +IVKT  P++N++E  G+L  R  + +++NQ GR + IP  LV +V+L
Sbjct:   55 ERMSLALEEKLDAAEIIGNSYVLEISSPGISRVLTTDREFMAFKGFSVIVKTFAPYQNQKEWRGRLQGRDEETVYLNQKGRAIAIPRQLVAKVQL 149          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: RIMP_GLOVI (Ribosome maturation factor RimP n=2 Tax=Gloeobacter TaxID=33071 RepID=RIMP_GLOVI)

HSP 1 Score: 80.9 bits (198), Expect = 1.170e-14
Identity = 53/155 (34.19%), Postives = 86/155 (55.48%), Query Frame = 0
Query:  212 LEAERIIREQV-ERCGLTCYDILWTFHRLEVTVTRGPGDGPIEDSAYVDSEKLMEAIKRVNNALEEKEDELFVLGRHELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFKNKRELHGKLLERTFDELFINQSGRTVRIPLALVDEVRLPPAL 365
            +E    + E V E+ GL    + +  H    T+ R     P E +   D EK+  A++    AL +  D+L ++G + L V++PG + VLTT +EF AF+GF ++VKT GP   K++  G+LLER  + +++  +GR V +P   V  V+L  +L
Sbjct:    7 VEQVTALAEPVAEQLGLQLVAVAYQTHTKPATL-RVDIRHPTEGTGLDDCEKMSRALE----ALLDTRDDL-IIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGPVDGKKQWEGRLLERDGENVYLTIAGRRVALPRPQVARVQLVQSL 155          
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Match: UPI001A00E139 (Ribosome maturation factor RimP n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI001A00E139)

HSP 1 Score: 79.3 bits (194), Expect = 4.010e-14
Identity = 41/99 (41.41%), Postives = 65/99 (65.66%), Query Frame = 0
Query:  264 MEAIKRVNNALEEKEDELFVLGR-HELIVATPGTKDVLTTSKEFKAFKGFDIIVKTGGPFKNKRELHGKLLERTFDELFINQSGRTVRIPLALVDEVRL 361
            ++  +R++ ALE K D   +L   + L +++PG   VLTT ++F AFKGF +IVKT  P+K ++E  GKLL R  + ++INQ G+ + IP  L+ +V+L
Sbjct:   52 LDDCERMSRALEAKLDATEILSSSYVLEISSPGISRVLTTDRDFLAFKGFAVIVKTFAPYKEQKEWQGKLLSRDGEAVYINQKGKAIAIPRNLIAKVQL 150          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI4.230e-13372.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA1.350e-8457.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA2.010e-3440.10Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA6.140e-3339.06Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA1.280e-2843.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TZY1_9STRA5.410e-2639.57Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SV25_9STRA3.420e-2241.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A846DL69_9CYAN3.980e-1544.21Ribosome maturation factor RimP n=1 Tax=Moorena sp... [more]
RIMP_GLOVI1.170e-1434.19Ribosome maturation factor RimP n=2 Tax=Gloeobacte... [more]
UPI001A00E1394.010e-1441.41Ribosome maturation factor RimP n=1 Tax=Pleurocaps... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 257..280
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..373
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.561
IPR036847Ribosome maturation factor RimP, C-terminal domain superfamilySUPERFAMILY74942YhbC-like, C-terminal domaincoord: 300..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:1027021..1063002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18138.1mRNA_F-serratus_M_contig7.18138.1Fucus serratus malemRNAF-serratus_M_contig7 1026956..1063488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7.18138.1 ID=prot_F-serratus_M_contig7.18138.1|Name=mRNA_F-serratus_M_contig7.18138.1|organism=Fucus serratus male|type=polypeptide|length=374bp
MIYSCTVFIMLSTHVRSFLLPAMPPHAAADHTIRQVPLREAHRSWTIEAN
SFSERLLIAKGTKLFVGGKIFGQEEEPAPLPERAKPVGDSGEGEGEGEEA
EEDGEGEDHSGDGAEPKPKRRKRRKKYDWSESDWRARAEEQKRLAQEIAR
KFPDVGQVKVDRMGNIIGGVNPFEGTDVKLEDRPNPDEEEDFPELAGESS
GMDDPADSPWRLEAERIIREQVERCGLTCYDILWTFHRLEVTVTRGPGDG
PIEDSAYVDSEKLMEAIKRVNNALEEKEDELFVLGRHELIVATPGTKDVL
TTSKEFKAFKGFDIIVKTGGPFKNKRELHGKLLERTFDELFINQSGRTVR
IPLALVDEVRLPPALVESGDLGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036847RimP_C_sf