prot_F-serratus_M_contig1517.3553.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1517.3553.1
Unique Nameprot_F-serratus_M_contig1517.3553.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length244
Homology
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BLAST of mRNA_F-serratus_M_contig1517.3553.1 vs. uniprot
Match: D8LK11_ECTSI (GBBH-like_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK11_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 8.020e-21
Identity = 67/135 (49.63%), Postives = 84/135 (62.22%), Query Frame = 0 
Query:  122 RRHVSPFAGGSWGKQEPGAADGEVRE-IARR-----EEEVLEALAAVHEPCTNKEVVQLGLVQDLHI-------------GDEGA-----VTFTVRVPTLALPGRNELAAACEKAVLALPWVTSAAALTKARRPR 232
            RRH+S + G  WG+   G  +    E +ARR     EEEVL  L+ V EPCT K+VV+LG VQD+ I             G++ A     ++FT+RVPTLALPGR+ LA+ CE A+LALPWV SA ALTK RRPR
Sbjct:  110 RRHMSLWGG--WGQGTSGGPNSSPEEELARRWRQEKEEEVLAILSGVVEPCTGKDVVELGFVQDVRIDEVVHGEQPQDNTGEDSAEAPLAISFTLRVPTLALPGRDTLASECEAALLALPWVASANALTKVRRPR 242
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BLAST of mRNA_F-serratus_M_contig1517.3553.1 vs. uniprot
Match: E8PMA3_THESS (Metal-sulfur cluster biosynthetic enzyme n=19 Tax=Thermaceae TaxID=188786 RepID=E8PMA3_THESS)

HSP 1 Score: 51.6 bits (122), Expect = 7.380e-5
Identity = 34/97 (35.05%), Postives = 49/97 (50.52%), Query Frame = 0 
Query:  123 RHVSPFAGGSWGKQEPGAADGEVREIARREEEVLEALAAVHEPCTNKEVVQLGLVQDLHIGDEGAVTFTVRVPTLALPGRNELAAACEKAVLALPWV 219
            RH      G  G QE  A     +E    +E+VLEAL  V++P     +V LGLV D+ I + G V  T+ +  +  P ++ + A  E AV+ LP V
Sbjct:    4 RHREGLPEGQAGLQEGNANQAGGKEGLPTKEQVLEALKVVYDPEIPVNIVDLGLVYDVEIHENGVVDLTMTLTAIGCPAQDMVKADAEMAVMRLPGV 100
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BLAST of mRNA_F-serratus_M_contig1517.3553.1 vs. uniprot
Match: UPI00036B0FE7 (iron-sulfur cluster assembly protein n=1 Tax=Thermus scotoductus TaxID=37636 RepID=UPI00036B0FE7)

HSP 1 Score: 51.6 bits (122), Expect = 7.660e-5
Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0 
Query:  123 RHVSPFAGGSWGKQEPGAADGEVREIARREEEVLEALAAVHEPCTNKEVVQLGLVQDLHIGDEGAVTFTVRVPTLALPGRNELAAACEKAVLALP-WVTSA 222
            RH      G  G QE  A     +E    +E+VLEAL  V++P     +V LGLV D+ I + G V  T+ +  +  P ++ + A  E AV+ LP W  SA
Sbjct:    4 RHREGLPEGQAGLQEGNANQAGGKEGLPTKEQVLEALKVVYDPEIPVNIVDLGLVYDVEIHENGVVDLTMTLTAIGCPAQDMVKADAEMAVMRLPIWHPSA 104
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1517.3553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LK11_ECTSI8.020e-2149.63GBBH-like_N domain-containing protein n=2 Tax=Ecto... [more]
E8PMA3_THESS7.380e-535.05Metal-sulfur cluster biosynthetic enzyme n=19 Tax=... [more]
UPI00036B0FE77.660e-535.64iron-sulfur cluster assembly protein n=1 Tax=Therm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 147..244
e-value: 3.9E-12
score: 48.2
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 151..238
IPR002744MIP18 family-likePFAMPF01883FeS_assembly_Pcoord: 152..222
e-value: 8.6E-13
score: 48.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1517contigF-serratus_M_contig1517:74345..75925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1517.3553.1mRNA_F-serratus_M_contig1517.3553.1Fucus serratus malemRNAF-serratus_M_contig1517 74345..75966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1517.3553.1 ID=prot_F-serratus_M_contig1517.3553.1|Name=mRNA_F-serratus_M_contig1517.3553.1|organism=Fucus serratus male|type=polypeptide|length=244bp
MLPATKAGSMASFTKMWCKGRIVYVGIRERSILPSADAYVRGNADLAINS
RQQSCSGTKQGPVISSPVSLYGSMTAGNPILGTIRWRTLSTLISRHRIRT
HRTATCSFPSKTWRGLDVSNSRRHVSPFAGGSWGKQEPGAADGEVREIAR
REEEVLEALAAVHEPCTNKEVVQLGLVQDLHIGDEGAVTFTVRVPTLALP
GRNELAAACEKAVLALPWVTSAAALTKARRPRRQQPNSARPKMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf
IPR002744MIP18-like