prot_F-serratus_M_contig6223.17071.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6223.17071.1
Unique Nameprot_F-serratus_M_contig6223.17071.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length172
Homology
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: D7FQZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ0_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.170e-79
Identity = 139/177 (78.53%), Postives = 153/177 (86.44%), Query Frame = 0
Query:    1 GGGGEGSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLRRLKNNEAVEGR-----RCGGTIITAGNFENAFLRTQPSVSAVDRDFYVSMKDRLGNARAHSS 172
            GGGGEG GV+ERVVNQLLTEMDGLEAR+NVFVVAATNRPELID AMLRPGRLDRLLYVPLPS +DRVSIL+ALSATVSLGPDV+L  +G N KAEGFSGADLAALLREAGLDVLR+LK+ E + G+     +  GT++ A NF+NAFLRTQPSVSA DR FYVSMKDRL  ARAH S
Sbjct:  769 GGGGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATNRPELIDQAMLRPGRLDRLLYVPLPSASDRVSILKALSATVSLGPDVDLHAVGHNPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFDNAFLRTQPSVSATDRAFYVSMKDRLCKARAHPS 945          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: A0A835ZH15_9STRA (Putative ribosome biogenesis ATPase RIX7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH15_9STRA)

HSP 1 Score: 208 bits (529), Expect = 7.780e-60
Identity = 116/175 (66.29%), Postives = 132/175 (75.43%), Query Frame = 0
Query:    2 GGGEGSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLRRLKNNEAVEGRRC----GGTIITAGNFENAFLRTQPSVSAVDRDFYVSMKDRLGNARAHSS 172
            GG  G GVSERVVNQLLTEMDGLE RR+VFVVAATNRPELIDPAMLRPGRLD+LL+VPLP   DRVSILRAL+ + +L  DV+L  +G + KAEG+SGADL+ALLREAG+DVLRRLK  EA EG       G   I   NFE AF RT  SVS  DR  Y++M+ RL  ARAH +
Sbjct:  593 GGDGGGGVSERVVNQLLTEMDGLEERRHVFVVAATNRPELIDPAMLRPGRLDKLLFVPLPGAEDRVSILRALAKSATLSGDVDLAAVGSHPKAEGYSGADLSALLREAGVDVLRRLKAREAAEGVAVYDTPGAVCIGMANFEAAFERTARSVSDRDRRRYLTMQSRLRRARAHDT 767          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: A0A0P0YV27_9STRA (Host cell division cycle protein n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV27_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.220e-59
Identity = 109/176 (61.93%), Postives = 134/176 (76.14%), Query Frame = 0
Query:    4 GEGSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLRR-------LKNNEAVEGRRCGGTIITAGNFENAFLRTQPSVSAVDRDFYVSMKDRLGNARAHSS 172
            G GSGVSERVVNQLLTEMDGLE+RR+VFV+AATNRPELIDPAM+RPGRLD+LLYVPLP+P DRVSIL+A+S  V+LGPDV+L+TIGR+ +A+G+SGAD AALLREAGL VL+          + E  EG       ITA +F+ AF    PSVS  D+  Y  M+DR+ +AR+  +
Sbjct:  229 GGGSGVSERVVNQLLTEMDGLESRRSVFVIAATNRPELIDPAMMRPGRLDKLLYVPLPTPNDRVSILKAISGKVNLGPDVDLDTIGRSARADGYSGADCAALLREAGLAVLKEEMSASANAMDTEEEEGEE-RNICITARHFDYAFDHVVPSVSRKDQARYNRMRDRMAHARSRGA 403          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: A0A7S3DW80_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DW80_9STRA)

HSP 1 Score: 182 bits (461), Expect = 7.060e-54
Identity = 95/167 (56.89%), Postives = 125/167 (74.85%), Query Frame = 0
Query:    6 GSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLRR-LKNNEAVEGRRCGGTIITAGNFENAFLRTQPSVSAVDRDFYVSMKDRLGNARAHS 171
            G GVSERVVNQLLTEMDGL++RR+VFV+AATNRPELIDPAM+RPGRLD+LLYVPLP+P DR+SIL ALSA++ +G DV+++ IG + +A G+SGAD AALLREAGL V++  +  ++  E        I   +F+ AF    PSVS  D+  Y  ++DR+ +AR  +
Sbjct:  102 GGGVSERVVNQLLTEMDGLDSRRSVFVIAATNRPELIDPAMMRPGRLDKLLYVPLPTPEDRISILTALSASIKIGEDVDMQKIGASDRAAGYSGADCAALLREAGLAVIKENVVPDDEEEPETAVELFIHNRHFDEAFKSVMPSVSTKDQRRYDRIRDRMASARTRT 268          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: A0A1Z5JI63_FISSO (Ribosome biogenesis ATPase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI63_FISSO)

