prot_F-serratus_M_contig633.17218.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig633.17218.1
Unique Nameprot_F-serratus_M_contig633.17218.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length205
Homology
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BLAST of mRNA_F-serratus_M_contig633.17218.1 vs. uniprot
Match: D7G7I6_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7I6_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 4.850e-26
Identity = 69/129 (53.49%), Postives = 81/129 (62.79%), Query Frame = 0 
Query:   78 AFATLGFLAPATAFLTGAPRV-SLPTASSHTFHLSQQNMLPSNRGCDVPTSSIRHRRAARGSLSMSTETAVEQKGLVTVYHKETCPYCKEALELLEEGYSLRVTRVDLLEGEDSDKKIKQMKTFSGRNT 205
            A A    L PA+AF+T APRV SLP A         ++   ++ G          R A    LSM +     Q GLVTVYHKETCPYCK+AL LLE  YSL+VTRV++LEGEDS+KKIKQMKTFSG NT
Sbjct:    9 ASAAFASLTPASAFVTTAPRVASLPAAGQQ-----YRSFTSTHAGA---------RGAVAAPLSMMSGDG--QAGLVTVYHKETCPYCKKALALLENDYSLQVTRVNVLEGEDSEKKIKQMKTFSGANT 121
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BLAST of mRNA_F-serratus_M_contig633.17218.1 vs. uniprot
Match: A0A835ZFR3_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.940e-24
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0 
Query:  133 RAARGSLSMSTETAVEQKGLVTVYHKETCPYCKEALELLEEGYSLRVTRVDLLEGEDSDKKIKQMKTFSG-RNT 205
            RA     +MST TAVEQ+GLVTVYHKETCPYC + L LLE  Y+L V RV++LEG+DSDKKIKQM+TFSG RNT
Sbjct:   47 RAGAALTTMSTGTAVEQRGLVTVYHKETCPYCVKVLHLLENEYNLSVNRVNVLEGDDSDKKIKQMRTFSGGRNT 120
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BLAST of mRNA_F-serratus_M_contig633.17218.1 vs. uniprot
Match: A0A836CJB3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.320e-19
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 0 
Query:  145 TAVEQKGLVTVYHKETCPYCKEALELLEEGYSLRVTRVDLLEGEDSDKKIKQMKTFSG-RNT 205
            TA EQ GLVTVYHKETCP+CK+ LELLE  Y L VT+VD+L GEDSDK +KQM+TFSG RNT
Sbjct:    6 TATEQLGLVTVYHKETCPHCKKVLELLEGDYGLEVTKVDVL-GEDSDKVLKQMRTFSGGRNT 66
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BLAST of mRNA_F-serratus_M_contig633.17218.1 vs. uniprot
Match: A0A6S9FTA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FTA2_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 4.100e-10
Identity = 43/97 (44.33%), Postives = 55/97 (56.70%), Query Frame = 0 
Query:  111 SQQNMLPSNRGCDVPTSSIRHRRAARGSLSMSTETAVEQKGLVTVYHKETCPYCKEALELLEEGYSLRVTRVDLLEGEDSDKKIKQ--MKTFSGRNT 205
            +Q N+L        PT   R    ARG +        +Q G+VT+Y K TCP+CKEA  LLE  Y L +T VD+LEGE+ ++K KQ  MK FS R T
Sbjct:   22 TQSNVLSRTYVKAAPT---RPNLGARGMMM------ADQAGIVTMYIKSTCPFCKEAKALLEGEYGLNLTVVDVLEGEEGEQKAKQRQMKQFSFRKT 109
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig633.17218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G7I6_ECTSI4.850e-2653.49Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835ZFR3_9STRA7.940e-2470.27Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836CJB3_9STRA4.320e-1974.19Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A6S9FTA2_HETAK4.100e-1044.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 153..197
e-value: 1.6E-5
score: 25.0
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 141..205
score: 10.172
NoneNo IPR availableGENE3D3.40.30.10coord: 137..205
e-value: 5.8E-8
score: 34.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..205
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..73
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 155..171
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 149..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig633contigF-serratus_M_contig633:109944..114004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig633.17218.1mRNA_F-serratus_M_contig633.17218.1Fucus serratus malemRNAF-serratus_M_contig633 109944..114004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig633.17218.1 ID=prot_F-serratus_M_contig633.17218.1|Name=mRNA_F-serratus_M_contig633.17218.1|organism=Fucus serratus male|type=polypeptide|length=205bp
ENRGIRSVVPAIPRLPSIDKLSEFNSPLLPDISLELERHRTVETQNRRWT
RVLTQQQMKPFSSRIVVVSGARRWIAFAFATLGFLAPATAFLTGAPRVSL
PTASSHTFHLSQQNMLPSNRGCDVPTSSIRHRRAARGSLSMSTETAVEQK
GLVTVYHKETCPYCKEALELLEEGYSLRVTRVDLLEGEDSDKKIKQMKTF
SGRNT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002109Glutaredoxin
IPR011767GLR_AS
IPR036249Thioredoxin-like_sf