prot_F-serratus_M_contig6186.16981.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6186.16981.1
Unique Nameprot_F-serratus_M_contig6186.16981.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length143
Homology
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: D7FUT0_ECTSI (Methionine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT0_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 5.290e-74
Identity = 118/142 (83.10%), Postives = 127/142 (89.44%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ QAL DRFVEA AE+LH D+RK+IWGYA +EK    DLFKLKYQGIRPAPGYPSQPDHTEK+TMWD+L   ELTGI LSESLSMMPASSVSALVFAHPDSEYFAVGTI KDQVSSYAERKGMDLE CEKWLSPIL+YDRD
Sbjct: 1083 IMVQALTDRFVEAFAEKLHEDMRKDIWGYAPDEKVEGQDLFKLKYQGIRPAPGYPSQPDHTEKRTMWDLLNAAELTGIELSESLSMMPASSVSALVFAHPDSEYFAVGTIAKDQVSSYAERKGMDLETCEKWLSPILSYDRD 1224          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: A0A448YVT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVT1_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.340e-69
Identity = 107/142 (75.35%), Postives = 123/142 (86.62%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ QALADRFVEA AE LH +IR ++WGYA +E+    DL K+KY GIRPAPGYPSQPDHTEK TMWD++KV++  GI LS+SLSMMPASSVSALVFAHP SEYFAVG IGKDQV+SYAERK MDLE+CE+WLSPILNYDRD
Sbjct:  528 IMAQALADRFVEAFAEFLHREIRIDLWGYAKDEQLDESDLLKVKYDGIRPAPGYPSQPDHTEKSTMWDIVKVKDSAGIELSDSLSMMPASSVSALVFAHPQSEYFAVGQIGKDQVTSYAERKKMDLELCERWLSPILNYDRD 669          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: A0A836CPG7_9STRA (Methionine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG7_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.430e-69
Identity = 112/140 (80.00%), Postives = 124/140 (88.57%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYD 140
            ++ QALADR VEA AE LHAD+R+EIWG+ASEEK +  DLFKLKYQGIRPAPGYPSQPDHTEK+TMW+VLK EEL GI+LSESLSMMPASSVSALVFAHP SEYFAVG IGKDQV SYA RKGM L+ C++WL PILNYD
Sbjct: 1142 IMVQALADRLVEAFAEALHADVRREIWGFASEEKVAGEDLFKLKYQGIRPAPGYPSQPDHTEKRTMWNVLKAEELAGIQLSESLSMMPASSVSALVFAHPQSEYFAVGKIGKDQVESYAARKGMPLDECQRWLGPILNYD 1281          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: A0A7S0ADJ9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ADJ9_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.830e-69
Identity = 101/142 (71.13%), Postives = 117/142 (82.39%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ QALADRFVEA AE LH +IR ++WGYA  EK    DL K+KY GIRPAPGYPSQPDHTEK++MWD +K EEL GI LSESLSMMPA+SVSALVFAHP S+YFAVG I KDQV SYA+RK  +LE  E+WLSPIL+Y+RD
Sbjct:   35 IMSQALADRFVEAFAEYLHREIRVDMWGYAKNEKLDEADLLKIKYDGIRPAPGYPSQPDHTEKRSMWDTIKAEELAGIELSESLSMMPAASVSALVFAHPQSQYFAVGQICKDQVESYAQRKQFELEKMERWLSPILSYERD 176          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: K0TIK6_THAOC (AdoMet activation domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIK6_THAOC)