HSP 1 Score: 188 bits (478), Expect = 1.250e-52
Identity = 101/171 (59.06%), Postives = 129/171 (75.44%), Query Frame = 0
Query:    3 GGEGSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLRR-LKNNEAVEGRRCGGTIITAGNFENAFLRTQPSVSAVDRDFYVSMKDRLGNARAHSS 172
            GG G GVSERVVNQLLTEMDGL+ RR+VF++AATNRPELIDPAMLRPGRLD+LLYVPLP+P DRVSIL+ALS+ ++L  DV+ E IG + +A G+SGAD AALLREAGL VL+     N++++  R     I+A +F+ AF    PSV+  +   Y  ++DR+ NAR+  S
Sbjct:  630 GGGGGGVSERVVNQLLTEMDGLDGRRSVFIIAATNRPELIDPAMLRPGRLDKLLYVPLPTPEDRVSILKALSSNIALADDVDFEVIGMSTRANGYSGADCAALLREAGLAVLKEDTALNDSLQENR--SLQISARHFDIAFSSVMPSVTRREEARYQRIRDRMSNARSRGS 798          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: A0A7S1GP83_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GP83_CYCTE)

HSP 1 Score: 175 bits (444), Expect = 1.880e-52
Identity = 99/161 (61.49%), Postives = 116/161 (72.05%), Query Frame = 0
Query:    8 GVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLRRLKNNEAVEGRRCGGTIITAGNFENAFLRTQPSVSAVDRDFYVSMKDRLGNAR 168
            GVSERVVNQLLTEMDGLE+RR V V+AATNRPELIDPAMLRPGRLD+LLYVPLPS  DRVSILRALS+ V+L   V+LE IG++ +A G+SGAD AALLREAGL VL+          R      I   + E AF +  PSVS  D+  Y  ++DR+  AR
Sbjct:   26 GVSERVVNQLLTEMDGLESRRTVLVIAATNRPELIDPAMLRPGRLDKLLYVPLPSSGDRVSILRALSSNVTLAESVDLEEIGKSPQANGYSGADCAALLREAGLAVLKESMVRPDTPLR------IDKSHLEYAFQQVLPSVSKRDQARYDRIRDRMARAR 180          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: A0A7S2E712_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E712_TRICV)

HSP 1 Score: 171 bits (433), Expect = 5.120e-52
Identity = 87/110 (79.09%), Postives = 100/110 (90.91%), Query Frame = 0
Query:    6 GSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLR 115
            G GVSERVVNQLLTEMDGL++RR+VFVVAATNRPELIDPAM+RPGRLD+LLYVPLP+ +DRVSILRAL+  V LG DV+L+ IGR+ +AEG+SGAD AALLREAGL VLR
Sbjct:    9 GGGVSERVVNQLLTEMDGLDSRRSVFVVAATNRPELIDPAMMRPGRLDKLLYVPLPTASDRVSILRALAVKVRLGDDVDLDAIGRSSRAEGYSGADCAALLREAGLAVLR 118          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: B8CDA1_THAPS (Nuclear vcp-like-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDA1_THAPS)

HSP 1 Score: 181 bits (459), Expect = 6.800e-51
Identity = 105/171 (61.40%), Postives = 125/171 (73.10%), Query Frame = 0
Query:    3 GGEGSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLR-----RLKN---NEAVEGRRCGGTI-ITAGNFENAFLRTQPSVSAVDRDFYVSMKDRL 164
            GG G GVSERVVNQLLTEMDGL++RR+VFV+AATNRPELIDPAMLRPGRLD+LLYVPLPSP DR+SILRALS  + L PDV+L  I  +  + GFSGAD AALLREAGL VLR     R K+   NE V+ +     + ITA +F  AF    PSVS  D+  Y  +++R+
Sbjct:  435 GGGGGGVSERVVNQLLTEMDGLDSRRSVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPSPTDRLSILRALSTKIKLAPDVDLHAIANDPHSNGFSGADCAALLREAGLAVLRDGVLNRTKDKDGNEVVDKKTEIKLLQITAYHFRYAFDHVLPSVSKKDQARYDRLRERM 605          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: A0A3R6YJE6_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YJE6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.450e-50
Identity = 90/163 (55.21%), Postives = 115/163 (70.55%), Query Frame = 0
Query:    6 GSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLRRLKNNEAVEGRRCGGTIITAGNFENAFLRTQPSVSAVDRDFYVSMKDRLGNAR 168
            G+GVSERVVNQLLTEMDGL+AR+NV V+AATNRP++IDPAMLRPGRLD+LLYVPLP+ +DR  IL+ L+A  SL P ++LE +  + + + FSGADL+AL+REAG+ VLR    +           II A +FE AF    PSVS  D+  +  MK  L  +R
Sbjct:    5 GNGVSERVVNQLLTEMDGLDARKNVVVIAATNRPDIIDPAMLRPGRLDKLLYVPLPTASDRFHILKTLAAKCSLDPTLDLEKVAYDSRCDSFSGADLSALVREAGVSVLRESAEHTTE-------LIILAKHFEQAFQTVFPSVSKADQKIFEKMKQNLRKSR 160          
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Match: A0A7S1KKL8_CYCME (Hypothetical protein n=1 Tax=Cyclotella meneghiniana TaxID=29205 RepID=A0A7S1KKL8_CYCME)

