prot_F-serratus_M_contig6179.16975.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6179.16975.1
Unique Nameprot_F-serratus_M_contig6179.16975.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length366
Homology
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: D8LCS6_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCS6_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 4.720e-132
Identity = 249/372 (66.94%), Postives = 277/372 (74.46%), Query Frame = 0
Query:    1 VDSWVDFATTFSAEHVAGVDRHLSGRSFLAGGAFSLADVAVYFACAGAVATADASFSKKTLNFSRWFNHVQHRVNNMAPSCKALPAVVTLDLFTPVPVXLPPK-PAVVTDAEGKSKAGSPETDRTPTVANG-GDEPSANSH-----KKXXXXXXXXXXXXXXXXXXXXXXXAAGAGGADGVDGAKAXXXXXXXXXXXXXXXXXXXXXGDPSKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNPCVATIPEAHVS 365
            VDSW+DF+T+FS+EH+A +++HL GRSFLAGGAFSLADVAVYFACA AVA A  +  K+ L+  RWFN VQHRV  +APSC  LP  VTL++F+PV V LP K PA  + A                   G G E SA++      KKXXXXXXXXXXXXXXX        AA A GA G     AXXXXXXXXX            GDPSKLDVRVG IVKAWEHPDS+KLFCEEIDLGEG NRNIASGLR FY+LEEMQGRRVIVLANLK RNIGGFKS GMVLCASS DHSVVK++EPPP AA+GAR TVSGTEGEPATPAQ+ KKKILEKC PKL+TNS+G+ GY+GVGVFNVDG PCVATIP A VS
Sbjct:   19 VDSWLDFSTSFSSEHLASLNKHLPGRSFLAGGAFSLADVAVYFACAAAVAAAPPAAGKQ-LHLCRWFNQVQHRVRLLAPSCPVLPPTVTLNIFSPVAVPLPAKQPATSSGAAQXXXXXXXXXXXXXXXXCGVGTEKSASASSPTEGKKXXXXXXXXXXXXXXXGDGKAATPAAAAKGAPGEAKKGAXXXXXXXXXAAE---------GDPSKLDVRVGTIVKAWEHPDSEKLFCEEIDLGEGANRNIASGLRAFYTLEEMQGRRVIVLANLKPRNIGGFKSNGMVLCASSEDHSVVKIVEPPPGAAIGARVTVSGTEGEPATPAQVQKKKILEKCAPKLKTNSDGLPGYDGVGVFNVDGEPCVATIPGAFVS 380          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A835ZED8_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED8_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.430e-63
Identity = 169/386 (43.78%), Postives = 210/386 (54.40%), Query Frame = 0
Query:    1 VDSWVDFATTFS-AEHVAGVDRHLSGRSFLAGGAFSLADVAVYFACAGAVATADASFSKKTLNFSRWFNHVQHRVNNMAPSCKALPAVVTLDLFTPVPVXLPP-KPAVVTDAEGKSKAGSPETDRTPTVANG-------------------GDEPSANSHKKXXXXXXXXXXXXXXXXXXXXXXXAAGAGGADGVDGAKAXXXXXXXXXXXXXXXXXXXXXGDPSKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNPCVATIPEAHVS 365
            +DSW+D   +   + H A +D HLS RS+L G   +LAD AVY      +A A      K  N  RW  H Q  +++    C  L  V       PV + +P  KPA        +KA   +       AN                    G+E        XXXXXXXXXXXXXXXXXXXXXX  A  G A G D A                        DP+KLD+RVGVI K W+HPDS+KL+CEEID+GE K R IASGL+ FY+LEEM+ RRV+VLANLK R + GFKSEGMVLCAS+ADH+VVK + PP  A  GA  T  G  GEPATPAQ+ KKKI+EK +P ++T+  GV G++G      D   C + +P A V+
Sbjct:   54 IDSWLDIVASGPISAHTASLDDHLSLRSYLVGPGLTLADAAVY------IAIAQGQLDSKHTNVLRWALHCQCLISSACNECPPL-QVTASPPREPVTLPVPKGKPAAAAGGATGAKAAPADQKAKSDAANDAGXXXXXXXXXXXXXXXXXGEEDGKGKKGXXXXXXXXXXXXXXXXXXXXXXXAPATDGAATGSDEA------------------------DPTKLDIRVGVITKVWKHPDSEKLYCEEIDVGEDKPRQIASGLQAFYALEEMENRRVLVLANLKPRPLAGFKSEGMVLCASNADHTVVKFVNPPEGAPAGACITFPGRAGEPATPAQIQKKKIMEKVMPLMKTDDAGVPGFDGCPFTVEDFGACSSEVPGAAVA 408          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A7S2CUQ5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUQ5_9STRA)

HSP 1 Score: 178 bits (451), Expect = 9.270e-51
Identity = 92/164 (56.10%), Postives = 118/164 (71.95%), Query Frame = 0
Query:  204 SKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLE-EMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNPCVATIPEA-HVS 365
            +KL++ VG+I KAW+HPDSDKL+CEEID+G  K R IASGLR FY  E +++GR+V+VLANLK + +GGF SEGMVLCAS+  H VVK +E P  A +G R    G EGEPATPAQ+ KKK+LE+ +P L TN+EGV  Y+G   F +    C A + E  HV+
Sbjct:   57 TKLNMVVGLIKKAWKHPDSDKLWCEEIDIGGEKPRQIASGLRKFYENESDLEGRKVLVLANLKAKKLGGFPSEGMVLCASNEAHDVVKFVEVPADAVIGERVHFEGLEGEPATPAQIGKKKVLEEVLPLLVTNAEGVCTYKGEKAFLLSNGQCTAPVGEGFHVA 220          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A7S2S818_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S818_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.550e-50
Identity = 90/161 (55.90%), Postives = 115/161 (71.43%), Query Frame = 0
Query:  204 SKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNP-CVATIPEAH 363
            +KLD+RVG IV+AWEHPDS+KLFCE ID G G+ RNIASGLR FY LE++Q R V+V+ NLK R +GGFKSEGMVLCAS   HS V  ++PP  A +G + T  G +  P +PAQ+ KKK+LE C P LR  S+G A Y+G+  F V+G   C A++ E +
Sbjct:   75 AKLDIRVGRIVEAWEHPDSEKLFCERIDFGGGEVRNIASGLRAFYKLEDLQDRLVVVMYNLKARPLGGFKSEGMVLCASDEAHSHVVFLDPPAGAEIGEQVTFPGIQTNPVSPAQVQKKKVLEACFPHLRIGSDGKAEYKGIP-FTVEGRGVCTASVAEGY 234          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A7S2U7D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7D6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 6.160e-50
Identity = 88/156 (56.41%), Postives = 114/156 (73.08%), Query Frame = 0
Query:  202 DPSKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNPCVA 357
            D SKLD+RVGVI KAWEH ++DKLFCEEID+GE + R IASGLR +Y +E++ G+RV+VLANLKTR + GF S GMV+CAS+ D S+V+ +EPP  A +G R  V G +GEPA+  Q+ KKK+L    P L+TN++GV  Y+ V  F     PCVA
Sbjct:   87 DVSKLDIRVGVITKAWEHEEADKLFCEEIDIGEAEPRQIASGLRAYYKVEDLSGQRVLVLANLKTRKLMGFPSHGMVMCASNEDGSMVEFVEPPVDAKIGERIMVEGYDGEPASENQVIKKKMLNDIFPDLKTNADGVVTYKAVP-FLTSAGPCVA 241          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A7S2JU11_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JU11_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.840e-49
Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 0
Query:  202 DPSKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNPCVA 357
            D SKLD+RVGVI KAWEH ++DKLFCEEID+GE + R IASGLR  Y ++++ G+RV+VL+NLKTR + GF S GMV+CA+SAD + V+ +EPP  AAVG R  + G  GEPAT  Q+ KKK+LEK  P L TN  GVA Y+GV  F      CVA
Sbjct:  113 DVSKLDIRVGVITKAWEHEEADKLFCEEIDIGEDEPRQIASGLRAHYKVDDLVGQRVLVLSNLKTRKLVGFPSHGMVMCAASADGTKVEFVEPPAGAAVGERVMIEGYGGEPATENQIIKKKMLEKIFPDLSTNEAGVATYKGVP-FATSTGECVA 267          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A7S3LYU7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYU7_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.110e-49
Identity = 144/369 (39.02%), Postives = 199/369 (53.93%), Query Frame = 0
Query:    1 VDSWVDFATTFSAE-HVAGVDRHLSGRSFLAGGAFSLADVAVYFACAGAVATADASFSKKTLNFSRWFNHVQHRVNNMAPSCKALPAVVTLDLFTPVPVXLPPKPAVVTDAEGKSKAGSPETDRTPTVANGGDEPSANSHKKXXXXXXXXXXXXXXXXXXXXXXXAAGAGGADGVDGAKAXXXXXXXXXXXXXXXXXXXXXGDPSKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSG--TEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNPCVAT-IPEAHVS 365
            VD W+ F++    + H+  ++  L  ++FL G + SLAD +V+      VATA+   SK + N  RWF HVQ          K +P +    +F+  P  +P  P++  D    SK   PE+  TP  +     P++ +                           A        +G     XXXXXXXXXXX         DP+KL++R GV++K W HPDS+KL CEEID+G G  R IASG+R FY+ E++ G++V+VL NLK R+IGGFKS+GMVLCA SADHSV++++E P +AA G R T      +   ATPAQM KKKILE   P LRT+S GVA +     F +  + C A  + +A VS
Sbjct:   52 VDMWLRFSSQEIVDAHLIALNEILLLKTFLVGNSISLADYSVF------VATANLDLSKFS-NVVRWFKHVQS-------VSKPVPEINVCSVFSFAPTFIP-VPSMDGDV---SKV--PESAATPAAS----APASTA-------------------------AVAVPDNKKAKEGKAKDTXXXXXXXXXXXATEDTSSALDPTKLEIRCGVVLKCWNHPDSEKLLCEEIDMGNGDVRQIASGIRAFYAAEQLVGKKVVVLCNLKERSIGGFKSQGMVLCAVSADHSVIRLLEAPASAAAGDRVTFPPFPADSVAATPAQMVKKKILEGLAPGLRTDSAGVAHWND-SPFTIGADVCAAPGVADAVVS 370          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A7S0Y8C2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8C2_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.340e-48
Identity = 87/144 (60.42%), Postives = 106/144 (73.61%), Query Frame = 0
Query:  202 DPSKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSG-TEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEG 344
            D S LD+RVG IVKAW HP+S+KLFCEEIDLGE   R IASGLR FY  EE++GRRV+VL NLK R + GF S GMVLCAS+ADH+ V+ +EPP  AA+G R    G TEGEP    ++AKKKI EK  P L+T++ GV  ++G
Sbjct:   41 DVSALDIRVGKIVKAWHHPESEKLFCEEIDLGEDAPRQIASGLRAFYKTEELEGRRVVVLCNLKARKLVGFPSHGMVLCASNADHTAVECMEPPEDAAIGTRIVFEGFTEGEPEPENKIAKKKIFEKLAPDLKTDANGVCIWKG 184          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A7S3LIF5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LIF5_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.560e-48
Identity = 93/164 (56.71%), Postives = 120/164 (73.17%), Query Frame = 0
Query:  202 DPSKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNPCVATIPEAHVS 365
            D SKLD+RVGVI KAW H ++DKLFCEEID+GE   R IASGLR  Y+LE+++G+RV+VLANLK R + GF S GMV+CAS++D SV K +EPP  A +G R  V G +GEPAT  Q+ KKK+LE+  P L+TN+ G+A Y+GV +    G PC  T+P A V+
Sbjct:  368 DVSKLDIRVGVITKAWLHEEADKLFCEEIDIGEDSPRQIASGLRAHYNLEDLEGQRVLVLANLKARKLVGFPSHGMVMCASNSDGSV-KFVEPPADAKIGERVMVEGYDGEPATENQVIKKKMLEQIFPDLKTNAAGIACYKGVPLTTTAG-PCQPTLPNADVA 529          
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Match: A0A7R9ZR76_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZR76_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.710e-48
Identity = 91/164 (55.49%), Postives = 112/164 (68.29%), Query Frame = 0
Query:  204 SKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSLEEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAVGARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNVDGNPCVAT--IPEAHVS 365
            S LD+RVG IVKAWEHP+SDKLFCEE+DLGE   R IASGLR FY  E+++ RRV+VL NLK RN+ GF S GMVLCAS+ADH+ V+ +EPP  A VG R T +G +G P    ++AKKKI E   P L+TN EG+  ++   V    G P  A   +P A VS
Sbjct:   49 SALDIRVGKIVKAWEHPESDKLFCEEVDLGEDAPRQIASGLRAFYKKEDLENRRVVVLCNLKKRNLVGFPSHGMVLCASNADHTAVQFMEPPADAKVGERVTFAGFDGNPEPENKVAKKKIFEGLAPFLKTNDEGICVWKEA-VSQTSGGPIKAAKGMPGAQVS 211          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6179.16975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS6_ECTSI4.720e-13266.94tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A835ZED8_9STRA3.430e-6343.78tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S2CUQ5_9STRA9.270e-5156.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S818_9STRA1.550e-5055.90Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2U7D6_9STRA6.160e-5056.41Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2JU11_9STRA3.840e-4958.33Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3LYU7_9STRA4.110e-4939.02Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0Y8C2_9STRA1.340e-4860.42Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S3LIF5_9STRA1.560e-4856.71Phenylalanine--tRNA ligase n=1 Tax=Amphora coffeif... [more]
A0A7R9ZR76_9STRA1.710e-4855.49Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004046Glutathione S-transferase, C-terminalPFAMPF00043GST_Ccoord: 16..72
e-value: 4.1E-5
score: 23.7
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 208..302
e-value: 1.0E-26
score: 92.9
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 202..305
score: 30.288
NoneNo IPR availableGENE3D1.20.1050.130coord: 1..83
e-value: 3.5E-14
score: 54.9
NoneNo IPR availableGENE3D2.40.50.140coord: 198..365
e-value: 1.4E-47
score: 163.6
NoneNo IPR availablePANTHERPTHR11586:SF39NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEINcoord: 135..365
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 135..365
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 202..361
IPR036282Glutathione S-transferase, C-terminal domain superfamilySUPERFAMILY47616GST C-terminal domain-likecoord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6179contigF-serratus_M_contig6179:22676..25571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6179.16975.1mRNA_F-serratus_M_contig6179.16975.1Fucus serratus malemRNAF-serratus_M_contig6179 22676..25571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6179.16975.1 ID=prot_F-serratus_M_contig6179.16975.1|Name=mRNA_F-serratus_M_contig6179.16975.1|organism=Fucus serratus male|type=polypeptide|length=366bp
VDSWVDFATTFSAEHVAGVDRHLSGRSFLAGGAFSLADVAVYFACAGAVA
TADASFSKKTLNFSRWFNHVQHRVNNMAPSCKALPAVVTLDLFTPVPVPL
PPKPAVVTDAEGKSKAGSPETDRTPTVANGGDEPSANSHKKDKKKDKKKK
KEGGDNATGEAPPPAAGAGGADGVDGAKAGVGGSSAAEAQASSAEPAAAQ
GDPSKLDVRVGVIVKAWEHPDSDKLFCEEIDLGEGKNRNIASGLRTFYSL
EEMQGRRVIVLANLKTRNIGGFKSEGMVLCASSADHSVVKVIEPPPTAAV
GARATVSGTEGEPATPAQMAKKKILEKCVPKLRTNSEGVAGYEGVGVFNV
DGNPCVATIPEAHVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004046GST_C
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold
IPR036282Glutathione-S-Trfase_C_sf