prot_F-serratus_M_contig6975.18079.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6975.18079.1
Unique Nameprot_F-serratus_M_contig6975.18079.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length193
Homology
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BLAST of mRNA_F-serratus_M_contig6975.18079.1 vs. uniprot
Match: A0A6H5LP07_9PHAE (SMP-LTD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LP07_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.870e-11
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0 
Query:  111 RSYLKREGTSLLKATTTLASRTTHGVCRAVNVTGTAASVVTGGVFKLAGAAVLDVVDGMEYAS 173
            RS L+REG SLL++  T+ +RTT+G+ RAVNVTGTAASVV GG FKLAGAAVLD VD   + +
Sbjct:  142 RSRLRREGDSLLRSLKTVTTRTTNGLARAVNVTGTAASVVAGGAFKLAGAAVLDAVDTWRFVA 204
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BLAST of mRNA_F-serratus_M_contig6975.18079.1 vs. uniprot
Match: A0A836CIY7_9STRA (SMP-LTD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY7_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.200e-8
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0 
Query:  111 RSYLKREGTSLLKATTTLASRTTHGVCRAVNVTGTAASVVTGGVFKLAGAAVLDVVDGMEYASGKS----PVEVP----GVTGEIRPVKQ 192
            +S L+REG  +      ++   +HGVCRAVNVTGT A+ V G +FKLAGAAV+D   G+EYA  ++    P++VP    GVT   + +K+
Sbjct:   86 KSQLQREGKVVFGKLFKVSRHASHGVCRAVNVTGTTAATVAGSLFKLAGAAVMDASQGLEYAQARACAAAPMKVPVLDKGVTLVAKSLKK 175
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6975.18079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LP07_9PHAE2.870e-1165.08SMP-LTD domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CIY7_9STRA3.200e-844.44SMP-LTD domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6975contigF-serratus_M_contig6975:15461..18043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6975.18079.1mRNA_F-serratus_M_contig6975.18079.1Fucus serratus malemRNAF-serratus_M_contig6975 15441..18219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6975.18079.1 ID=prot_F-serratus_M_contig6975.18079.1|Name=mRNA_F-serratus_M_contig6975.18079.1|organism=Fucus serratus male|type=polypeptide|length=193bp
MPSSVFRITTTSSGSNDTSYNGGTGSNLKPVSSPPSNSTIQTTPHTINAD
DIIGEVNSTSRRKRNGGGSDGSSFEANDVEGVYQSTLVYPSPRKETPTSS
SAPSRRKSVKRSYLKREGTSLLKATTTLASRTTHGVCRAVNVTGTAASVV
TGGVFKLAGAAVLDVVDGMEYASGKSPVEVPGVTGEIRPVKQ*
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