prot_F-serratus_M_contig615.16931.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig615.16931.1
Unique Nameprot_F-serratus_M_contig615.16931.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length127
Homology
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BLAST of mRNA_F-serratus_M_contig615.16931.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 6.920e-7
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:   67 NIRDPLTEVGVTPTCLRRLQLLSGGWARLCP 97
            +IRDP TEVGVTP CLRRLQLLSGGW R+ P
Sbjct:   18 SIRDPFTEVGVTPRCLRRLQLLSGGWVRVYP 48
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig615.16931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLK3_ECTSI6.920e-780.65AAA ATPase domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig615contigF-serratus_M_contig615:254814..265377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig615.16931.1mRNA_F-serratus_M_contig615.16931.1Fucus serratus malemRNAF-serratus_M_contig615 254814..265377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig615.16931.1 ID=prot_F-serratus_M_contig615.16931.1|Name=mRNA_F-serratus_M_contig615.16931.1|organism=Fucus serratus male|type=polypeptide|length=127bp
MRLSPLVCSVQRAGIILGTPPSATKLRVRCTTAPLSPGCSAIAPSFRAPL
AGDIRSRRHPRSEDAENIRDPLTEVGVTPTCLRRLQLLSGGWARLCPPSK
MSTVHRGLPYPHDSDENIDADKAVAAA
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