prot_F-serratus_M_contig6329.17214.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6329.17214.1
Unique Nameprot_F-serratus_M_contig6329.17214.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length483
Homology
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BLAST of mRNA_F-serratus_M_contig6329.17214.1 vs. uniprot
Match: D7FVI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI5_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 2.880e-101
Identity = 178/328 (54.27%), Postives = 218/328 (66.46%), Query Frame = 0 
Query:   57 NLEGLSADEVEERLIAAGILHRDGAV--FDVDELGGGGVYNEVDIPDGFEACQILVDSLGFDETEINYLRDKYAPLRGEPWYRREPIPG-SKIGKKVLDIFFLKETLPELLNLLLGDEKDGG-VGLSTEQVRGMLLRTPALAGVEPFDAGEVVSYMRGELGFNGKGQLAAALAGCPPMLMYNAQNNLHKK-----------VQYYRDALSWSTEDIRSLMAEYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRPKRLKAVVTYLRKVLDIPWGGVADILRQNPKTCSLEAEANLAPLRHFFERELFVEDSARIG 369
            +LEGLSADEVE+RLIAAGIL  DGA   F+ D+ GG GVYNE+++ DG EACQIL + LGFDE  I +LR KY PLRGE WYRREP  G SK GKK LD++F++ETLP+LL+LLLG+E +GG VGL  +QVR ML  TP+L G++  DA +V  Y+R ELG +GKGQLA+ALAGCPPMLMY+  +NL  K           V YYR++L+W+ ED+ +++AEYP                                         VRPKRLKAVV Y  KVL+IP  G+A +L Q+P+TC LEAEANLAPLR FFERELFVE S   G
Sbjct:  152 SLEGLSADEVEQRLIAAGILRGDGAEIDFEEDDGGGAGVYNEIEVSDGEEACQILEERLGFDEEGIAHLRSKYPPLRGELWYRREPASGGSKTGKKFLDVYFVEETLPDLLDLLLGEEGEGGGVGLDRKQVREMLTTTPSLVGMDVSDAKDVAGYLRSELGLSGKGQLASALAGCPPMLMYHTWDNLRMKYDNNDDGDDDQVSYYRESLAWTNEDVAAMLAEYPNLLSIKMENDVIEVIDYLRTEVGLQPLTVSGMVREFPQVLEVRPKRLKAVVRYFWKVLEIPRSGIAVLLSQHPRTCCLEAEANLAPLRQFFERELFVEASTVNG 479
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BLAST of mRNA_F-serratus_M_contig6329.17214.1 vs. uniprot
Match: A0A6H5JYV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV1_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 2.570e-94
Identity = 207/382 (54.19%), Postives = 247/382 (64.66%), Query Frame = 0 
Query:   57 NLEGLSADEVEERLIAAGILHRDGAV--FDVDELGGGGVYNEVDIPDGFEACQILVDSLGFDETEINYLRDKYAPLRGEPWYRREPIPG-SKIGKKVLDIFFLKETLPELLNLLLGDEKDGG-VGLSTEQVRGMLLRTPALAGVEPFDAGEVVSYMRGELGFNGKGQLAAALAGCPPMLMYNAQNNLHKKVQYYRDALSWSTEDIRSLMAEYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRPKRLKAVVTY------------------LRKVLDIPWGGVADILRQNPKTCSLEAEANLAPLRHFFERELFVEDSARIGRLVCKFPRLLLQDVETQLKPRAEEFRKALGLEGMEPVPPPVRSRPKR 416
            +LEGLSADEVE RLIAAGIL  DGA   FD D+ G  GVYNE+++ DG EAC+IL + LGFDE  I YLR KY PLRGE WYRREP  G SK GKK LD++F++ETLP+LL+LLLG+E +GG +GL  +Q RG            P D+     +                              ++   V YYR+AL+W++ED+ +++AEYP                XXXXXXXXXXXXXXXXXXXXXXXX VRPKRLKAVV                    L  VL+IP  G+A +L Q+P+ C LEAEANLAPLR FFERELFVED++RIG LV KFPRLL QDV+TQL PRAEEFRKA+GLEG+EP+PP VR RPKR
Sbjct:  228 SLEGLSADEVERRLIAAGILRGDGAEIDFDEDDDGEAGVYNEIEVSDGEEACRILEERLGFDEEGIGYLRSKYPPLRGELWYRREPASGGSKTGKKFLDVYFVEETLPDLLDLLLGEEGEGGGIGLDRKQARG------------PADSSHSEQFW----------------------------GDVDADVSYYREALAWTSEDVAAMLAEYPNLLSIKMENDVIEVIDXXXXXXXXXXXXXXXXXXXXXXXXEVRPKRLKAVVRKKGTELELQAFESKEVLGTLSSVLEIPRSGIAVLLSQHPRACCLEAEANLAPLRQFFERELFVEDTSRIGHLVYKFPRLLFQDVDTQLVPRAEEFRKAMGLEGLEPLPPRVRLRPKR 569
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BLAST of mRNA_F-serratus_M_contig6329.17214.1 vs. uniprot
Match: A0A835YN67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN67_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.530e-38
Identity = 108/362 (29.83%), Postives = 164/362 (45.30%), Query Frame = 0 
Query:   98 DIPDGFEACQILVDSLGFDETEINYLRDKYAPLRGEPWYRREPIPGSKIGKKVLDIFFLKETLPELLNLLLGDEKDGGVGLSTEQVRGMLLRTPALAGVEPFDAGEVVSYMRGELGFNGKGQLAAALAGCPPMLMYNAQNNLHKKVQYYRDALSWSTEDIRSLMAEYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---RPKRLKAVVTYLRK------------------------------------VLDIPWGGVADILRQNPKTCSLEAEANLAPLRHFFERELFVEDSARIGRLVCKFPRLLLQDVETQLKPRAEEFRKALGLEGMEPVPPPVRSRPKRGNNR 420
            D   G EA + L++ +G     +  L +++APLRGE WYRR      + GKKVLD++FL++TLP+L+ LL   E+   +G S E++       P+L G E  +    + Y+R      G G+L  AL+ CP +L+Y+A+ NL  K  Y    L  +   +R LM +YP                                         V   + KR+KA++ YL+K                                    VL +       ++  +P+   +EAE +LAPLRHFFE +L + D+ RIG +V K P++L  D+ET+L+P+A + R  LG+      P P   RP R   R
Sbjct:   58 DFDGGAEAQRFLIEDVGLAPAAVAALAERFAPLRGEMWYRR------RNGKKVLDVYFLEDTLPDLVELLEAPEE---LGWSQEEMAAAFAVVPSLLGREAAEVAASLRYVREXXXXEG-GELRGALSACPSLLLYDARTNLRAKHAYLTRHLGLTPAQLRELMLKYPRMFDVAFTGEGKSSIASLDVLLDSGMTTHMACQLVVAEPELVAEAKGKRVKALMHYLQKWRRLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKLEPEVATRLVCSHPRLLGMEAEKDLAPLRHFFEYDLCITDTRRIGSIVAKLPQILFMDLETELRPKAADIRAKLGIPDDAAPPRPRAPRPTRAEQR 409
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6329.17214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVI5_ECTSI2.880e-10154.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYV1_9PHAE2.570e-9454.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YN67_9STRA4.530e-3829.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 331..362
e-value: 1900.0
score: 1.7
coord: 184..215
e-value: 2700.0
score: 0.5
coord: 221..253
e-value: 95.0
score: 11.8
coord: 369..401
e-value: 0.0033
score: 26.6
coord: 258..290
e-value: 0.22
score: 20.6
coord: 295..326
e-value: 2.2
score: 17.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 212..402
e-value: 2.2E-16
score: 59.7
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 173..331
e-value: 1.0E-17
score: 66.2
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 177..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6329contigF-serratus_M_contig6329:18776..23397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6329.17214.1mRNA_F-serratus_M_contig6329.17214.1Fucus serratus malemRNAF-serratus_M_contig6329 18582..23397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6329.17214.1 ID=prot_F-serratus_M_contig6329.17214.1|Name=mRNA_F-serratus_M_contig6329.17214.1|organism=Fucus serratus male|type=polypeptide|length=483bp
MIDEAEASEGWGGIPSPVRIVSDYKVNSGSDADAEVDHVPASSDCTEITD
KEKNTANLEGLSADEVEERLIAAGILHRDGAVFDVDELGGGGVYNEVDIP
DGFEACQILVDSLGFDETEINYLRDKYAPLRGEPWYRREPIPGSKIGKKV
LDIFFLKETLPELLNLLLGDEKDGGVGLSTEQVRGMLLRTPALAGVEPFD
AGEVVSYMRGELGFNGKGQLAAALAGCPPMLMYNAQNNLHKKVQYYRDAL
SWSTEDIRSLMAEYPNLLSVKMEEDVIEIVEYLRSEIGLQPATVTAMVRE
YPPILDVRPKRLKAVVTYLRKVLDIPWGGVADILRQNPKTCSLEAEANLA
PLRHFFERELFVEDSARIGRLVCKFPRLLLQDVETQLKPRAEEFRKALGL
EGMEPVPPPVRSRPKRGNNRPGDAGLDSNGRGRVSASGARRKERSSGYSG
EDRGNSRSGAGYGGQSRKGRSNGRGRGGGVVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf