prot_F-serratus_M_contig630.17153.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig630.17153.1
Unique Nameprot_F-serratus_M_contig630.17153.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length456
Homology
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: D8LS07_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS07_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 5.520e-79
Identity = 161/381 (42.26%), Postives = 196/381 (51.44%), Query Frame = 0
Query:   10 EMVEIEEGRPAGPRWAEVQQESVRTQRADVAALWCRRVAGLLVWGFVGVIISQLWTVAWKLRDVKLLALCLLITASLLYIFYKRYRHIREIGLTGVDLVRAMTVDDGENGGLHGVTRKARSSCVDFKFDPSATFQERPLGRGFERYPPPIEVAGNASSLSSPGDGVREDDEAKAAARKRRRGIPSWLWCWDRNVRNDQEASPDEASISTSTNLRRTGTASTSASAGVPPSIATVAVGEELRPPSPGKNLFLDDF---EIEHLEVSTADMAAAGEMPGVGGCL-EAVAARAATGREATATRRGSWVRETGVGPRARGGQVVRACELNPSCCVCLFDYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADINVWATVGG 386
            E +E+EEGR AGPRWA++++ESVR  RADVAALWCRR+AGLLVWGFV  I SQLW VAW+L+D+KL+ +CLL+T SLLY+  KRY++IRE GL+GV+LVRA+ VDD     L GV+RKAR+ C+DFK+DP   F+ER  GRGFE YP      G ASS                                                                                       G N   +                  +A +  GV G   E V++ +     A   +               G QV+RA ELN SC VCLF Y++DE VTLLPCGHLYHTECIDIWM DHVDCPYCRAD+NVW   GG
Sbjct:   11 ETLELEEGRVAGPRWAQLEEESVRDHRADVAALWCRRIAGLLVWGFVAFIFSQLWEVAWELKDLKLMGVCLLVTVSLLYVLVKRYQNIRETGLSGVELVRALAVDDPGGVRLRGVSRKARAMCIDFKYDPEGVFRERSAGRGFEMYPTQ-RPGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXXGANDTEETLITRRXXXXXXXXXXXXSAAKPSGVSGSANEGVSSNSNNPDAAELGQPXXXXXXXPAYLERDGRQVIRASELNASCSVCLFGYFVDEAVTLLPCGHLYHTECIDIWMRDHVDCPYCRADMNVWCNSGG 374          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: D8LAX1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX1_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 5.350e-12
Identity = 33/69 (47.83%), Postives = 43/69 (62.32%), Query Frame = 0
Query:  312 ETGVGPRARGGQVVRACELNPSCCVCLFDYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADINV 380
            +T V  RA    VVR  EL   C +CL  Y   EEV +LPC H++H EC+D+W+  H  CPYC+ D+NV
Sbjct:  301 DTAVRLRANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNV 369          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: A0A6H5JT04_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT04_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.830e-11
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 0
Query:  318 RARGGQVVRACELNPSCCVCLFDYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADINV 380
            RA    VVR  EL   C +CL  Y   EEV +LPC H++H EC+D+W+  H  CPYC+ D+NV
Sbjct:  401 RANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWICGHPSCPYCKGDLNV 463          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: A0A7R9U2I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2I9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.060e-9
Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 0
Query:  317 PRARGGQVVRACELNPSCCVCLFDYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADI 378
            P  +  QV    + N SCC+C+ D+ L E  T LPCGH++HTECI  W+  H  CP CR ++
Sbjct:  189 PEVKVSQVDLETDGNESCCICMEDHELGEMATKLPCGHIFHTECIKDWLQRHCTCPVCRFEL 250          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: A0A024G169_9STRA (RING-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G169_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 6.080e-9
Identity = 24/49 (48.98%), Postives = 38/49 (77.55%), Query Frame = 0
Query:  331 NPSCCVCLFDYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADIN 379
            +PSCC+CL D+ L+E++ LLPC H +H++C+D W+S +  CP CR +I+
Sbjct:  254 DPSCCICLCDFELNEKIRLLPCDHHFHSDCVDEWLSLNATCPTCRINIS 302          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: A0A7S1VRK2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VRK2_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 7.610e-9
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  332 PSCCVCLFDYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADI 378
            PSC +CL +Y   E++  LPCGH+YH EC+D W ++HV CP C  D+
Sbjct:  148 PSCTICLGEYEEGEKLVKLPCGHVYHEECVDSWTTNHVRCPLCNFDL 194          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: D8SNW3_SELML (RING-type domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SNW3_SELML)

HSP 1 Score: 62.4 bits (150), Expect = 7.800e-9
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  332 PSCCVCLFDYYLDEEVTLLP-CGHLYHTECIDIWMSDHVDCPYCRADI 378
            P C VCL  +  +E+V LLP CGHL+H +CID+W+  H  CP CR ++
Sbjct:   28 PECTVCLLQFEENEQVRLLPDCGHLFHADCIDMWLETHSTCPLCRRNL 75          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: A0A7S2HAW0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HAW0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.170e-8
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  332 PSCCVCLFDYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADI 378
            PSC +CL +Y   E +T LPCGH+YH EC+  W+S+HV CP C  D+
Sbjct:  372 PSCSICLCEYEEGESLTRLPCGHVYHEECVSAWVSNHVRCPLCNYDL 418          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: A0A804JMS8_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JMS8_MUSAM)

HSP 1 Score: 67.0 bits (162), Expect = 1.570e-8
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0
Query:  334 CCVCLFDYYLDEEVTLLP-CGHLYHTECIDIWMSDHVDCPYCRADINVWATVGG 386
            C VCL ++  D+E+ LLP C HL+HT+CID+W++ HV CP CRA++   AT  G
Sbjct:  143 CAVCLSEFDDDDELRLLPRCSHLFHTDCIDVWLASHVTCPVCRANLAEPATADG 196          
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Match: A0A7R9Z645_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z645_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.200e-8
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  332 PSCCVCLFDYYLDEEVTLLPCGHLYHTECIDIWMSDHVDCPYCRADI 378
            PSC +CL DY   E +  LPCGH+YH EC+  W+S+HV CP C  D+
Sbjct:  332 PSCSICLGDYEEGERLIRLPCGHVYHEECVSAWVSNHVRCPLCNYDL 378          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig630.17153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS07_ECTSI5.520e-7942.26RING-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LAX1_ECTSI5.350e-1247.83RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JT04_9PHAE2.830e-1149.21RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7R9U2I9_9STRA2.060e-945.16Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A024G169_9STRA6.080e-948.98RING-type domain-containing protein n=1 Tax=Albugo... [more]
A0A7S1VRK2_9STRA7.610e-951.06Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
D8SNW3_SELML7.800e-950.00RING-type domain-containing protein (Fragment) n=3... [more]
A0A7S2HAW0_9STRA1.170e-853.19Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A804JMS8_MUSAM1.570e-851.85(wild Malaysian banana) hypothetical protein n=1 T... [more]
A0A7R9Z645_9STRA2.200e-853.19Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 334..374
e-value: 1.5E-5
score: 34.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 333..375
e-value: 5.7E-10
score: 39.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 334..375
score: 12.106
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 324..385
e-value: 1.7E-14
score: 54.7
NoneNo IPR availablePANTHERPTHR45676:SF33RING-H2 FINGER PROTEIN ATL54coord: 331..383
NoneNo IPR availablePANTHERPTHR45676FAMILY NOT NAMEDcoord: 331..383
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..455
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..72
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 330..381
NoneNo IPR availableTMHMMTMhelixcoord: 74..91
NoneNo IPR availableTMHMMTMhelixcoord: 42..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig630contigF-serratus_M_contig630:96964..151433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig630.17153.1mRNA_F-serratus_M_contig630.17153.1Fucus serratus malemRNAF-serratus_M_contig630 95725..151504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig630.17153.1 ID=prot_F-serratus_M_contig630.17153.1|Name=mRNA_F-serratus_M_contig630.17153.1|organism=Fucus serratus male|type=polypeptide|length=456bp
MEQETRRIDEMVEIEEGRPAGPRWAEVQQESVRTQRADVAALWCRRVAGL
LVWGFVGVIISQLWTVAWKLRDVKLLALCLLITASLLYIFYKRYRHIREI
GLTGVDLVRAMTVDDGENGGLHGVTRKARSSCVDFKFDPSATFQERPLGR
GFERYPPPIEVAGNASSLSSPGDGVREDDEAKAAARKRRRGIPSWLWCWD
RNVRNDQEASPDEASISTSTNLRRTGTASTSASAGVPPSIATVAVGEELR
PPSPGKNLFLDDFEIEHLEVSTADMAAAGEMPGVGGCLEAVAARAATGRE
ATATRRGSWVRETGVGPRARGGQVVRACELNPSCCVCLFDYYLDEEVTLL
PCGHLYHTECIDIWMSDHVDCPYCRADINVWATVGGGAAAGSGPVNCPNR
TSAAVAPAPPGEPSPPYRSATSTFPAASASSVAASITPNTPPPTTRSTNS
TNSNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD