prot_F-serratus_M_contig632.17187.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig632.17187.1
Unique Nameprot_F-serratus_M_contig632.17187.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length320
Homology
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BLAST of mRNA_F-serratus_M_contig632.17187.1 vs. uniprot
Match: A0A6H5KRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA3_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.930e-42
Identity = 95/219 (43.38%), Postives = 121/219 (55.25%), Query Frame = 0 
Query:   50 NSSSIGNLSKKETPATENGAESDAKGAKIAAAMRTELQSSCLGGSVDGDN-FSDGYIYKDPAPLKWRIFEAVAKTNGQRAFARYWSTLRNFLRGWIPRSDLDEELIASLGAENVHLHNELVLCLINNAHCRYIPAELMSQVPPSCRSAVVH---------------------------------GMRTTEAPPPASPSKPSPGATASLPFQGKRKEGFL 234
            NS  +  + +   P + N   S   G  +A A+  EL ++  GG+  G N  +D ++Y+DP  LKW+IFEAVAK NGQRAF  YWS LR+F+ GW+ R  LDE L ASLGA+N+HLHNEL+LCL+NNA CRY+PA+L+SQVP S R  VVH                                        PP  +    +  A ASLPFQGKR EG L
Sbjct:   16 NSDRLVKVEQPTVPRSSNTGSSADHGVSMAEAVAAELAAAETGGTGGGQNAVTDEHLYQDPGSLKWKIFEAVAKANGQRAFETYWSALRDFMHGWLSRGGLDEALDASLGADNLHLHNELILCLLNNARCRYLPADLVSQVPASFRGKVVHTTAXXXXXXXXXXXXXXXXXXXXXXXXXXPVLXXXXXXXXPPCGNSGLSNAAAAASLPFQGKRAEGLL 234
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BLAST of mRNA_F-serratus_M_contig632.17187.1 vs. uniprot
Match: D8LER5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER5_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 1.420e-41
Identity = 76/123 (61.79%), Postives = 96/123 (78.05%), Query Frame = 0 
Query:   78 IAAAMRTELQSSCLGGSVDGDN-FSDGYIYKDPAPLKWRIFEAVAKTNGQRAFARYWSTLRNFLRGWIPRSDLDEELIASLGAENVHLHNELVLCLINNAHCRYIPAELMSQVPPSCRSAVVH 199
            +A A+  EL ++  GG+  G N  +D ++Y+DPA LKW+IFEAVAK NGQRAF  YWS LR+F+ GW+PR  LDE L ASLGA+N+HLHNEL+LCL+NNA CRY+PA+L+SQVP S R  VVH
Sbjct:    1 MAEAVAAELAAAETGGTGGGQNAVTDEHLYQDPASLKWKIFEAVAKANGQRAFETYWSALRDFMHGWLPRGGLDEALDASLGADNLHLHNELILCLLNNARCRYLPADLVSQVPASFRGKVVH 123
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig632.17187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRA3_9PHAE1.930e-4243.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LER5_ECTSI1.420e-4161.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1PFAMPF12767SAGA-Tad1coord: 121..193
e-value: 1.5E-12
score: 47.8
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1PANTHERPTHR21277FAMILY NOT NAMEDcoord: 125..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig632contigF-serratus_M_contig632:129088..134147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig632.17187.1mRNA_F-serratus_M_contig632.17187.1Fucus serratus malemRNAF-serratus_M_contig632 129088..134148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig632.17187.1 ID=prot_F-serratus_M_contig632.17187.1|Name=mRNA_F-serratus_M_contig632.17187.1|organism=Fucus serratus male|type=polypeptide|length=320bp
MRKNVSLGGSKPMKSTTSSHFSSSSSSSVTGEIKKLIKTEDNNLMKRDAN
SSSIGNLSKKETPATENGAESDAKGAKIAAAMRTELQSSCLGGSVDGDNF
SDGYIYKDPAPLKWRIFEAVAKTNGQRAFARYWSTLRNFLRGWIPRSDLD
EELIASLGAENVHLHNELVLCLINNAHCRYIPAELMSQVPPSCRSAVVHG
MRTTEAPPPASPSKPSPGATASLPFQGKRKEGFLATKMEVVRKDAPPTAR
EAKVRGKAGGAFAVAAAPEGGNSLREGLSGGGLRPPALDSRDGSCYSRSL
ASLSSAKKQAETKPKPAVGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024738Hfi1/Tada1