prot_F-serratus_M_contig6147.16916.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6147.16916.1
Unique Nameprot_F-serratus_M_contig6147.16916.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length569
Homology
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: D7FWN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN9_ECTSI)

HSP 1 Score: 701 bits (1809), Expect = 5.120e-247
Identity = 430/542 (79.34%), Postives = 469/542 (86.53%), Query Frame = 0
Query:    2 VEQPYQGRSVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKPAAPAKPAESGTKEGEEDGA-----------AGEEDGEKKTAAPASLTRKAVMAPIAKAARALDKTTPPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDEELTVVTDYQPGVATG-ASAGPIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLGSLARKRGDIFGSAEDEEKQLLAESNARKKRKEDVTRVMWDGNIATADAARQAALAKQIAAPRTATRTGPISNIGPQIPGRG 531
            VEQPYQG+ VKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASE+GKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAP+ AAPA  A                       AG+ D   K AAPAS++RKAVMAPIAKA ++L+K T PR FEFSVGHPTGL+ALDVDLIKLTAQFTAVGGRNFL+ELA+REA+NEQFQFLKHTHALFSYFTSLVDAYTKVLQPTA Q+ YVESGRDRQ TLERCVHRW+F+REK+AKK+A+LAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIA+DG+ELPP XXXXX           KPNLLPEA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +HGED+++ VVTDY+PGVATG A+A P MV DP+TG  +AAS+LSDHMRIQL+DPKW+E+QARAAAKQKDTALA+GES+A SL SLARKRGDIFGSAEDEE+QLL ESNARKKRKE+VTRV+WDGNIATA AARQAAL KQI  PRTA RTGPISNIGPQ+ GRG
Sbjct:   48 VEQPYQGK-VKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPR-AAPATAAXXXXXXXXXXXXXXXXXXXXXXXAGKSD---KKAAPASVSRKAVMAPIAKAVKSLNKATEPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIAEDGIELPPPXXXXXEVDLAP----IKPNLLPEAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----QHGEDDDIHVVTDYKPGVATGSATALPTMVIDPITGATVAASELSDHMRIQLMDPKWREEQARAAAKQKDTALAEGESIAASLKSLARKRGDIFGSAEDEEQQLLNESNARKKRKEEVTRVLWDGNIATATAARQAALQKQINTPRTAQRTGPISNIGPQVSGRG 576          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: A0A4D9CLT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLT9_9STRA)

HSP 1 Score: 356 bits (913), Expect = 1.520e-110
Identity = 216/500 (43.20%), Postives = 307/500 (61.40%), Query Frame = 0
Query:    7 QGRS--VKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDFEEN-GDAP-----KPAAPAKPAESGTKEGEEDGAAGEEDGEKKTAAPASLTRKAVMAPIAKAARALDKTTPPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDE------ELTVVTDYQPGVATGASAG-PIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLGSLARKRGDIFGSAEDEEKQLLAESNARKKRKEDVTRVMWDG 491
            QGRS  V GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SE+GKS+KFNFM+P DPY AYYE +IR FEE  G+ P     K A  + PA   T++G+     G+       A   ++++ +V+ PIAKAA    +  PP P EF + HP GL+ LDV++IKLTAQ+TA  GR FL+ LA+RE +N  F+FLK +H LFSYFT+LVDAY KVLQPT AQ+  V+ G + Q  LER VHRW  E++ + +K+   A  +A+R+A++S+DWHDFVVVETI F +DEL++           V +P               EM++                                              + GE++      E+ VV+ Y+P VA G  A  P ++ DPVTG+++  +D+ +HMRIQ LDP+W+++Q RA  K+K++ALA+G  +A ++ S A+KR DIFG++E+EE+Q+LA+    + R+E+  R++W G
Sbjct:   27 QGRSGKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRRFEEGKGEGPAEKKAKIAEASPPAAGETRDGKAVADTGKTPTAVSAAPTTTVSKASVLGPIAKAALHKPEAPPP-PQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLETQKVLERAVHRWVHEKDDEQRKKHQQAEQEAERVAYQSVDWHDFVVVETITFAEDELLD-----------VGMPEVGGGRAN------GEMSEDE------------------------------------GEDMEGPGQEGEEDMDLDEGEIKVVSSYKPRVAAGGGAARPEVMLDPVTGKEVPIADVGEHMRIQFLDPRWRDEQRRALEKRKESALAEGGDIAANVRSFAKKRTDIFGTSEEEERQILADQERFRARQEENQRMIWQG 472          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: A0A836C863_9STRA (Surp module-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C863_9STRA)

HSP 1 Score: 321 bits (823), Expect = 1.110e-101
Identity = 185/303 (61.06%), Postives = 213/303 (70.30%), Query Frame = 0
Query:    2 VEQPYQGRSVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKPAAPAKPAESGTKEGEEDGAAGEEDGEKKTAAPASLTRKAVMAPIAKAARALDKTTPPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYF-------------------TSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDEL 285
            VE   QG+ VKGII PPP+IRAI DKTARFVAKNGKSFE+RI  SE+G+SAKFNFMRPHDPYYAYYE+KIR+ EE  D P   APA P            A GE     K  A A++ +KAVMAPIAKAAR + K   P PF FS GHPTGL+A D+DLIKLTAQ+TA GGR FL+ LAR+EA+NE FQFLK  HALFSYF                   TSLVDAYTKVLQPT  QK   ++G  RQ  LER VHRW+++R +Q K+ A  A  DAD++AFRSIDW DFVVVETI+FP+DEL
Sbjct:   33 VEAASQGK-VKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPA-GAPAAPXXXXXXXXXXX-ADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL 332          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: W7TP71_9STRA (SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP71_9STRA)

HSP 1 Score: 333 bits (853), Expect = 4.820e-101
Identity = 246/494 (49.80%), Postives = 327/494 (66.19%), Query Frame = 0
Query:    7 QGRS--VKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDFEEN-GDAP-----KPAAPAKPAESGTKEGEEDGAAGEEDGEKKTAAPASLTRKAVMAPIAKAARALDKTTPPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDEELTVVTDYQPGVATGASAG-PIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLGSLARKRGDIFGSAEDEEKQLLAESNARKKRKEDVTRVMWDG 491
            QGRS  V GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SE+GKS+KFNFM+P DPY AYYE +IR FEE  G+ P     K A  + PA   T++G+     GE       A   ++++ +V+ PIAKAA    +  PP P EF + HP GL+ LDV++IKLTAQ+TA  GR FL+ LA+RE +N  F+FLK +H LFSYFT+LVDAY KVLQPT +Q+  V  G + Q  LER VHR                     R+A++S+DWHDFVVVETI F +DEL++           V +P               E+++       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXX   E E + VV+ Y+P VA G  A  P ++ DPVTG+++  +D+ +HMRIQ LDP+W+++Q RA  K+K++ALA+G  +A ++ S A+KR DIFG++E+EE+Q+LA+    + R+E+  R++W G
Sbjct:   27 QGRSGKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEGPAEKKAKIAEVSPPAAGETRDGKAVADTGETPTAVSAAPTTTVSKASVLGPIAKAALHKPEAPPP-PQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDSQRAMVRQGLETQKVLERAVHRXXXXXXXXXXXXXXXXXXXXXRVAYQSVDWHDFVVVETITFAEDELLD-----------VGMPEVGGGRAN------GEVSEDEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPXXXXXXXXDLDEGE-IKVVSSYKPRVAAGGGAARPEVMLDPVTGKEVPIADVGEHMRIQFLDPRWRDEQRRALEKRKESALAEGGDIAANVRSFAKKRTDIFGTSEEEERQILADQERFRARQEENQRMIWQG 501          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: A0A8J2SH94_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH94_9STRA)

HSP 1 Score: 313 bits (801), Expect = 1.410e-94
Identity = 208/495 (42.02%), Postives = 272/495 (54.95%), Query Frame = 0
Query:   11 VKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDFEENG------DAPKPAAPAKPAESGTKEGEEDGAAGEEDGEKKTAAPASLTRKAVMAPIAKAARAL-DKTTPPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDEELTVVTDYQPGVATGASAGPIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALAD---GESMANSLGSLARKRGDIFGSAEDEEKQLLAESNARKKRKEDVTR---VMWDGN 492
            V G+I PPPDIRAIVDKTA FVA+NGK FE RIQAS +G+S KF FMRP+DPY AYYEFKIR+ EEN       + PK  AP                      E K AA     R  V AP+ +A + L ++TTPP P    +  P+ ++ LD ++IKLTAQ+TA  GR FL+ LA+RE +N QF FLK TH LFSYFT LVDAYT+ L P    +  V+   D +H L+RC  RWD+ R    K+    A  DADR +F+++DWHDFVVVE I+FP DEL  P +G      GV +                E   P +   A  XXXXXXX                                    ++ VV DY P VA+G    P  + DP+TG ++    +++HMRIQLLDP+W+E+Q + AA++ +    D   GE +A SL S A KR DIFGS E EE ++L       K+K++ +    ++WDG+
Sbjct:   27 VTGVIRPPPDIRAIVDKTALFVARNGKQFEARIQASAEGQSQKFAFMRPNDPYNAYYEFKIREVEENDGELKVVEKPKVEAPVTT-------------------EVKAAASTVSKRATVAAPVQRALQGLGEETTPPVPLTAQLTTPSSVTPLDAEIIKLTAQYTAASGRQFLAGLAQREQRNPQFDFLKPTHVLFSYFTQLVDAYTRALAPPPELRAEVKRVEDPEHALKRCARRWDWSRRVDEKERREKALRDADRASFQAVDWHDFVVVEVIDFPKDELALPAQG------GVSV---------------EEPGAPGMQGTAVPXXXXXXXPAA---------------------------------DIQVVQDYVPRVASGGVEAPRTMKDPLTGDEVPIERMTEHMRIQLLDPRWREEQRKLAARRGEDDRGDRAGGEEIAQSLASFAAKRNDIFGSTEAEEAEIL-----EAKQKDEPSNSGGIIWDGH 443          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: A0A7R9U8G3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8G3_9STRA)

HSP 1 Score: 277 bits (708), Expect = 9.670e-81
Identity = 226/497 (45.47%), Postives = 299/497 (60.16%), Query Frame = 0
Query:    3 EQPYQGRSVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKPAAPAKPAESGTKEGEEDGAAGEEDGEKKTAAPASLTRKAVMAPIAKAARALDKTTPPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVE-PLEGLDIAD-DGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDEELTVVTDYQPGVATGASAGPIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLGSLARKRGDIFGSAEDEEKQLLAESNARKKRKEDVTRVMWDGNIATAD 497
            E+  QG+ V GII PPPDIRA+ DKTA+FVAKNGK+FEERI  S  G   KF+FMR +D YYAYYE KIR+FEE G A +     + AE                             K +++PI  A + + +   P P +F +     LS  D+D+IKL AQFTA+GGR FL+EL  RE +N QF FL+ T  LF++F++LVDAY+K++      K  +    D    +ER V RW  ER  +A ++A   A  A+R+AF SIDWHDF +VETI+F  DEL+E P EG    + DGV                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+   +E + VV DY+P V T  +  P +V DPV+G+ +   ++S+HMRIQL+DPK++ +  RA  +Q +T +A G S+A++L S A +R DIFGS E+EE  LL ++   +K  E+   ++W+G  A AD
Sbjct:   36 EKATQGKVV-GIIIPPPDIRAVADKTAQFVAKNGKTFEERILRSAQGH--KFDFMRKNDVYYAYYEHKIREFEE-GTAEENERKRREAEXXXXXXXXXXXXXXXXXXXXXXXQTLERSKVIVSPIVTALKKVPEDEAPPPLDFILPEMAALSVADLDVIKLCAQFTALGGRQFLAELQSREERNAQFDFLRPTSMLFAFFSALVDAYSKLVNQPDGVKKDLRRSLDSTRVIERAVWRWKHERASEAARQAKEEAEVAERMAFTSIDWHDFTIVETIDFGKDELLETPAEGTAQEEQDGVXX----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDAAEEGIKVVADYKPQVKTVTADAPKLVVDPVSGKAVPIDEVSEHMRIQLIDPKYRTETLRAQQRQSETNIAAGSSIADNLKSFANRRVDIFGSTEEEELALLKDARDAQKNAEERQAIIWEGRNAKAD 500          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: A0A024G7N8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7N8_9STRA)

HSP 1 Score: 268 bits (685), Expect = 8.220e-78
Identity = 186/493 (37.73%), Postives = 261/493 (52.94%), Query Frame = 0
Query:    7 QGRSVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDF-------EENGDAPKP----------AAPAKPAESGTKEGEEDGAAGEEDGEKKTAAPASLTRKAVMAPIAKAARALDKTT--PPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDEELTVVTDYQPGVATGASAGPIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLGSLARKRGDIFGSAEDEEKQLLAESNARKKR 480
            QG+ V GIIYPPPDIRA+VDKTA+FVA+NG++FE R+       S KF+F++P DPY+ YYEFK+ +F       EEN  + +           +A AKP E  T     +  +G   G K         +KAV    AK +R L++ T  PP P  + + HPT LSALD +++ LTAQ+TA  G++FL+ LA RE +N QF FLK THALF+YFT+LV++Y +VL  +  Q   +E G  R   L+RCVHR ++ R +  K+   +A +DA+R+A   IDWHDFVVVETI F D+E  +  +    ADD  +  P              E  KPN                                                   + VV DY P V   A+         V G+ ++++D ++HMRI L++PKW+E+  R   KQKDT+ A G ++A+SL   A KR DIF S+ +EE +LL     R+++
Sbjct:   21 QGK-VTGIIYPPPDIRAVVDKTAQFVARNGRNFERRLAGETS--STKFSFLKPSDPYHTYYEFKVNEFTEKDFVIEENKKSQENETTDEHSTEHSASAKPLEKST-----NAESGSNAGSKNEVI---FEKKAVETLTAKVSRKLNEKTVEPPPPELYKIQHPT-LSALDQEIMYLTAQYTAHSGKSFLAGLATREQRNPQFDFLKPTHALFAYFTALVESYAQVLSKSKEQMHRIEEGMSRMKVLDRCVHRMEWMRMEHEKQAKEVAESDAERLALAQIDWHDFVVVETIRFNDEEDAQDEK----ADDAKDELPASDDDMDMEDDSDDEAEKPN---------------------------------------------------IKVVDDYVPLVGKHAAKSVPQSMMTVDGKTISSADANEHMRILLMNPKWREESQRHLEKQKDTSFAAGSAIADSLRRFATKRADIFSSSAEEEAKLLENERKREEK 446          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: F0WZA1_9STRA (Splicing factor 3 subunit putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZA1_9STRA)

HSP 1 Score: 265 bits (677), Expect = 4.010e-75
Identity = 182/488 (37.30%), Postives = 258/488 (52.87%), Query Frame = 0
Query:    7 QGRSVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDF-------EENGDAPKPAAPAK-----PAESGTKEGEEDGAAGEEDGEKKTAAPASLTRKAVMAPIAKAARALDKTT--PPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDEELTVVTDYQPGVATGASAGPIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLGSLARKRGDIFGSAEDEEKQLLAESNARKKR 480
            QG+ V G+IYPPPDIRA+VDKTA+FVA+NG++FE R+       S KF+F++P DPY+AYYEFK+ +F       EEN  +             P +SG  E + D     +             +KAV    AK +R L++ T  PP P  + + HPT LSALD +++ LTAQ+TA  G++FL+ LA RE +N QF FLK THALF+YFT+LV++Y +VL  +  Q   +E G  R   L+RCVHR ++ R +  K+   +A +DA+R+A   IDWHDFVVVETI F D+E V+  +     +D  E  P              E+ KP                                                   ++ VV DY P V   AS         V G+ ++++D ++HMRI L++PKW+E+  R   KQKDT+ A G ++A+SL   A KR DIF S+ +EE +LL     R+++
Sbjct:  221 QGK-VTGLIYPPPDIRAVVDKTAQFVARNGRNFERRLAGETS--STKFSFLKPSDPYHAYYEFKVNEFTEKEFVTEENKKSXXXXXXXXXXXXXPEKSGIAENKLDAVNKNQ---------VIFEKKAVETLTAKVSRKLNEKTIEPPPPELYKIQHPT-LSALDQEIMYLTAQYTAHSGKSFLAGLATREQRNPQFDFLKPTHALFAYFTALVESYAQVLSKSKDQMHRIEEGMSRMKVLDRCVHRMEWMRMEHEKQAKEVAESDAERLALAQIDWHDFVVVETIRFNDEEDVQDEK----TEDAKEERPASDDDMDMEDESDEEIEKP---------------------------------------------------DIKVVDDYVPLVGKNASKSVPQSMMTVDGKTISSADANEHMRILLMNPKWREESQRHLEKQKDTSFAAGSAIADSLRRFATKRADIFSSSAEEEARLLENEKKREEK 640          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: A0A225WPU9_9STRA (Splicing factor 3 subunit n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPU9_9STRA)

HSP 1 Score: 250 bits (639), Expect = 3.740e-71
Identity = 191/475 (40.21%), Postives = 265/475 (55.79%), Query Frame = 0
Query:    7 QGRSVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKPAAPAKPAESGTKEGEEDGAAGEEDGEK--------KTAAPASLTRKAVMAPIAKAARALDKTT--PPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDEELTVVTDYQPGVATGASAGPIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLGSLARKRGDIFGSAEDEEKQLL 471
            QGR V GIIYPPPDIRA+VDKTA+FVA NG++FE RI       S KF+F+R  DPY+AYYE K+ +F     A K  +P++P +   +E      AG E  EK        +TA    + +KAV    A+ A+ + K    PP    F + HPT LSALD +++ LTAQ+TA+ G +FLS LA RE +N QF FLK TH LF+YFT+LV+ YT VL    AQ   +E G +R   L+RCVHR +++R +Q +++   A +DA+R A   +DWHDFVVVETI F D++        D+     +                                                  XXXXXXXXXXXXXXXXX      E+ VV DY P      +  P++  D   G+ +++++ ++HMRI L++PKW+E+  R   KQK+++ A G ++A+SL   A KR DIF S+ +EE +L+
Sbjct:   12 QGR-VTGIIYPPPDIRAVVDKTAQFVANNGRAFESRIVGER--MSTKFSFLRESDPYHAYYEHKVSEFI----AQKDESPSEPQDQ-EQEKATTQTAGSEQQEKAQEVVKAAETAGDVVVEKKAVQDVTAQVAKKIKKKELEPPPEEMFIIKHPT-LSALDQEIMYLTAQYTALSGSSFLSGLATREQRNPQFDFLKPTHPLFAYFTALVERYTLVLAKQDAQMQRIEEGMERMKVLDRCVHRMEWQRTEQERRDKEAADSDAERRALAQVDWHDFVVVETINFDDED--------DLGASATDX-------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXEIKVVEDYVPQATAATAQQPLLSVD---GKTLSSAEANEHMRILLMNPKWREETQRHLEKQKESSYAAGSAIADSLRRFATKRADIFASSAEEEARLM 417          
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Match: D0N1H1_PHYIT (Splicing factor 3 subunit, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N1H1_PHYIT)

HSP 1 Score: 249 bits (636), Expect = 4.040e-71
Identity = 201/468 (42.95%), Postives = 267/468 (57.05%), Query Frame = 0
Query:    7 QGRSVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGKSAKFNFMRPHDPYYAYYEFKIRDF----EENGDAPKPAAPAKPAESGTKEGEEDGAAGEEDGEKKTAAPASLTRKAVM---APIAKAARALDKTTPPRPFEFSVGHPTGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKKEASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVELPPXXXXXXXXXXXXPAEMTKPNLLPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGEDEELTVVTDYQPGVATGASAGPIMVTDPVTGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLGSLARKRGDIFGSAEDEE 467
            QGR V GIIYPPPDIRA+VDKTA+FVA NG++FE RI       SAKF+F+R  DPY+AYYE K+ +F    E+   AP+P  P   AE   +  +E   A E      T     + +KAV    A +AK  R  +   PP    F + HPT LSALD +++ LTAQ+TA+ G +FLS LA RE +N QF FLK TH LF+YFT+LV++YT VL    AQ   +E G +R   L+RCVHR +++R +Q +++   A  DA+R A   +DWHDFV+VETI F D                                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXX      E+ VV DY P    G +  P++  D   G+ +++++ ++HMRI L++PKW+E+  R   KQK+++ A G ++A+SL   A KR DIF S+ +EE
Sbjct:   13 QGR-VTGIIYPPPDIRAVVDKTAQFVANNGRAFESRIVGERV--SAKFSFLRESDPYHAYYEHKVSEFTVKKEDPLPAPEPQQPEHTAEGQQETTQEIAKAVE------TVGDVVVEKKAVQDVTAQVAKNIRGRELEPPPEEI-FIIKHPT-LSALDQEIMYLTAQYTALSGSSFLSGLATREQRNPQFDFLKPTHPLFAYFTALVESYTLVLAKQDAQMKRIEDGMERMKVLDRCVHRMEWQRTEQEREDKEAAEGDAERRALAQVDWHDFVIVETINFDD---------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVEDYVPQATAGTTQQPLLSVD---GKTLSSAEANEHMRILLMNPKWREETQRHLEKQKESSYAAGSAIADSLRRFATKRADIFASSAEEE 409          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6147.16916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWN9_ECTSI5.120e-24779.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CLT9_9STRA1.520e-11043.20Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836C863_9STRA1.110e-10161.06Surp module-domain-containing protein n=1 Tax=Trib... [more]
W7TP71_9STRA4.820e-10149.80SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
A0A8J2SH94_9STRA1.410e-9442.02Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7R9U8G3_9STRA9.670e-8145.47Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A024G7N8_9STRA8.220e-7837.73Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0WZA1_9STRA4.010e-7537.30Splicing factor 3 subunit putative n=1 Tax=Albugo ... [more]
A0A225WPU9_9STRA3.740e-7140.21Splicing factor 3 subunit n=1 Tax=Phytophthora meg... [more]
D0N1H1_PHYIT4.040e-7142.95Splicing factor 3 subunit, putative n=2 Tax=Phytop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 541..566
score: 43.08
coord: 301..313
score: 44.62
coord: 355..367
score: 52.31
NoneNo IPR availablePANTHERPTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDcoord: 11..552
NoneNo IPR availablePANTHERPTHR15316:SF1SPLICING FACTOR 3A SUBUNIT 1coord: 11..552
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 158..211
e-value: 9.3E-15
score: 65.0
coord: 22..76
e-value: 4.3E-18
score: 76.1
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 22..71
e-value: 3.2E-15
score: 55.8
coord: 159..209
e-value: 2.7E-15
score: 56.1
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 24..67
score: 17.269
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 160..202
score: 14.017
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790coord: 19..79
e-value: 1.9E-22
score: 80.8
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790coord: 153..211
e-value: 3.2E-20
score: 73.9
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 3..72
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 137..210
IPR022030Splicing factor 3A subunit 1PFAMPF12230PRP21_like_Pcoord: 227..455
e-value: 7.8E-31
score: 107.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6147contigF-serratus_M_contig6147:968..9330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6147.16916.1mRNA_F-serratus_M_contig6147.16916.1Fucus serratus malemRNAF-serratus_M_contig6147 968..9330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6147.16916.1 ID=prot_F-serratus_M_contig6147.16916.1|Name=mRNA_F-serratus_M_contig6147.16916.1|organism=Fucus serratus male|type=polypeptide|length=569bp
MVEQPYQGRSVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEDGK
SAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKPAAPAKPAESGTKEGEED
GAAGEEDGEKKTAAPASLTRKAVMAPIAKAARALDKTTPPRPFEFSVGHP
TGLSALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFS
YFTSLVDAYTKVLQPTAAQKVYVESGRDRQHTLERCVHRWDFEREKQAKK
EASLAAADADRIAFRSIDWHDFVVVETIEFPDDELVEPLEGLDIADDGVE
LPPPPPPAPEPEPVAPAEMTKPNLLPEAEDEDEDEDMDMDMDSDQEDGEG
ADQPPLPPGPPPPPPPPRHGEDEELTVVTDYQPGVATGASAGPIMVTDPV
TGQKMAASDLSDHMRIQLLDPKWKEQQARAAAKQKDTALADGESMANSLG
SLARKRGDIFGSAEDEEKQLLAESNARKKRKEDVTRVMWDGNIATADAAR
QAALAKQIAAPRTATRTGPISNIGPQIPGRGVVRAPPPPLPAGNPPPPPP
PPGNPPPPPPPPESPPPPP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000061Surp
IPR035967SWAP/Surp_sf
IPR022030SF3A1