prot_F-serratus_M_contig6.16606.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6.16606.1
Unique Nameprot_F-serratus_M_contig6.16606.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length231
Homology
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BLAST of mRNA_F-serratus_M_contig6.16606.1 vs. uniprot
Match: A0A6H5K8D7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D7_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 2.220e-61
Identity = 110/234 (47.01%), Postives = 141/234 (60.26%), Query Frame = 0 
Query:   13 LILVAIHVCDG--KRSKRWTYPRPQWPVPEHRMDTNPCRFFLWDPHSAAKFCECSRLLKAAAKTSLWEDGHKQLWLRIPYASRLLELFPCQQHSLSRCSRCGHGCWEHVRWAAQRRRDRPFEKLLLDPASHGIPDEAPLDYREVSVLVGPKAASTRGMDVDAHKNGP-------------------GSLG------RALAVVAEAQRTSMLQVAGVRVTSAAARAAFKEVQDLK 219
            LI++ +  C+G  K+SKRWTYPRPQWPVP HRMD  PCR+FLWD  SAA+FCEC+R L++ A  +LWED H QLWLR+P++S LL LFPCQQHSL+RC++CGH    HV    +RR+D  ++K + D A   +      DYR  SV    K  S   +D      G                    G +G      R LAV+AEAQR ++LQ +G+ VTS  AR+AFK V D K
Sbjct:   13 LIVILLLCCNGSAKKSKRWTYPRPQWPVPGHRMDAVPCRWFLWDVASAARFCECTRHLESVADQTLWEDSHGQLWLRVPFSSPLLRLFPCQQHSLTRCAKCGHEYRAHVEHTLKRRKDGDYDKFIRDHARR-VGGRGAQDYRGGSVFSDQKRTSRERVDASVGSLGSSSGNGNNSXXXXXXXXXXXGGIGNGSGWRRRLAVLAEAQRAALLQTSGIAVTSETARSAFKAVHDEK 245
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6.16606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8D7_9PHAE2.220e-6147.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.874
NoneNo IPR availableTMHMMTMhelixcoord: 4..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6contigF-serratus_M_contig6:658189..661650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6.16606.1mRNA_F-serratus_M_contig6.16606.1Fucus serratus malemRNAF-serratus_M_contig6 657270..661667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6.16606.1 ID=prot_F-serratus_M_contig6.16606.1|Name=mRNA_F-serratus_M_contig6.16606.1|organism=Fucus serratus male|type=polypeptide|length=231bp
MSRGLVLPALLCLILVAIHVCDGKRSKRWTYPRPQWPVPEHRMDTNPCRF
FLWDPHSAAKFCECSRLLKAAAKTSLWEDGHKQLWLRIPYASRLLELFPC
QQHSLSRCSRCGHGCWEHVRWAAQRRRDRPFEKLLLDPASHGIPDEAPLD
YREVSVLVGPKAASTRGMDVDAHKNGPGSLGRALAVVAEAQRTSMLQVAG
VRVTSAAARAAFKEVQDLKTAERPKRKRRR*
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