HSP 1 Score: 217 bits (553), Expect = 4.470e-69
Identity = 102/142 (71.83%), Postives = 116/142 (81.69%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ QALADRFVEA AE LH  IR ++WGYA +E     DL K+KY GIRPAPGYPSQPDHTEK TMW  ++ +EL GI LSESLSMMPA+SVSALVFAHP S+YFAVG IGKDQV SYA RK MDL +CE+WLSPILNY+RD
Sbjct:  106 IMSQALADRFVEAFAEYLHRVIRTDMWGYAKDESLDNEDLLKIKYVGIRPAPGYPSQPDHTEKSTMWSAIQAKELAGIELSESLSMMPAASVSALVFAHPQSQYFAVGQIGKDQVESYASRKKMDLPICERWLSPILNYERD 247          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: A0A7S3PCY8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PCY8_9STRA)

HSP 1 Score: 225 bits (574), Expect = 7.210e-69
Identity = 105/142 (73.94%), Postives = 121/142 (85.21%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ QALADRFVEA AE LH +IR  +WGYA+ E+ +  DL K+KY GIRPAPGYPSQPDHTEK TMW+ +K +EL GI LSESLSMMPA+SVSALVFAHP SEYFAVG IGKDQV+SYA RK MDLE+CE+WLSPILNY+RD
Sbjct:  392 IMAQALADRFVEAFAEYLHREIRVNLWGYAAGEQLNEADLLKIKYDGIRPAPGYPSQPDHTEKTTMWNTIKAQELAGIELSESLSMMPAASVSALVFAHPQSEYFAVGQIGKDQVTSYAARKKMDLEVCERWLSPILNYERD 533          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: A0A088GF04_9STRA (Methionine synthase (Fragment) n=1 Tax=Pseudo-nitzschia granii TaxID=476440 RepID=A0A088GF04_9STRA)

HSP 1 Score: 231 bits (589), Expect = 6.650e-68
Identity = 108/142 (76.06%), Postives = 121/142 (85.21%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ QALADRFVEA AE LH +IR ++WGYA +E     DL K+KY GIRPAPGYPSQPDHTEK TMWD++KV+E  GI LSESLSMMPA+SVSALVFAHPDSEYFAVG +GKDQV SYAERK MDLE CE+WLSPILNYDRD
Sbjct:  943 IMAQALADRFVEAFAEYLHREIRLDLWGYAKDECLDEADLLKIKYDGIRPAPGYPSQPDHTEKATMWDIVKVQESAGIELSESLSMMPAASVSALVFAHPDSEYFAVGQVGKDQVVSYAERKKMDLEKCERWLSPILNYDRD 1084          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: A0A7S4DBJ3_HETAK (Methionine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBJ3_HETAK)

HSP 1 Score: 229 bits (585), Expect = 3.980e-67
Identity = 108/142 (76.06%), Postives = 123/142 (86.62%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ QALADR VEA AE+LH DIR  +WGYA +E+    DL K++YQGIRPAPGYPSQPDHTEK+TMWD+LKVEEL+GIRLSESLSMMPASSVSALVFAHPD++YFAVG IG+DQV  YA RKGMD+   EKWLSPILNYDRD
Sbjct: 1145 IMVQALADRLVEAFAEKLHRDIRTALWGYAPDEELPAEDLHKIRYQGIRPAPGYPSQPDHTEKRTMWDLLKVEELSGIRLSESLSMMPASSVSALVFAHPDAQYFAVGKIGRDQVQEYAARKGMDVPEMEKWLSPILNYDRD 1286          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: A0A8J9X531_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X531_PHATR)

HSP 1 Score: 222 bits (566), Expect = 6.030e-67
Identity = 101/142 (71.13%), Postives = 124/142 (87.32%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ QALADRFVEA AE +H ++R ++WGYA+ E+ +  DL K+KY GIRPAPGYPSQPDHTEK+TMW++L+ +EL GI LSESLSMMPASSVSALVFAHP+SEYFAVG +GKDQV++YA RK MDL +CE+WLSPILNY+RD
Sbjct:  474 IMAQALADRFVEAFAEYVHREMRLDLWGYAAGEQLNESDLLKVKYDGIRPAPGYPSQPDHTEKRTMWNLLQAQELAGIELSESLSMMPASSVSALVFAHPESEYFAVGQVGKDQVTNYASRKQMDLALCERWLSPILNYERD 615          
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Match: A0A088GJ40_9STRA (Methionine synthase n=1 Tax=Fragilariopsis kerguelensis TaxID=186038 RepID=A0A088GJ40_9STRA)

HSP 1 Score: 229 bits (583), Expect = 7.820e-67
Identity = 107/142 (75.35%), Postives = 120/142 (84.51%), Query Frame = 0
Query:    1 VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRPAPGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHPDSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD 142
            ++ Q+LADRFVEA AE LH +IR +IWGYA  E     DL K+KY GIRPAPGYPSQPDHTEK TMWD++KV+E  GI LSESLSMMPA+SVSALVFAHP SEYFAVG IGKDQV SYAERK MD+E+CE+WLSPILNYDRD
Sbjct: 1219 IMAQSLADRFVEAFAEYLHREIRIDIWGYAKGESLDEADLLKIKYDGIRPAPGYPSQPDHTEKATMWDIVKVQEHAGIELSESLSMMPAASVSALVFAHPQSEYFAVGQIGKDQVDSYAERKKMDIELCERWLSPILNYDRD 1360          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6186.16981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUT0_ECTSI5.290e-7483.10Methionine synthase n=1 Tax=Ectocarpus siliculosus... [more]
A0A448YVT1_9STRA1.340e-6975.35Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A836CPG7_9STRA1.430e-6980.00Methionine synthase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S0ADJ9_9STRA1.830e-6971.13Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
K0TIK6_THAOC4.470e-6971.83AdoMet activation domain-containing protein n=1 Ta... [more]
A0A7S3PCY8_9STRA7.210e-6973.94Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A088GF04_9STRA6.650e-6876.06Methionine synthase (Fragment) n=1 Tax=Pseudo-nitz... [more]
A0A7S4DBJ3_HETAK3.980e-6776.06Methionine synthase n=1 Tax=Heterosigma akashiwo T... [more]
A0A8J9X531_PHATR6.030e-6771.13Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
A0A088GJ40_9STRA7.820e-6775.35Methionine synthase n=1 Tax=Fragilariopsis kerguel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037010Vitamin B12-dependent methionine synthase, activation domain superfamilyGENE3D3.10.196.10coord: 1..142
e-value: 9.3E-63
score: 213.8
IPR037010Vitamin B12-dependent methionine synthase, activation domain superfamilySUPERFAMILY56507Methionine synthase activation domain-likecoord: 3..141
IPR004223Vitamin B12-dependent methionine synthase, activation domainPFAMPF02965Met_synt_B12coord: 3..123
e-value: 2.9E-55
score: 187.7
IPR004223Vitamin B12-dependent methionine synthase, activation domainPROSITEPS50974ADOMET_ACTIVATIONcoord: 1..142
score: 53.45
NoneNo IPR availablePANTHERPTHR11103:SF11coord: 3..142
NoneNo IPR availablePANTHERPTHR11103FAMILY NOT NAMEDcoord: 3..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6186contigF-serratus_M_contig6186:7202..8373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6186.16981.1mRNA_F-serratus_M_contig6186.16981.1Fucus serratus malemRNAF-serratus_M_contig6186 7202..8373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6186.16981.1 ID=prot_F-serratus_M_contig6186.16981.1|Name=mRNA_F-serratus_M_contig6186.16981.1|organism=Fucus serratus male|type=polypeptide|length=143bp
VVPQALADRFVEALAERLHADIRKEIWGYASEEKASPLDLFKLKYQGIRP
APGYPSQPDHTEKQTMWDVLKVEELTGIRLSESLSMMPASSVSALVFAHP
DSEYFAVGTIGKDQVSSYAERKGMDLEMCEKWLSPILNYDRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037010VitB12-dep_Met_synth_activ_sf
IPR004223VitB12-dep_Met_synth_activ_dom