HSP 1 Score: 181 bits (460), Expect = 7.160e-50
Identity = 105/183 (57.38%), Postives = 128/183 (69.95%), Query Frame = 0
Query:    3 GGEGSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPGRLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGADLAALLREAGLDVLR-------RLKNNEAVEGRRCGGTI------ITAGNFENAFLRTQPSVSAVDRDFYVSMKDRLGNARAHSS 172
            GG G GVSERVVNQLLTEMDGL++RR+VFV+AATNRPELIDPAMLRPGRLD+LLYV LP+P DR+SIL+ALS  V+L  DV+LE+I  +  A+GFSGAD AALLREAGL VLR        + NN+    +   G        ITA +F+ AF    PSVS  D+  Y  +++R+  AR   S
Sbjct:  750 GGGGGGVSERVVNQLLTEMDGLDSRRSVFVIAATNRPELIDPAMLRPGRLDKLLYVSLPTPKDRLSILQALSKKVNLAADVDLESIANDPHADGFSGADCAALLREAGLAVLRDGVLDRASIGNNDVSGSKDTEGEHKQLQLQITAHHFKYAFDHVLPSVSKKDQARYDRLRERMARARTRGS 932          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6223.17071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQZ0_ECTSI1.170e-7978.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZH15_9STRA7.780e-6066.29Putative ribosome biogenesis ATPase RIX7 n=1 Tax=T... [more]
A0A0P0YV27_9STRA1.220e-5961.93Host cell division cycle protein n=1 Tax=Nitzschia... [more]
A0A7S3DW80_9STRA7.060e-5456.89Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5JI63_FISSO1.250e-5259.06Ribosome biogenesis ATPase n=2 Tax=Fistulifera sol... [more]
A0A7S1GP83_CYCTE1.880e-5261.49Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2E712_TRICV5.120e-5279.09Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
B8CDA1_THAPS6.800e-5161.40Nuclear vcp-like-like protein (Fragment) n=1 Tax=T... [more]
A0A3R6YJE6_9STRA1.450e-5055.21Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A7S1KKL8_CYCME7.160e-5057.38Hypothetical protein n=1 Tax=Cyclotella meneghinia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.60coord: 62..166
e-value: 6.5E-18
score: 66.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1..61
e-value: 3.0E-19
score: 71.5
NoneNo IPR availablePANTHERPTHR23077AAA-FAMILY ATPASEcoord: 4..164
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 5..59
e-value: 2.6E-13
score: 50.6
IPR041569AAA ATPase, AAA+ lid domainPFAMPF17862AAA_lid_3coord: 82..117
e-value: 1.5E-9
score: 37.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6223contigF-serratus_M_contig6223:15561..22005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6223.17071.1mRNA_F-serratus_M_contig6223.17071.1Fucus serratus malemRNAF-serratus_M_contig6223 15561..22005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6223.17071.1 ID=prot_F-serratus_M_contig6223.17071.1|Name=mRNA_F-serratus_M_contig6223.17071.1|organism=Fucus serratus male|type=polypeptide|length=172bp
GGGGEGSGVSERVVNQLLTEMDGLEARRNVFVVAATNRPELIDPAMLRPG
RLDRLLYVPLPSPADRVSILRALSATVSLGPDVNLETIGRNCKAEGFSGA
DLAALLREAGLDVLRRLKNNEAVEGRRCGGTIITAGNFENAFLRTQPSVS
AVDRDFYVSMKDRLGNARAHSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR041569AAA_lid_3
IPR027417P-loop_NTPase