prot_F-serratus_M_contig679.17799.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig679.17799.1
Unique Name	prot_F-serratus_M_contig679.17799.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	196

Homology

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BLAST of mRNA_F-serratus_M_contig679.17799.1 vs. uniprot
Match: D7FME6_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME6_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 2.720e-59
Identity = 106/169 (62.72%), Postives = 122/169 (72.19%), Query Frame = 0

Query:   19 MENWTVDPADV-EGPYAPDCSSRAAEGFYSGALLGAVWGVIGRASSNEAMPSKSPSIGALGKSFSPHPPPRQNVGGGGAVGHVRVFARGVAGYATSALSTAGVFGVFVGVLNAGTCACERLRGEKDWINNACGGTAAGLSVALLSRHTRNPRMLAAHAVGGAAITSIVA 186
            ME+W V+P ++    YAPDCSSRAAEGFY GAL GAVWGVIGRA+    +PS +P++G L         P   +   G    VR F RG AGY  +A STAGVFGVFVG++NAGTC CERLRG+KDW NNA GG AAGLSVALLSRHTR P+MLAAH  G AAITS+VA
Sbjct:    1 MEDWNVEPPEMTHKDYAPDCSSRAAEGFYVGALYGAVWGVIGRAAHAPTLPS-TPAMGELKPPSGLQAQPAPGLETRGVSRQVRAFGRGAAGYGIAAASTAGVFGVFVGMVNAGTCGCERLRGKKDWFNNAFGGAAAGLSVALLSRHTRTPQMLAAHVAGAAAITSVVA 168

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig679.17799.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig679.17799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FME6_ECTSI	2.720e-59	62.72	Similar to mitochondrial import inner membrane tra...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 37..181 e-value: 1.2E-13 score: 51.4
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 194..195
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 171..193
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..170
None	No IPR available	TMHMM	TMhelix		coord: 171..193
None	No IPR available	TMHMM	TMhelix		coord: 107..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig679	contig	F-serratus_M_contig679:120736..124070 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig679.17799.1	mRNA_F-serratus_M_contig679.17799.1	Fucus serratus male	mRNA	F-serratus_M_contig679 120167..124802 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig679.17799.1 ID=prot_F-serratus_M_contig679.17799.1|Name=mRNA_F-serratus_M_contig679.17799.1|organism=Fucus serratus male|type=polypeptide|length=196bp
MTKHLQVFSTRTTAMGDGMENWTVDPADVEGPYAPDCSSRAAEGFYSGAL
LGAVWGVIGRASSNEAMPSKSPSIGALGKSFSPHPPPRQNVGGGGAVGHV
RVFARGVAGYATSALSTAGVFGVFVGVLNAGTCACERLRGEKDWINNACG
GTAAGLSVALLSRHTRNPRMLAAHAVGGAAITSIVAIATGGAAGE*