prot_F-serratus_M_contig6136.16892.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6136.16892.1
Unique Nameprot_F-serratus_M_contig6136.16892.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length115
Homology
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BLAST of mRNA_F-serratus_M_contig6136.16892.1 vs. uniprot
Match: A0A6H5JBZ3_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ3_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.500e-14
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0 
Query:    5 VKGKTG-------LRGIYLPSLIDPGRCYKTPIVVGL--MGDGPTNHVASLVGYDGVLSHVSLVDGSGKPLPVWYGVDDEREGSPCPETVLLQKYMELT 94
            V+G+ G       +RG+YLP+L+DP  CYK PI VG   +  G   H  +LVG DG L H+ LVD  G  LP+ YG+      +P PE   L+ Y+  T
Sbjct:  149 VRGRNGEPYAPSDVRGVYLPTLVDPDVCYKLPIAVGYTCVTVGKVGHFTALVGVDGELRHLPLVDEHGDGLPIRYGLPPATVANPRPEEDFLEDYLMTT 247
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BLAST of mRNA_F-serratus_M_contig6136.16892.1 vs. uniprot
Match: D8LJP6_ECTSI (Zn-finger (Ran-binding)-3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP6_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.420e-9
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0 
Query:    5 VKGKTG-------LRGIYLPSLIDPGRCYKTPIVVGL--MGDGPTNHVASLVGYDGVLSHVSLVDGSGKPLPV 68
            V+G+ G       +RG+YLP+L+DP  CYK PI VG   +  G   H  +LVG D  L H+ LVD  G  LP+
Sbjct:   48 VRGRNGEPYAPSDVRGVYLPTLVDPDVCYKLPIAVGYTCVAVGKVGHFTALVGVDRELRHLPLVDEHGDDLPI 120
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6136.16892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBZ3_9PHAE4.500e-1441.41OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJP6_ECTSI2.420e-943.84Zn-finger (Ran-binding)-3 n=1 Tax=Ectocarpus silic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6136contigF-serratus_M_contig6136:15433..16640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6136.16892.1mRNA_F-serratus_M_contig6136.16892.1Fucus serratus malemRNAF-serratus_M_contig6136 6063..16640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6136.16892.1 ID=prot_F-serratus_M_contig6136.16892.1|Name=mRNA_F-serratus_M_contig6136.16892.1|organism=Fucus serratus male|type=polypeptide|length=115bp
MHGSVKGKTGLRGIYLPSLIDPGRCYKTPIVVGLMGDGPTNHVASLVGYD
GVLSHVSLVDGSGKPLPVWYGVDDEREGSPCPETVLLQKYMELTWAEGSD
GTASMGKEQRVCCI*
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