prot_F-serratus_M_contig6145.16913.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6145.16913.1
Unique Nameprot_F-serratus_M_contig6145.16913.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length203
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig6145.16913.1 vs. uniprot
Match: D8LLX0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX0_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.850e-5
Identity = 48/157 (30.57%), Postives = 64/157 (40.76%), Query Frame = 0 
Query:   22 VRVRSVASDCVVLCMQTLRFILGWAGQAAGSAVKNTYTAAPSSVPASETAGSGDGGRVSDEGISVGAPPSATPAPERTDATVTRWDMGAVADTDYGEVPWCLHGFTALLSDETESGTTVGGGSSGAPSATPCFICPLVDRARRCAFVQVAVRQSNDG 178
            VR RS ASD  +LCMQTLRF++GW   + G+  K+ +        AS    +G        G   GA           +A +    + A   +D                           G+   PS T CF+CPL DRARRC FVQV  + +  G
Sbjct: 4106 VRARSAASDSTILCMQTLRFLVGWGEPSDGTGGKSVHRVEQPLFAASAMTAAG--------GFEAGA----------GEAPICLHGLRARPSSDDSGXXXXXXXXXXXXXXX---------GNPTGPS-TVCFVCPLEDRARRCEFVQVTRQAATAG 4234
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6145.16913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLX0_ECTSI1.850e-530.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6145contigF-serratus_M_contig6145:203..1211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6145.16913.1mRNA_F-serratus_M_contig6145.16913.1Fucus serratus malemRNAF-serratus_M_contig6145 202..1211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6145.16913.1 ID=prot_F-serratus_M_contig6145.16913.1|Name=mRNA_F-serratus_M_contig6145.16913.1|organism=Fucus serratus male|type=polypeptide|length=203bp
PGSTSATISRGVTVCLDSASAVRVRSVASDCVVLCMQTLRFILGWAGQAA
GSAVKNTYTAAPSSVPASETAGSGDGGRVSDEGISVGAPPSATPAPERTD
ATVTRWDMGAVADTDYGEVPWCLHGFTALLSDETESGTTVGGGSSGAPSA
TPCFICPLVDRARRCAFVQVAVRQSNDGGPVAGRRMTGPTKAGGDAGEHS
GSA
back to top