prot_F-serratus_M_contig6325.17212.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6325.17212.1
Unique Nameprot_F-serratus_M_contig6325.17212.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length356
Homology
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 2.190e-102
Identity = 176/330 (53.33%), Postives = 220/330 (66.67%), Query Frame = 0
Query:   26 QVVLQKGLRGASLREIKEDIKVLLLIPYKGRGFKLPRLVYSDMCCNDREVFMEMYEELRAMGLEIKVEDETPADVSLPNFMLPSDVKVRCAVA--DDGDVLSSLCDEIRTQAAGNGGVVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASLTFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKRSLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVSTILHSCIEEKSVPIFKEGEDLQAGDHVRLYTRTGNACVGVGVVQECEGQVWGSTGILLVPAMTTR 353
            +VVLQK L+ ASLRE+K+D+K L +  Y G GFKLPRLV +D CCND+ +  E++EEL + G +  V +  P     P   LP DV +   V    D   L +  D IR QA  N G++  DIEW+I+ +GA  NPPAT QLAAGK V++  +LHGQ++   +LP  LV LLED  LT TGVGI GD TR+  F+GV+VAHAVDL  LA+ RKV LGL+R LADLC HLLG+ L KD  VRLS+WN+ DLS++QK YAALDAY   +LH  I E S  IF++ E+L  GD VRLYTR GN CVG G + E   + WG+TG  LVP   TR
Sbjct:  136 EVVLQKALQSASLRELKQDLKALFITRYTGGGFKLPRLVSTDECCNDKALLNEIFEELASEGHQFSVTNSVPIASECPVLHLPPDVVLGEPVKANQDSPCLKAAVDAIRMQAEANNGLLALDIEWEISAAGAPANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFRDAEELHVGDRVRLYTRAGNDCVGEGCIVEHTDETWGTTGFYLVPRRATR 465          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A6H5KFL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL9_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 4.430e-26
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 0
Query:    1 MARIR--GGGIDTQPFYCIMTIYNEFQQ-----VVLQKGLRGASLREIKEDIKVLLLIPYKGRGFKLPRLVYSDMCCNDREVFMEMYEELRAMGLEIKVEDETPADVSLPNFMLPSDVKVRCAVA--DDGDVLSSLCDEIRTQA 135
            + R+R  G   DT+PF+C++T++NEF+Q     VVLQK L+  SLRE+K+D+K L +  YKG GFKLPRLV +D CCND+ +  +++EEL + G +  V +  P     P   LP DV +   V    D   L +  D  R QA
Sbjct:  125 LVRVRAPGAAADTKPFHCVVTLFNEFEQATQIVVVLQKALQSGSLRELKQDLKALFVTRYKGGGFKLPRLVSTDECCNDKALLNDIFEELASEGHQFSVTNSVPIASECPVLQLPPDVVLGEPVKANQDSPCLKAAVDTTRMQA 268          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 4.730e-20
Identity = 58/123 (47.15%), Postives = 74/123 (60.16%), Query Frame = 0
Query:  231 LALIRKVPLGLKRSLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVSTILHSCIEEKSVPIFKEGEDLQAGDHVRLYTRTGNACVGVGVVQECEGQVWGSTGILLVPAMTTR 353
            +A+ RKV L  +R LADLC +LL + L KD  VRLS+WN+ DLS++QK                I E S  IF++ E++  GD VRLYTR GN CVG G + E   + WG+TGI LVP   TR
Sbjct:    1 MAVERKVELWFRRGLADLCVNLLEKQLPKDPIVRLSKWNKLDLSDDQKRR--------------IGELSDSIFRDAEEMHVGDSVRLYTRAGNDCVGEGCIVEHTDETWGTTGIYLVPRRATR 109          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A6P5EXU7_ANACO (Werner Syndrome-like exonuclease n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EXU7_ANACO)

HSP 1 Score: 91.7 bits (226), Expect = 4.020e-18
Identity = 61/150 (40.67%), Postives = 80/150 (53.33%), Query Frame = 0
Query:  141 VVGFDIEWDIALS-GAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASLTFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKR-SLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVS 288
            VVG D EW    S GA  NP A  QL  G+  LV  +LH    P      +L   L D    F GVG+ GD  R+    G+ VA AVDL  LA  R     LK+  LA L + ++   + K  RVR+SRW+R+DL+ +Q  YA +DA++S
Sbjct:   53 VVGLDAEWRPNFSAGAAPNPVALVQLCVGRRCLVFSLLHADYVPL-----ALANFLADTRFAFVGVGVAGDAERLADECGLPVADAVDLRDLAAERTGRRQLKQMGLAGLAAEIMEVEVRKPSRVRMSRWDRRDLTLDQIGYACVDAFLS 197          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A168MFQ8_MUCCL (3'-5' exonuclease domain-containing protein n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A168MFQ8_MUCCL)

