prot_F-serratus_M_contig1510.3534.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1510.3534.1
Unique Nameprot_F-serratus_M_contig1510.3534.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1211
Homology
BLAST of mRNA_F-serratus_M_contig1510.3534.1 vs. uniprot
Match: D7FPZ9_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ9_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 6.970e-44
Identity = 114/252 (45.24%), Postives = 142/252 (56.35%), Query Frame = 0
Query:  949 VLPPAIRRIMSEEMVRVLTLRRRDLHAVARQSPGLLNEAVEQAFLMLENAVSTAATHSHALCNMGRLLEDRENPDEALLCFEEASAVDPASAEALCLRAGNLQRRGDLVGATRHFERALVQGKFFGLACYGLSQVNAVQGKYAGAIGALVHWLD----------EQNKQCSGSGEPDRAS----QAKGLVQLGDAYRGLGQDECAQRAYQRAIEMDGGCSEAYFKLGSLLQAQGGRDAEALEAFGRAVNAAA 1186
            +LP  I R++ EE+ RVL L RRDL  VAR SP LL  AV ++F M E AV TAA  SHAL NMGRLLEDR +PDEALLCF+EAS  D                                + +    A  GL QV   Q KYA A+ A   WL           E     SG+ + ++ +     AKGLVQLG+A+  LGQD+ A+ AY+RA+  D  CSEA+F+LG+LLQ + G+DAEAL+AF  AV AAA
Sbjct:   51 LLPAPIARVLHEEVFRVLALNRRDLDIVARVSPELLQSAVVKSFWMFEEAVFTAAARSHALSNMGRLLEDRGHPDEALLCFQEASTADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDESHWSAWCGLGQVKGAQAKYAEAVEAFSKWLQGGGGGEGGAAENGNTGSGAPQAEKVAGARFMAKGLVQLGEAHVKLGQDKQARSAYERAVSADENCSEAHFQLGTLLQ-RCGQDAEALKAFASAVKAAA 301          
BLAST of mRNA_F-serratus_M_contig1510.3534.1 vs. uniprot
Match: A0A482S8G9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8G9_9ARCH)

HSP 1 Score: 107 bits (268), Expect = 1.940e-21
Identity = 67/231 (29.00%), Postives = 123/231 (53.25%), Query Frame = 0
Query:   73 YPRLMSVIVGIDD-LDPQLKTLSWVVRLMDELYDARRRADQASFAAEEDYCNLDARTRKNVSFPLFAYKHLKNRHGIKYVVRAACLDLVCNTHIYRKRHSGVEVFARFLEEFYGMKELCFYLDIRAEAHRVARVCPRRRSVI--------KTVWMTHADCVRVAKGVFLDTSTLYFRDLIGTVESQMMDRPLERSQSNPDKRRISLSDFLYLAMVCFVSPEEPKEGSGREN 294
            YPR  S+I    D + P+L+ LSW+++ ++++YDAR   ++     E+D    D      + FP+F  + +    G+K ++   C D++ + + YR+ +  +E+FARFL+EFY   +L FYL +R+   +V  V  + R V         ++ WM++ + V +A+ VF   S   +RD I  +  QM+    + +    D RRI ++++L+L++V +    +   G G  N
Sbjct:  112 YPRFSSLIANRGDTVKPKLRPLSWLMKHVEDVYDARFEHEKNEVEREDDSPAFDLIL---LIFPIFVVRKVGTNVGLKSLLDQMCWDILHSVNTYRRDYLELEIFARFLQEFYDHDDLLFYLYVRSVISKVLHVNFKNRWVKFDGPGRQPRSQWMSYREAVHIARIVFGSDSEDMYRDFILLITPQMIGSKTDTT----DTRRIDITEYLHLSVVGYHQNSKRGGGGGEPN 335          
BLAST of mRNA_F-serratus_M_contig1510.3534.1 vs. uniprot
Match: A0A7S3HLQ1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLQ1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.930e-19
Identity = 63/233 (27.04%), Postives = 126/233 (54.08%), Query Frame = 0
Query:   58 LNVVHVAGQAVTLSLYPRLMSVIVGIDD-LDPQLKTLSWVVRLMDELYDARRRADQASFAAEEDYCNLDARTRKNVSFPLFAYKHLKNRHGIKYVVRAACLDLVCNTHIYRKRHSGVEVFARFLEEFYGMKELCFYLDIRAEAHRVARVCPRRR---------SVIKTVWMTHADCVRVAKGVFLDTSTLYFRDLIGTVESQMMDRPLERSQSNPDKRRISLSDFLYLAMVCF 280
            ++V  VA + +  + YPR  ++I    D + P+ +  +WV++++++++D R   ++     E++  + D      + FP+F  + +    G+K +V   C DL+ N ++YRK +  +EVF RFL+EFY   +L F+L +R+   +V  +  + R            K +W+++ +   VA+ VF   +   FRD +  +  QM+    E++ S  D RRI ++++L+L++V +
Sbjct:   93 IDVTVVAPEHLEYNAYPRFTALIANNGDTVRPRQRPFTWVMKIVEDIFDHRFSLEKNDIEREDESPSFDLML---LIFPVFVVRKIGTNVGLKTIVDQTCWDLLYNVNLYRKDYLELEVFGRFLQEFYDHDDLLFFLYVRSVLAKVLHISFKARWQKKFDGVSGQPKALWISYKEAAHVARIVFGSDNEGLFRDFMRLITPQMVG---EKTASG-DSRRIDITEYLHLSVVGY 318          
BLAST of mRNA_F-serratus_M_contig1510.3534.1 vs. uniprot
Match: A0A812U9B1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812U9B1_9DINO)

HSP 1 Score: 102 bits (254), Expect = 3.190e-18
Identity = 66/200 (33.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query:   71 SLYPRLMSVIVGIDDLDPQLKTLSWVVRLMDELYDARRRADQASFAAE-EDYCNLDA---RTRKNVSFPLFAYKHLKNRHGIKYVVRAACLDLVCNTHIYRKRHSGVEVFARFLEEFYGMKELCFYLDIRAEAHRVARVCPRRR------SVI------KTVWMTHADCVRVAKGVFLDTSTLYFRDLIGTVESQMMDRP 254
            S+YP+  S+I   D++ P+L+ LSW++RL++E+YD R   D A    E E      A   ++R    FP F  +    R+G+  ++   C DL+ N H  RK +  VEVFARFLEE+Y   +L F+L +R+   +  R   R R      SV+      K ++M+  +C  VA+ VF       +R  +  V+S++   P
Sbjct:   96 SVYPKFYSLISLRDNIAPKLRPLSWLMRLIEEIYDNRYARDTAELREEAEGAAGATAAPPKSRGPSDFPSFVVEFFSKRYGLPQLIDQTCWDLLYNVHAARKEYLEVEVFARFLEEYYDPDDLLFFLYVRSVVQKELRFTFRSRWTELGKSVLGADKTPKAIFMSQRECQLVARVVFGAEGDPLYRTFMALVDSRLQAGP 295          
BLAST of mRNA_F-serratus_M_contig1510.3534.1 vs. uniprot
Match: A0A835ZCA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 3.460e-16
Identity = 54/170 (31.76%), Postives = 84/170 (49.41%), Query Frame = 0
Query:   61 VHVAGQAVTLSLYPRLMSVIVGIDDLDPQLKTLSWVVRLMDELYDARRRADQASFAAEEDYCNLDARTRKNVSFPLFAYKHLKNRHGIKYVVRAACLDLVCNTHIYRKRHSGVEVFARFLEEFYGMKELCFYLDIRAEAHRVARVCPRRRSVIKTVWMTHADCVRVAKGV 230
            V +    V L +YP+   +        P+ + LSWV++ +D++YDA   A  A     +DY            FP F Y+  + R+G K +V  ACL+LVC   ++R R+S VE+FAR LEE+Y  +EL   + +RA    V  V        K +W+    C+  A+ +
Sbjct:   15 VSLGSHTVDLRVYPKFREIAAADPSCAPRRRALSWVLKSIDDIYDAYAAAAAAWEQQAQDYLTEPRPPPCETGFPPFVYRFWRKRYGSKALVLQACLELVCCVDLWRTRNSDVELFARLLEEYYTTQELTCIVGLRAALRDVVGVH------WKQLWLGGQACIPYARAL 178          
BLAST of mRNA_F-serratus_M_contig1510.3534.1 vs. uniprot
Match: A0A2R5G9E0_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9E0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.380e-10
Identity = 42/125 (33.60%), Postives = 72/125 (57.60%), Query Frame = 0
Query:   73 YPRLMSVIVGIDDLDPQLKTLSWVVRLMDELYDARRRADQASFAAEEDYCNLDARTRKNVSFPLFAYKHLKNRHGIKYVVRAACLDLVCNTHIYRKRHSGVEVFARFLEEFYGMKELCFYLDIRA 197
            Y +  S+I   D L+P+ ++L W+  L++++YD     D+A+  ++ D   L         FP+F   HL  R+G++ ++     D+V + H +R+    VEVFARFLEE+Y  ++L FYL +R+
Sbjct:  162 YSKFCSLIEMRDKLEPRPRSLKWLNGLINDVYD-----DRAAVKSKYDLEELRI-------FPVFVMDHLGKRYGLRQIIDQVAWDMVLSVHTHRRHRIEVEVFARFLEEYYDREDLRFYLRVRS 274          
BLAST of mRNA_F-serratus_M_contig1510.3534.1 vs. uniprot
Match: A0A0L0DVL3_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DVL3_THETB)

HSP 1 Score: 66.2 bits (160), Expect = 3.270e-7
Identity = 65/295 (22.03%), Postives = 115/295 (38.98%), Query Frame = 0
Query:   73 YPRLMSVIVGIDDLDPQLKTLSWVVRLMDELYDARRRADQASFAAEEDYCNLDARTRKN----------------------VSFPLFAYKHLKNRHGIKYVVRAACLDLVCNTHIYRKRHSGVEVFARFLEEFYGMKELCFYLDIRAEAHRVARVCPRRRSVIKTVWMTHADCVRVAKGVFLDTSTLYFRDLIGTVESQMMDRPLERSQSNPDKRRISLSDFLYLAMVCFVSPEEPKEGSGRENCKGGTGHTPREGSELGKQSTGVVCVPCVDTPVSALTKSSSLDARRFCCAAR 345
            Y     ++  + ++  +   + W++  ++E+YDAR   D+       ++ +L AR RK                       + FP F YK+ +N+ G+  +V+    D V N    R     +EVF  FLE FY + +L F+L  R + +   R   +         +       + + VF+    L     +  V   +  RP ++ ++      + L + L LA++ F     P E +G  +         R GS+ G  ++        D  VSA     S+  R    AAR
Sbjct:  115 YEEFCKLVGDVSEMRTRRHAVPWLLTQIEEIYDARHAYDEHYETKRAEFIHL-ARRRKYPRGAPPGVDLALTAAELGMEPALGFPEFVYKYFQNKFGLDALVKQNLWDFVYNVETLRPVFLEIEVFGNFLESFYDVTDLQFFLHARIQLYSRFRKVGQATEATSLQMVPVKRLPALIETVFVHKPKLMSASYMVVVRHYVSKRPAKQQKA------LELQEVLNLALILFHKTR-PDEVTGEVDP---AWDPERAGSDFGDDASFTDDGTLTDGSVSANDSQLSVAERNAARAAR 398          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1510.3534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FPZ9_ECTSI6.970e-4445.24TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A482S8G9_9ARCH1.940e-2129.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3HLQ1_9STRA2.930e-1927.04Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A812U9B1_9DINO3.190e-1833.00Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A835ZCA1_9STRA3.460e-1631.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2R5G9E0_9STRA1.380e-1033.60Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A0L0DVL3_THETB3.270e-722.03Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 1154..1188
e-value: 270.0
score: 2.4
coord: 1006..1039
e-value: 0.002
score: 27.4
coord: 1120..1153
e-value: 2.1
score: 17.4
coord: 1040..1073
e-value: 100.0
score: 6.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1006..1039
score: 8.85
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1120..1153
score: 8.054
NoneNo IPR availablePFAMPF13432TPR_16coord: 1126..1182
e-value: 0.014
score: 16.1
coord: 1011..1068
e-value: 8.2E-4
score: 20.0
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 986..1186
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 986..1186
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1114..1202
e-value: 2.8E-11
score: 45.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 975..1108
e-value: 7.6E-15
score: 56.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 987..1191
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1006..1188
score: 18.052

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1510contigF-serratus_M_contig1510:107224..120877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1510.3534.1mRNA_F-serratus_M_contig1510.3534.1Fucus serratus malemRNAF-serratus_M_contig1510 106768..121308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1510.3534.1 ID=prot_F-serratus_M_contig1510.3534.1|Name=mRNA_F-serratus_M_contig1510.3534.1|organism=Fucus serratus male|type=polypeptide|length=1211bp
MLSDDVAVSDGMVCSDSDRQAGVSPKRDDWRRDRRLDTEEGRSDHHIGAE
NDEGHRHLNVVHVAGQAVTLSLYPRLMSVIVGIDDLDPQLKTLSWVVRLM
DELYDARRRADQASFAAEEDYCNLDARTRKNVSFPLFAYKHLKNRHGIKY
VVRAACLDLVCNTHIYRKRHSGVEVFARFLEEFYGMKELCFYLDIRAEAH
RVARVCPRRRSVIKTVWMTHADCVRVAKGVFLDTSTLYFRDLIGTVESQM
MDRPLERSQSNPDKRRISLSDFLYLAMVCFVSPEEPKEGSGRENCKGGTG
HTPREGSELGKQSTGVVCVPCVDTPVSALTKSSSLDARRFCCAARGKGGV
GKYNTENGERAHDKEDISYSPRPLERECHDVERDSLTSGHTRCNKDAFVE
TRKLDFCTAGRRAPDKELPRQVIELGDSSGADIINSIKTTTGHLICANSS
NDELTFSGDEELHTCRLGESDQTPHAGYPISSVRTISERVLPSEEAQTMS
KPQSAENEVHCTAGSASFESSHQSHRWTLPAEQYKEECQAEQHLCSMDSS
SRQCSPNDHKENLFRCQDHRSPVVPAQRLNLSSAMVHEDPTLPPDPPEER
LVDGSPSYVEGAIESKEESEQGQSQEGRKETEQKRLSAQNAPVSIDSSNL
RDHGIAARSRSEMENQEQNIAKDGGGCSTVSGEAIYKPNTLTTGGYRVFC
EADRISREDIGVVYASTKSCGDEGRRGNGCDHKGHHVHCKIEEGVADRPG
KEDCRLEETSDEIETFYSLACSPRGRSRAKHEPPATRVAEAKQKFTGVPV
IPTTTNAVLRLNKSPGTRTRDSVKRLTKHPCGEGLTLGGRMRDVEVIDEQ
PKRASSPPLDEYPQSDAHFIKKRMTPKGCLVDDHRGDDPGYDSDGWEIRT
DVLAIAEEVFTSFERRFLPCLAAIASPASPGLKAETPENPVQRGKTNDVL
PPAIRRIMSEEMVRVLTLRRRDLHAVARQSPGLLNEAVEQAFLMLENAVS
TAATHSHALCNMGRLLEDRENPDEALLCFEEASAVDPASAEALCLRAGNL
QRRGDLVGATRHFERALVQGKFFGLACYGLSQVNAVQGKYAGAIGALVHW
LDEQNKQCSGSGEPDRASQAKGLVQLGDAYRGLGQDECAQRAYQRAIEMD
GGCSEAYFKLGSLLQAQGGRDAEALEAFGRAVNAAAGTATALHARAKGRR
STECDRREFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom