prot_F-serratus_M_contig1517.3555.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1517.3555.1
Unique Nameprot_F-serratus_M_contig1517.3555.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length457
Homology
BLAST of mRNA_F-serratus_M_contig1517.3555.1 vs. uniprot
Match: D8LK15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK15_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 1.270e-94
Identity = 212/464 (45.69%), Postives = 260/464 (56.03%), Query Frame = 0
Query:    1 MEPKRKW---YQANKTRDGHRSTDGAPEADRQDERQQSTKKPR-ISAISIGQVKGHQAVVGTCDVRHDRAATAELIDLLNAFADVLIVPPKGRGARGVSPNKASSRARDDASVVNSGLA----ASAENQTSATQSSGEVEQPSVLLSVEEMVREEAKALRTGQDKIHRFKSVNTSVKGVIMVCVMDPTLDVLLLVDALFAEIRETGKRRSRFLERVTPIQVTSFSEIESFKAAVQPIVFSALPPVAEGVPSLASGLAAEAVDCSREVPEIDGGDKGSGTVAVLKGPETAKEPSNSDNGVGGQALQTTTGAAGKGEGRREVNGHSDKKGVHADLGEPPDHGAPDEGARCMQQATCPGRAEEVKTGGRGVEAEGGASAIITRDERWKFRVDVRKRNSALKRMALIEAVAESVGKGHSASMASPNVTIVVEAIKSVVGASVLFNYALNREYSISRLQDAVCGNILDS 456
            M PK+KW   YQA + R+G +  +G           +  KKPR  +AI++G VKGHQAVVGTCDVRHDR ATAEL+D+LN+ AD +     G  A       AS  A   ++    G      A A        + G  E     +SVEEMV++EA ALR+G DK+HRFKSVNTSVKGV+MVCV+DP +D+L LVD L+ EIR T  RRSRFLERVTP+QVT++SE+++ K AV PIV  ALPPVAE VP L + + A              G K +G  AV     T     +S + V  +A +T     G+G      NG  D                                 + V  G          +   T D+RWKFR D+R+RNS LKR+ LI A   SVG GHS +M SP VTIVVEA+KSVVG SVLFNYA N EYSISRLQDAVCG ILDS
Sbjct:    1 MGPKKKWTGHYQAKRPREGEQDGNGGSG-------DEGPKKPRRTAAINLGNVKGHQAVVGTCDVRHDRQATAELVDMLNSVADDMYPETDGDDAAAEDAATASPVAPTPSAEGKPGNGDSDGARAXXXXXXXPAGGAAE-----MSVEEMVKQEADALRSGSDKVHRFKSVNTSVKGVVMVCVVDPKVDILRLVDTLYDEIRTTKMRRSRFLERVTPLQVTAYSELDAIKEAVGPIVSKALPPVAEEVPPLPTAVRAS-------------GAKATGPAAVKTEKGTPAPKDSSGDKV--KAAETEE-KEGEGAAASAPNGTGDXXXXXXXX--------------XXXXXXXXXEGDVVSDG----------NEKKTCDKRWKFRADIRRRNSGLKRLDLINAAVGSVGVGHSVNMTSPEVTIVVEAVKSVVGVSVLFNYARNHEYSISRLQDAVCGAILDS 412          
BLAST of mRNA_F-serratus_M_contig1517.3555.1 vs. uniprot
Match: A0A5D6XRX3_9STRA (THUMP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRX3_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.560e-7
Identity = 49/187 (26.20%), Postives = 88/187 (47.06%), Query Frame = 0
Query:   50 KGHQAVVGTCDVRHDRAATAELIDLLNAFADVLIVPPKGRGARGVSPNKASSRARDDASVVNSGLAASAENQTSATQSSGEVEQPSVLLSVEEMVREEAKALRTG--QDKIHRFKSVNTSVKGVIMVCVMDPTLDVLLLVDALFAEIRETGKRRSRFLERVTPIQVTSFSEIESFKAAVQPIVFSAL 234
            KG   V+ TCD   +R +  + +D+LN  AD               P    +R   DA   +SG  A+A                S   +V++ +++E  ALR    + K  RF +++T VKGVI++ ++DP +    LV  +FAE+  + +  SRF+ R+ P++    +  +  +   +P++ + L
Sbjct:   32 KGSGGVLVTCDKTKERQSVRDTLDVLNDAADKFF------------PATEMARLAGDAEETDSGATAAAS---------------SAADTVQKKLQDEINALRADAKKRKTGRFTALDTGVKGVILIQILDPEISARALVLRIFAEVEASKEFASRFISRLIPLEKIGHAARDDIRELARPMIAAQL 191          
BLAST of mRNA_F-serratus_M_contig1517.3555.1 vs. uniprot
Match: A0A835Z5R2_9STRA (THUMP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.730e-7
Identity = 29/74 (39.19%), Postives = 47/74 (63.51%), Query Frame = 0
Query:  168 VKGVIMVCVMDPTLDVLLLVDALFAEIRETGKRRSRFLERVTPIQVTSFSEIESFKAAVQPIVFSALPPVAEGV 241
            ++GV++VCV+D TLD++ +   LF+++R+T  RRSRFL R  P+  T + + ES     +P+V  A   + E V
Sbjct:    1 LRGVVVVCVLDKTLDIVSITAELFSDVRKTKVRRSRFLIRAVPLATTCYGDAESLVGIAKPLVDEAFETLREPV 74          
BLAST of mRNA_F-serratus_M_contig1517.3555.1 vs. uniprot
Match: A0A1V9Z6J2_9STRA (THUMP domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6J2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.150e-6
Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0
Query:  142 EMVREEAKALRTGQDKIHRFKSVNTSVKGVIMVCVMDPTLDVLLLVDALFAEIRETGKRRSRFLERVTPIQVTSFSEIESFKAAVQPIV 230
            E + EE K L+  +DK  RF +++T VKG+IM+ ++D  + V+ LVD +F E+ +T +  SRF++R+ P++   F  +E    AV P +
Sbjct:   83 EKLAEEIKGLK--KDK-GRFVALDTGVKGIIMIQIVDRKIPVIALVDRIFEEVVDTKQFSSRFIQRLIPLENLCFPSVEDITTAVTPFI 168          
BLAST of mRNA_F-serratus_M_contig1517.3555.1 vs. uniprot
Match: UPI00189BAD3F (THUMP domain-containing protein 1-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI00189BAD3F)

HSP 1 Score: 56.2 bits (134), Expect = 5.590e-5
Identity = 32/96 (33.33%), Postives = 56/96 (58.33%), Query Frame = 0
Query:  139 SVEEMVREEAKALRTGQDKIHRFKSVNTSVKGVIMVC--VMDPTLDVLLLVDALFAEIRETGKRRSRFLERVTPIQVTSFSEIESFKAAVQPIVFS 232
            S+E+ + EE   L+  +DK+ RF+ V T V G   V   V DP      LV A+F +++   ++RSRF++R+ P+Q T  + +++ K  V+ ++ S
Sbjct:   73 SIEDDIAEELNELKESKDKVRRFQKVKTDVAGNFFVTTTVDDPGR----LVTAIFEDLKAKHEQRSRFIQRLLPVQTTCKANLDTMKKTVETVLAS 164          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1517.3555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LK15_ECTSI1.270e-9445.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6XRX3_9STRA1.560e-726.20THUMP domain-containing protein n=1 Tax=Pythium br... [more]
A0A835Z5R2_9STRA1.730e-739.19THUMP domain-containing protein n=1 Tax=Tribonema ... [more]
A0A1V9Z6J2_9STRA1.150e-637.08THUMP domain-containing protein n=1 Tax=Thraustoth... [more]
UPI00189BAD3F5.590e-533.33THUMP domain-containing protein 1-like n=1 Tax=Der... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2300.10coord: 366..432
e-value: 2.4E-8
score: 36.3
NoneNo IPR availableSUPERFAMILY143437THUMP domain-likecoord: 372..430
IPR040183THUMP domain-containing protein 1-likePANTHERPTHR13452THUMP DOMAIN CONTAINING PROTEIN 1-RELATEDcoord: 36..446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1517contigF-serratus_M_contig1517:132323..133951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1517.3555.1mRNA_F-serratus_M_contig1517.3555.1Fucus serratus malemRNAF-serratus_M_contig1517 131945..134031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1517.3555.1 ID=prot_F-serratus_M_contig1517.3555.1|Name=mRNA_F-serratus_M_contig1517.3555.1|organism=Fucus serratus male|type=polypeptide|length=457bp
MEPKRKWYQANKTRDGHRSTDGAPEADRQDERQQSTKKPRISAISIGQVK
GHQAVVGTCDVRHDRAATAELIDLLNAFADVLIVPPKGRGARGVSPNKAS
SRARDDASVVNSGLAASAENQTSATQSSGEVEQPSVLLSVEEMVREEAKA
LRTGQDKIHRFKSVNTSVKGVIMVCVMDPTLDVLLLVDALFAEIRETGKR
RSRFLERVTPIQVTSFSEIESFKAAVQPIVFSALPPVAEGVPSLASGLAA
EAVDCSREVPEIDGGDKGSGTVAVLKGPETAKEPSNSDNGVGGQALQTTT
GAAGKGEGRREVNGHSDKKGVHADLGEPPDHGAPDEGARCMQQATCPGRA
EEVKTGGRGVEAEGGASAIITRDERWKFRVDVRKRNSALKRMALIEAVAE
SVGKGHSASMASPNVTIVVEAIKSVVGASVLFNYALNREYSISRLQDAVC
GNILDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040183THUMPD1-like