HSP 1 Score: 94.0 bits (232), Expect = 1.420e-17
Identity = 77/288 (26.74%), Postives = 140/288 (48.61%), Query Frame = 0
Query:   10 DTQPFYCIMTIYNEFQQVVLQKGLRGASLREIKEDIKVLLLIPYKGRGFKLPRLVYSDMCCNDREVFMEMYEELRAMGLEIKVEDETPADVSLPNFMLPSDVKVRCAVADDG---DVLSSLCDEIRTQA-AGNGGVVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASLTFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKRSLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVSTILHS 293
            D   F  + T+ NE++++V Q  +   SL  +K  ++ +    Y   G ++P   ++D   +D+     +++ L+   +E   +  T +  S     LPSD+++R    D G   + + SL D++  +  AG   V+G D EW++     H+      Q+A G     + ILH  ++ +T L   LV LL  + +T  G  + GD++RI K FG+     ++L      R++      SL+D+   +LG  + K    + S WN  DL+   + YAA+DA+ S  +++
Sbjct:   44 DASVFTTLFTVTNEYEEIVHQVLVPSKSLLYLKHSLEKMKEA-YDLYGHEMPVAFFTDNVQSDKRFLEGIFDSLKV--IEKPPQQATGSSESRSFLTLPSDIEMRYVNRDIGRIVETMKSLSDKLEVERNAGKPLVIGLDTEWNVDDDPQHDQVDL-IQIAHGN---TIDILHIDRSWNT-LSEELVNLLVKSDITKVGRNVGGDFSRINKRFGIVCQMKLELGSFCSQRQLVSNGLMSLSDISLCILGAPIDKG--PQRSVWNIADLAANLQMYAAIDAWASLAIYN 321          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: UPI000CD66FFB (Werner syndrome ATP-dependent helicase n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD66FFB)

HSP 1 Score: 93.6 bits (231), Expect = 4.580e-17
Identity = 66/175 (37.71%), Postives = 88/175 (50.29%), Query Frame = 0
Query:  125 SSLCDEIRTQAAGNGGVVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASLTFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKRSLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVSTILHSCIEEKS 299
            S L +++R+Q    G  VGFD+EW  + +   +   A  QL        L  L          P  L  LLED ++   GVGI GD  R+   F +K+ + ++LT LA   K+    K SL  L  HL  R L KD  VR S WN  DL+EEQK YAA DAY   I+++ +E  S
Sbjct:   57 SFLSEDLRSQLT-PGSAVGFDMEWPPSFTKGQKQKVALIQLCVSDHKCYLFHLSSM----LGFPAGLKMLLEDDTIKKVGVGIEGDMWRLLSDFDIKLKNFLELTDLA-NEKLRCAEKWSLDGLVKHLFNRQLKKDRDVRCSSWNDFDLTEEQKRYAATDAYAGLIVYNKLETMS 225          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A199VKE8_ANACO (Werner Syndrome-like exonuclease n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199VKE8_ANACO)

HSP 1 Score: 91.7 bits (226), Expect = 6.970e-17
Identity = 61/150 (40.67%), Postives = 80/150 (53.33%), Query Frame = 0
Query:  141 VVGFDIEWDIALS-GAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASLTFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKR-SLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVS 288
            VVG D EW    S GA  NP A  QL  G+  LV  +LH    P      +L   L D    F GVG+ GD  R+    G+ VA AVDL  LA  R     LK+  LA L + ++   + K  RVR+SRW+R+DL+ +Q  YA +DA++S
Sbjct:  252 VVGLDAEWRPNFSAGAAPNPVALVQLCVGRRCLVFSLLHADYVPL-----ALANFLADTRFAFVGVGVAGDAERLADECGLPVADAVDLRDLAAERTGRRQLKQMGLAGLAAEIMEVEVRKPSRVRMSRWDRRDLTLDQIGYACVDAFLS 396          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A3B3QYL5_9TELE (DNA helicase n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QYL5_9TELE)

HSP 1 Score: 92.0 bits (227), Expect = 1.390e-16
Identity = 65/164 (39.63%), Postives = 83/164 (50.61%), Query Frame = 0
Query:  125 SSLCDEIRTQAAGNGGVVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASLTFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKRSLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVS 288
            S L +++R+Q    G  VGFD+EW  + +   +   A  QL        L  L          P  L  LLED ++   GVGI GD  R+   F +K+ + ++LT LA   K+    K SL  L  HL  R L KD  VR S WN  DL+EEQK YAA DAYVS
Sbjct:   20 SFLSEDLRSQLT-PGSAVGFDMEWPPSFTKGQKQKVALIQLCVSDHKCYLFHLSSM----LGFPAGLKMLLEDDTIKKVGVGIEGDMWRLLSDFDIKLKNFLELTDLA-NEKLRCAEKWSLDGLVKHLFNRQLKKDRDVRCSSWNDFDLTEEQKRYAATDAYVS 177          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A3B3QY10_9TELE (DNA helicase n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QY10_9TELE)

HSP 1 Score: 92.0 bits (227), Expect = 1.390e-16
Identity = 65/164 (39.63%), Postives = 83/164 (50.61%), Query Frame = 0
Query:  125 SSLCDEIRTQAAGNGGVVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASLTFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKRSLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVS 288
            S L +++R+Q    G  VGFD+EW  + +   +   A  QL        L  L          P  L  LLED ++   GVGI GD  R+   F +K+ + ++LT LA   K+    K SL  L  HL  R L KD  VR S WN  DL+EEQK YAA DAYVS
Sbjct:   50 SFLSEDLRSQLT-PGSAVGFDMEWPPSFTKGQKQKVALIQLCVSDHKCYLFHLSSM----LGFPAGLKMLLEDDTIKKVGVGIEGDMWRLLSDFDIKLKNFLELTDLA-NEKLRCAEKWSLDGLVKHLFNRQLKKDRDVRCSSWNDFDLTEEQKRYAATDAYVS 207          
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Match: A0A3B3QYM0_9TELE (DNA helicase n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QYM0_9TELE)

HSP 1 Score: 90.9 bits (224), Expect = 2.420e-16
Identity = 64/164 (39.02%), Postives = 83/164 (50.61%), Query Frame = 0
Query:  125 SSLCDEIRTQAAGNGGVVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASLTFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKRSLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVS 288
            S L +++R+Q    G  VGFD+EW  + +   +   A  QL        L  L          P  L  LLED ++   GVGI GD  R+   F +K+ + ++LT LA   K+    K SL  L  HL  R L KD  VR S WN  DL+EEQK YAA DAYV+
Sbjct:   56 SFLSEDLRSQLT-PGSAVGFDMEWPPSFTKGQKQKVALIQLCVSDHKCYLFHLSSM----LGFPAGLKMLLEDDTIKKVGVGIEGDMWRLLSDFDIKLKNFLELTDLA-NEKLRCAEKWSLDGLVKHLFNRQLKKDRDVRCSSWNDFDLTEEQKRYAATDAYVT 213          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6325.17212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE2.190e-10253.333'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KFL9_9PHAE4.430e-2642.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEU8_9PHAE4.730e-2047.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P5EXU7_ANACO4.020e-1840.67Werner Syndrome-like exonuclease n=1 Tax=Ananas co... [more]
A0A168MFQ8_MUCCL1.420e-1726.743'-5' exonuclease domain-containing protein n=2 Ta... [more]
UPI000CD66FFB4.580e-1737.71Werner syndrome ATP-dependent helicase n=1 Tax=Par... [more]
A0A199VKE8_ANACO6.970e-1740.67Werner Syndrome-like exonuclease n=1 Tax=Ananas co... [more]
A0A3B3QYL5_9TELE1.390e-1639.63DNA helicase n=2 Tax=Paramormyrops kingsleyae TaxI... [more]
A0A3B3QY10_9TELE1.390e-1639.63DNA helicase n=1 Tax=Paramormyrops kingsleyae TaxI... [more]
A0A3B3QYM0_9TELE2.420e-1639.02DNA helicase n=1 Tax=Paramormyrops kingsleyae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 115..300
e-value: 4.1E-7
score: 39.6
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 130..297
e-value: 3.4E-12
score: 46.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 102..303
e-value: 7.5E-41
score: 141.5
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 110..289
NoneNo IPR availablePANTHERPTHR13620:SF65coord: 110..289
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 138..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6325contigF-serratus_M_contig6325:25621..27294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6325.17212.1mRNA_F-serratus_M_contig6325.17212.1Fucus serratus malemRNAF-serratus_M_contig6325 24939..27924 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6325.17212.1 ID=prot_F-serratus_M_contig6325.17212.1|Name=mRNA_F-serratus_M_contig6325.17212.1|organism=Fucus serratus male|type=polypeptide|length=356bp
MARIRGGGIDTQPFYCIMTIYNEFQQVVLQKGLRGASLREIKEDIKVLLL
IPYKGRGFKLPRLVYSDMCCNDREVFMEMYEELRAMGLEIKVEDETPADV
SLPNFMLPSDVKVRCAVADDGDVLSSLCDEIRTQAAGNGGVVGFDIEWDI
ALSGAHENPPATFQLAAGKFVLVLQILHGQKTPSTKLPGSLVGLLEDASL
TFTGVGINGDYTRIEKFFGVKVAHAVDLTKLALIRKVPLGLKRSLADLCS
HLLGRSLSKDGRVRLSRWNRKDLSEEQKTYAALDAYVSTILHSCIEEKSV
PIFKEGEDLQAGDHVRLYTRTGNACVGVGVVQECEGQVWGSTGILLVPAM
TTRAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf