prot_F-serratus_M_contig7.18136.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7.18136.1
Unique Nameprot_F-serratus_M_contig7.18136.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length654
Homology
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 896 bits (2316), Expect = 0.000e+0
Identity = 479/647 (74.03%), Postives = 531/647 (82.07%), Query Frame = 0
Query:    1 MNFSKIGIQGYSLGSLHLNSEEFVWTSADKSSSKKVKWADASHATWAQFGDYCHLRLFMKNDLPPVRLDGFSKSQYSEVEKFLAEQDLELSKDRINCGGGNYGKIDVLGDIVRFSAENRTLFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDDDIDEPSPAENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQDXXXXXXXXXADYAPGAQGGSDVESSSXXXXXXXXXXIVP-----------------QKKSKKRSGTSSGITSRVKKQPLKASVSGSSKAGPGPRKRAKKDKNAPKGASSAYMQFSQAKRAEVKEENPDMKPTEISKVLGERWGKMDAAAKAPYNERAQADKERYRREKDAYDSKMA 630
            MNFSKIG+QGYSLG+L L +EE  WTS DKSSSKKVKW D SHATWAQ+  YCHLRLFMK D  PVRLDGFSK+Q++++EKFL+E+D+ LS +  N GGGNYG I+VL +IVRFS+ N+TLFDLN+KD+SQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKD+D DE SPAE+LQM+VMERANIHDVKGKVLVEFNE+QGTFDFPRGRYS+EMYSHFMRMHG+RYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEATI VNMS+EDLQ KY+ NLNSEM GPLHNL+AKIFKVL++K VYVTGKFSS NGAK+VKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET KPYVFSGIDR+EY+SLYSFLSTKKLRIKNIK+SGND +MLQLG+LDDHDPYKAALD+DQ                   G D ES  XXXXXXXXXX                     K SKKR GT S      +K                    AKKDK+APKGA SA+MQFSQA RA+VK +NP++K TEISKVLGE+WGK+D   K PY ++A  DK RY+RE+DAYDSK A
Sbjct:    1 MNFSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADIEKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQ-------------------GEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXX---AKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKA 625          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 597 bits (1539), Expect = 4.540e-207
Identity = 346/500 (69.20%), Postives = 376/500 (75.20%), Query Frame = 0
Query:  119 RTLFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDDDIDEPSPAENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAK----IFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQDXXXXXXXXXADYAPGAQGGSDVESSSXXXXXXXXXXIVP------------------------QKKSKKRSGTSSGITSRVKKQ--------------PLKASVSGSSKAGPGPRKRAKKDKNAPKGASSAYMQFSQAKRAEV 576
            RTLFDLN+KD+SQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKD+D DE SPAE+LQM+VMERANIHDVKGKVLVEFNE+QGTFDFPRGRYS+EMYSHFMRMHG+RYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMS+EDLQ KY+ NLNSEM GPLHNLVAK    IFKVL+ K VYVTGKFSS NGAK+VKCALGANEG+LYPLNK                             GAGVTRNFDLCVAPKSVAGET KPYVFSGIDR+EY+SLYSFLSTKKLRIKNIK+ GND +MLQLG+LDDHDPYKAALD+D+          ADYAP A+GGSD     XXXXXXXXXX                            K SKK+ GT S      +K+              P +AS   SSK  P P+KR KKDK+APKGA SA+MQFSQA RA+ 
Sbjct:    3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDE-GEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSK--PTPKKRTKKDKDAPKGAMSAFMQFSQANRAQA 470          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 442 bits (1137), Expect = 2.750e-144
Identity = 292/652 (44.79%), Postives = 370/652 (56.75%), Query Frame = 0
Query:    3 FSKIGIQGYSLGSLHLNSEEFVWTSADKSSSKKVKWADASHATWAQFGDYCHLRLFMKNDL-PPVRLDGFSKSQYSEVEKFLAEQDLELSKDRINCGGGNYGKIDVLGDIVRFSAENRTLFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDDD-----IDEPSPA------------ENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDP--------YKAALDEDQDXXXXXXXXXADYAPGAQGGSDVESSSXXXXXXXXXXIVPQKKSKKRSGTSSGITSRVKKQPLKASVSGSSKAGPGPRKRAKKDKNAPKGASSAYMQFSQAKRAEVKEENPDMKPTEISKVLGERWGKMDAAAKAPYNERAQADKERYRREKDAYDS 627
            F  IGIQG+S+GS+  + E  +W S+D+SS +KV W+ A  ATWA FG Y HLR+FMK+   PPVR DGF ++ +  +++ LA   ++LS+D+                                                               D LV +R+ LP++ +D     +DE   A            E    +VM+RANI DVKG VL E + + GTF  PRGRY++EMYS F+RMHG++YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E T+ +NMS  +LQ KY G L   M G L NL+AKIFK L+ +AV+VTG + S  GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE+ESVEFQRY G Q    V R+FDLCV  +S++GE +K Y FSGIDR+EY SLY +  TK LRIKNIK SG+  +      +D  D          K++  E    XXXXXXXX                 XXXXXXXXXX                       +P        +           KD NAPKGA SA+M FS   R +V ++ P +K TE+SKVLGERW  M A  K  + ++A ADK RY  E   Y S
Sbjct:    9 FKGIGIQGHSVGSVKFSDEGVMWASSDRSSQQKVLWSKAEKATWAVFGKYAHLRMFMKDPADPPVRFDGFQRADFDRLKEALAAHSIKLSRDK---------------------------------------------------------------DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVREEGEIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKARYGTEMQEYKS 597          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 2.310e-126
Identity = 256/666 (38.44%), Postives = 366/666 (54.95%), Query Frame = 0
Query:    6 IGIQGYSLGSLHLNSEEFVWTSA--------DKSSSKKVKWADASHATWAQFGDYCHLRLFMKNDLP---PVRLDGFSKSQYSEVEKFLAEQ-DLELSKDRINCGGGNYGKIDVLGDIVRFSA----------------ENRTLFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDD----DIDEPSPAENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPY-----KAALDEDQDXXXXXXXXXADYAPGAQGGSDVESSSXXXXXXXXXXIVPQKKSKKRSGTSSGITSRVKKQPLKASVSGSSKAGP-------------GPRKRAKKDKNAPKGASSAYMQFSQAKRAEVKEENPDMKPTEISKVLGERWGKMDAAAKAPYNERAQADKERYRRE 621
            IG+ G+S+G+   + +   W SA        D SSS+ +       A W  FG   H+R+  K   P    +R DGF  + +  +   L    D++L+K  ++  G ++G  D+    + F                  +   +   N+K+ISQCV+PG  + N++E+Q HESDA +   D LVAIR  +P   D    ++D  +PAE  Q  +M+ ANI    G V+VE  E +GTF  PRGRY+IE+Y  F+RM G +YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+  E L+ +YNG+L   M G L NLVAK FK++A K V++ GKF++ N    VKCAL A+EGHLYPL K FIFIHKPT ++ FD++ESVEFQRY G QG+  TRNFDLCV+  +    +TK Y+FSGIDR++YT LY+FLS KK++IKN++ +  D +       ++   Y        ++E  +               +  G D +  S              KKSK         +++           GSS                  P+K+   D  APK   SAY  F  A R ++KE+NPD    E+S + G+ W K+    K  Y + A++D  R++RE
Sbjct:   10 IGLHGHSVGTFTADPDGLRWKSAVMGGGDNDDISSSRVLPAKTLVAAKWTVFGRSGHVRVRSKASDPVNAELRFDGFPAADFDRLRDVLKRLFDVDLTKHAMSSAGTSFGLTDIEDGNMVFRQCILEDADEEGEEFEPRDGDEMMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAARFKRE 672          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 383 bits (984), Expect = 5.180e-122
Identity = 211/469 (44.99%), Postives = 295/469 (62.90%), Query Frame = 0
Query:    6 IGIQGYSLGSLHLNSEEFVWTSA------DKSSSKKVKWADASHATWAQFGDYCHLRLFMKNDLPPVRLDGFSKSQYSEVEKFLAEQ-DLELSKDRINCGGGNYGKIDVLGDIVRFSA----------------ENRTLFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDD----DIDEPSPAENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGND 447
            IG+ G+S+G+   +++   W SA      D  +S+ +       A W  FG   HLR+   N     R DGF  S + +V   + E  D+E +K  ++  G ++G  ++    + F                  E   +  + + ++SQCV+PG  + N++ELQ HESD  +   D LVAIR  +P   +    D D P+ AE     +M+ A I +  G V+VEF+EN+GTF  PRGRY IE+Y  F+RM G +YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + + VN+  ++L+ +Y G L   M G L NL+AK FK++A K V++ GKF +      VKCAL ANEGHLYPL KSF+FIHKP  +I FDE++SVEFQRY G QG+  TRNFDLCV   S AG+  K Y+FSGIDR++YTSLY+FLS KK++IKNI++S  D
Sbjct:   15 IGLHGHSVGTFMADAQGIKWKSALLTDDDDVVTSRSISKKHVIGARWTIFGRSGHLRIQTPNT--EFRFDGFPYSDFDKVRDIMNEYYDVETNKLPMSTAGNSFGLTEIEDRNLAFKQCILEDADEEGEEFEPREGDEMMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKID 478          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA)

HSP 1 Score: 379 bits (972), Expect = 1.000e-118
Identity = 267/612 (43.63%), Postives = 364/612 (59.48%), Query Frame = 0
Query:   34 KKVKWADASHATWAQFGDYCHLRLFM-----KNDLPPVRLDGFSKSQYSEVEKFLAEQ-DLELSKDRINCGGGNYGKIDVLGDIVRFSA---ENRT---LFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDDDIDEPSP------AENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETT--KPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQDXXXXXXXXXADYAPGAQGGSDVESSSXXXXXXXXXXIVPQKKSKKRSGTSSGITSRVKKQPLKASVSGSSKAGPGPRKRAKKDKNAPKGASSAYMQFSQAKRAEVKEENPDMKPTEISKVLGERWGKMDAAAKAPYNERAQADKERYRREKDAY 625
            K +   +   A W  FG   HLR+ +     KN    +R DGF  + + +++ F  E  D+E+SK  I+  G  YG+  + G  + F     E RT   +  L++ ++SQCV+PG  + N+VELQ  ESDA +   D LV++R+ +P  D ++D PS       AE LQ  +M+ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   + VN+  + L+ +Y  +L   M G L NLVAK FKV+A K V++ GKFS+ N    VKCAL ANEG LYPL K FIFIHKP  +I F+E+ESVEFQRY G QG+  TRNFDLCV  K+ A   +  + YVFSGIDR++YT LY+FLSTK +RIKN+++    G++ Q+  + + D       +D +XXXXXXXXX                 XXXXXXXXXX                   +V   P   ++S         +K+AKKD N PK A SAYM +S   R  VK+ENP  K  +++K++   + K+     A   +R   +KERY RE   Y
Sbjct:    1 KNIPKGNIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYDIEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDEMMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIP-PDPEVD-PSDKTAKTSAELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQEIS--GAVEQVAPVYNEDEIYGGPADDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXKVADIPS-PTIS---------KKKAKKDPNKPKQALSAYMVYSNLNRERVKKENPSAKFGDMAKLIAADYKKLSGDELADVEKRVIKEKERYAREMKDY 590          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC)

HSP 1 Score: 382 bits (981), Expect = 1.380e-118
Identity = 251/664 (37.80%), Postives = 360/664 (54.22%), Query Frame = 0
Query:    2 NFSKIGIQGYSLGSLHLNSEEFVWTSA----DKSSSKKVKWADA-SHATWAQFGDYCHLRLFMK-------NDLPP-VRLDGFSKSQYSEVEKFLAEQ-DLELSKDRINCGGGNYGKIDVLGDIVRFSAENRT----------------LFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDD----DIDEPSPAENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET--TKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDH---DPYKAALDEDQDXXXXXXXXXADYAPGAQGGSDVESSSXXXXXXXXXXIVPQKKSKKRSGTSSGITSRVKKQPLKASVSGSSKAGPGPRKRAKKDKNAPKGASSAYMQFSQAKRAEVKEENPDMKPTEISKVLGERWGKMDAAAKAPYNERAQADKERYRREKDAYD 626
            ++  IG+ G+++G+        +W S+    D   +K+V   ++ S A W  FG   HLR+  K         LP  +R DGF  + Y  + + L +   + L +  ++  G ++G  D+    + F   N                  +  L++ ++SQCV+PG  + N++E+Q  ESD  +   D LVA+R  +P   D    D D P+ AE LQ  +M+ A++    G ++ EF+E +GTF  PRGRYSIE+Y  F+R+ G +YDYKI+Y+DIS+LFLL + D+  VAFV++LDKPIRQGQQ+Y  LV++ TK+ + + +N+    L+ +Y G +   M G   NLVAK FKV+  K V++ GKF+++N    VKCAL ANEGHLYPL K FIFIHKP  +I FDEIESVEFQRY G QG+  TRNFDLCV+  S  G++  TK Y FSGID++ Y +LYSFLS KK++IKN++  G +         D+    D      D D++       XX        G    + S        XXX                                     P       +D NAPK   SAY+ F+ AKR+E+KE NPD    +ISK+LG+ + ++  A K PY+E A+ DK RY+RE + YD
Sbjct:    7 SWKHIGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEALRDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKKPGAPRYDERMSDDEESDDSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARYKREMEDYD 667          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 376 bits (965), Expect = 1.330e-116
Identity = 274/686 (39.94%), Postives = 374/686 (54.52%), Query Frame = 0
Query:    6 IGIQGYSLGSLHLNSEEFVWTSA-------DKSSSKKVKWADASHATWAQFGDYCHLRLFMK------NDLPPVRLDGFSKSQYSEVEK-FLAEQDLELSKDRINCGGGNYGKIDVLGDIVRFSA-------------ENRT---LFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDDDIDEP-----SPAENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETT--KPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQ-SGNDGSMLQLGNLD------DHDPYKAALDEDQDXXXXXXXXXADYAPG----------------------AQGGSDVESSSXXXXXXXXXXIVPQKKSKKRSGTSSGITSRVKKQPLKASVSGSSKAGPGPRKRAKKDKNAPKGASSAYMQFSQAKRAEVKEENPDMKPTEISKVLGERWGKMDAAAKAPYNERAQADKERYRREKDAY 625
            IG+ G+S+G+         W SA          +++ +  +    A W  FG   HLRL +       N    +R DGF  + +  ++  F     +E+SK  I+  G  YG+  +LG  + F               E RT   +  L++ ++SQCV+PG  + N+VELQ  ESDA +   D LV+IR  +P  D ++D       S AE LQ  +M+ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   I VN+  + L+ +Y  +L   M G L NLVAK FKV+A K V++ GKFS+ N    VKCAL ANEG LYPL K F+FIHKP  +I F+E+ESVEFQRY G QG+  TRNFDLCV+ K+ A   +  + YVFSG+DR++YT LY+FLSTK +RIKN+++ +G       + + D      DH+  + + DE  D    XXXXX                            A+GG       XXXXXXXXXX              +G                           AKKD N PK A SA+M FS A RA VKEENPD K  E++K+L   +  +     A  +++ + +K+RY RE + Y
Sbjct:   10 IGLHGHSVGTFACGEAGVQWKSALYGRDDTGSGTTRNIPKSLIERAAWTVFGKSGHLRLKVAQQEGKANLHHEMRFDGFPVAAFDNLKDVFQDTYGIEVSKHNISSAGTQYGQSKILGKKLVFQHCILEDADEEGEEFEVRTGDEMMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIP-PDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQEIAGVQEKAAPVYDEDEIYGGPDHEMLEESEDESYDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLEEARGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSXXXXXX--------------------AKKDPNKPKRAQSAFMIFSNANRARVKEENPDAKFGEMAKLLSAEYKNLSKDELAELDKKVEKEKKRYEREMENY 671          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 379 bits (973), Expect = 2.410e-116
Identity = 213/477 (44.65%), Postives = 300/477 (62.89%), Query Frame = 0
Query:    6 IGIQGYSLGSLHLNSEEFVWTSA--------DKSSSKKVKWADASHATWAQFGDYCHLRLFMKND-------LPPVRLDGFSKSQYSEVEK-FLAEQDLELSKDRINCGGGNYGKID-----------VLGDIVRFSAE-----NRTLFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDD----DIDEPSPAENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET-TKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSG 445
            IG+ G+S+G+   +     W SA        D  +S+ +     + A W  FG   H+R+  K            +R DGF  + Y +V K F    ++++++  ++  G ++G  D           +L D      E        +  L + ++SQCV+PG  + N++ELQ HESD  +   D LV +R+ +P   D    D D  +PAE LQ  +M+ ANI +  G V+VEF+E++GTF  PRGRY+IE+Y  F+RM G +YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ + VN+  E LQ++Y G+L   M G L NLVAK FKV+A K V++ GKF++ N    VKCAL ANEGHLYPL K F+FIHKP  ++ FDE+ESVEFQRY G QG+  TRNFDLCV   + +G+T +K YVFSGIDR++YT LY+FLS KK++I N +  G
Sbjct:   14 IGLHGHSVGTFTADPAAIQWKSAMMGASDDDDIVTSRLIPPRSVASAQWTVFGRSGHIRIQQKPGGGSQSAVALELRFDGFPPTDYDKVRKSFQRLYNVDVTRHSMSSCGASFGNTDLDNRNLVFRQCILEDNDEEGMEVEPQNGDEMMSLQLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVG 487          
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Match: A0A448Z7B6_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7B6_9STRA)

HSP 1 Score: 373 bits (957), Expect = 2.060e-115
Identity = 261/691 (37.77%), Postives = 371/691 (53.69%), Query Frame = 0
Query:    6 IGIQGYSLGSLHLNSEEFVW---------TSADKSSSKKVKWADASHATWAQFGDYCHLRLFMK------NDLPPVRLDGFSKSQYSEVEK-FLAEQDLELSKDRINCGGGNYGKIDVLGDIVRFS----------------AENRTLFDLNVKDISQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDDDIDEP-----SPAENLQMSVMERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNKYNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVA--PKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQDXXXXXXXXXADYAPG--------------------------------AQGGSDVESSSXXXXXXXXXXIVPQKKSKKRSGTSSGITSRVKKQPLKASVSGSSKAGPGPRKRAKKDKNAPKGASSAYMQFSQAKRAEVKEENPDMKPTEISKVLGERWGKMDAAAKAPYNERAQADKERYRREKDAY 625
            IG+ G+S+G+         W         T    +S++ V       A W+ FG   HLRL M+      N    +R DGF  S Y  ++  F A   +EL K  ++  G  YG+  + G  + F                  +   +  L++ ++SQCV+PG  + N+VELQ  ESDA +   D LV++R  +P  D ++D       S AE LQ  +M+ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   + VN+  + L+ +Y  +L   M G L NLVAK FK++A K V++ GKFS+ N    VKCAL ANEG LYPL K F+FIHKP  +I F+E+ESVEFQRY G QG+  TRNFDLCV+  P + +    + YVFSG+DR++Y  LY+FLSTKK+RIKN+++ G  G   Q   + + D      D + + XXXXXXXX                                      A+GGS  +S     XXX     +P     K+          V+ +P+               K+ KKD N PK  ++A+M FS   R   + ENPD+   +++K++G+++ ++     A   ++ + DK RY RE   Y
Sbjct:   14 IGLHGHSVGTFACTDAGIQWKSSLYGREDTGGLSASTRNVPKDSIEKAGWSVFGKSGHLRLNMEPKEGSSNTQHEMRFDGFPVSAYETMKDIFQASYGIELLKLNMSSAGTQYGRSKISGKKLVFRHCVLEDADEEGEEFEVRDGDEMMSLDLTEVSQCVLPGNNR-NEVELQFPESDAVEANNDQLVSVRFFIP-PDPEVDPSDKTIKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKIIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKPNAPSAGNQQEYVFSGVDRSDYAGLYNFLSTKKIRIKNLQEIG--GVQEQAVPVYNEDEIYGGPDHEMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEARGGSGSKSKRKSNXXXLIEDDLPXXXXGKKKV--------VETKPVS--------------KKLKKDPNKPKQVTTAFMIFSNTNRERFRTENPDLNFGDLAKLIGKKYKELSKEELAELEKKVEKDKLRYEREMKNY 676          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI0.000e+074.03FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE4.540e-20769.20FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A836C825_9STRA2.750e-14444.79FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7S4HR37_9STRA2.310e-12638.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2SJ65_9STRA5.180e-12244.99FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A1E7FQX7_9STRA1.000e-11843.63FACT complex subunit SSRP1 (Fragment) n=1 Tax=Frag... [more]
K0SUI2_THAOC1.380e-11837.80Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S0TAB4_9STRA1.330e-11639.94FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]
A0A6U3RIK7_9STRA2.410e-11644.65Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448Z7B6_9STRA2.060e-11537.77FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 608..628
NoneNo IPR availableGENE3D2.30.29.150coord: 191..331
e-value: 2.5E-48
score: 165.3
NoneNo IPR availablePANTHERPTHR45849FAMILY NOT NAMEDcoord: 7..616
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 7..616
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 211..440
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 258..274
score: 61.76
coord: 349..367
score: 55.26
coord: 367..384
score: 52.78
coord: 213..229
score: 45.59
coord: 235..251
score: 52.21
coord: 322..335
score: 33.04
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 557..627
e-value: 3.8E-24
score: 96.2
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 558..625
e-value: 7.3E-21
score: 74.4
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 558..626
score: 18.588
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 341..441
e-value: 1.2E-32
score: 124.5
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 343..440
e-value: 1.0E-22
score: 80.3
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 542..641
e-value: 2.3E-26
score: 93.9
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 549..629
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 332..439
e-value: 8.3E-33
score: 114.5
IPR024954SSRP1 domainPFAMPF03531SSrecogcoord: 99..169
e-value: 2.5E-16
score: 59.3
IPR038167SSRP1 domain superfamilyGENE3D2.30.29.220coord: 88..175
e-value: 5.3E-6
score: 28.1
IPR035417FACT complex subunit POB3-like, N-terminal PH domainPFAMPF17292POB3_Ncoord: 5..86
e-value: 7.9E-12
score: 45.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:770466..786116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18136.1mRNA_F-serratus_M_contig7.18136.1Fucus serratus malemRNAF-serratus_M_contig7 769879..786165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7.18136.1 ID=prot_F-serratus_M_contig7.18136.1|Name=mRNA_F-serratus_M_contig7.18136.1|organism=Fucus serratus male|type=polypeptide|length=654bp
MNFSKIGIQGYSLGSLHLNSEEFVWTSADKSSSKKVKWADASHATWAQFG
DYCHLRLFMKNDLPPVRLDGFSKSQYSEVEKFLAEQDLELSKDRINCGGG
NYGKIDVLGDIVRFSAENRTLFDLNVKDISQCVMPGVKKSNDVELQLHES
DATDQTEDTLVAIRVTLPEKDDDIDEPSPAENLQMSVMERANIHDVKGKV
LVEFNENQGTFDFPRGRYSIEMYSHFMRMHGTRYDYKIQYNDISKLFLLE
KPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQNK
YNGNLNSEMTGPLHNLVAKIFKVLADKAVYVTGKFSSNNGAKSVKCALGA
NEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLC
VAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSM
LQLGNLDDHDPYKAALDEDQDEDDEESEDDADYAPGAQGGSDVESSSESE
GGDDDSDIVPQKKSKKRSGTSSGITSRVKKQPLKASVSGSSKAGPGPRKR
AKKDKNAPKGASSAYMQFSQAKRAEVKEENPDMKPTEISKVLGERWGKMD
AAAKAPYNERAQADKERYRREKDAYDSKMATGTTAEGSPSRASAGSDDSA
EDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR009071HMG_box_dom
IPR013719DUF1747
IPR036910HMG_box_dom_sf
IPR011993PH-like_dom_sf
IPR024954SSRP1_dom
IPR038167SSRP1_sf
IPR035417POB3_N