prot_F-serratus_M_contig1508.3523.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1508.3523.1
Unique Nameprot_F-serratus_M_contig1508.3523.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length215
Homology
BLAST of mRNA_F-serratus_M_contig1508.3523.1 vs. uniprot
Match: F0W6E8_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6E8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.670e-8
Identity = 35/112 (31.25%), Postives = 61/112 (54.46%), Query Frame = 0
Query:    1 MMEVDKLAADLHRLGDKSLTELRKCVIIVSGLSADFEMACRILENNPDGLNRAEIERIVGNQYNRLLRQQHDSKALSASRGTVTTNREKGKNRRFYNKFDGKCFNCGKKGHR 112
            MM+ DKL  ++  + D  L +    VI++  L  DF+   RILE+ P G++    +  +  ++ R+  ++    AL A+RG ++  + +        +F+GKCF CGK+GHR
Sbjct:    4 MMKFDKLTMEIAAMED-GLNDQEMIVILLGSLPVDFDPIVRILESMP-GIDLISAKGTLQREWERMQNRESSEVALQATRGRISKKKYQRHPGTLGEEFNGKCFQCGKRGHR 113          
BLAST of mRNA_F-serratus_M_contig1508.3523.1 vs. uniprot
Match: F0X0S7_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X0S7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.430e-7
Identity = 38/140 (27.14%), Postives = 70/140 (50.00%), Query Frame = 0
Query:    1 MMEVDKLAADLHRLGDKSLTELRKCVIIVSGLSADFEMACRILENNPDGLNRAEIERIVGNQYNRLLRQQHDSKALSASRGTVTTNREKGKNRRFYNKFDGKCFNCGKKGHRAHCRLCKSLEHRTRDYEERGAEKGAMLA 140
            MM+ DKL  ++  +GD  L +    VI++  L  +F+   RILEN   G++    +     ++ R+  ++     L  +RG ++  + +        +F+GKCF CGK+GHR +   C++   + R   + G +  A +A
Sbjct:    4 MMKFDKLTMEMAAMGD-GLNDQEMLVILLGSLPLNFDPIVRILENIT-GIDLMSAKETPRREWGRIKNRESSEVTLEVTRGRISKKKYQRNPGTVGEEFNGKCFQCGKRGHRKY--ECRTRLQQVRPSSKPGDDSHAFMA 139          
BLAST of mRNA_F-serratus_M_contig1508.3523.1 vs. uniprot
Match: A0A5S6QG42_TRIMR (Uncharacterized protein n=5 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QG42_TRIMR)

HSP 1 Score: 55.5 bits (132), Expect = 2.160e-5
Identity = 64/218 (29.36%), Postives = 94/218 (43.12%), Query Frame = 0
Query:    4 VDKLAADLHRLGDKSLTELRKCVIIVSGLSADFEMACRILENNP-DGLNRAEI-ERIVGNQYNRLLRQQHDSKALSASRGTVTTNREKGKNRRFYNKFDGKCFNCGKKGHRAHCRLCKS-LEHRTRDYEERGAEKGAMLAKLTVPVVPGVRAVAAMVVTACSVKKE----EWESDSGATFHMSHTRPGMFDNKKASPG-TNVEIADGNVLPVDGFGRI 213
            ++ L  +L  +GD S+++    + I+ GLS D++     + N P      A + +R++   Y R       + AL+A   T    R   KN   + K D  C+ C KKGH A  R CKS ++H+ +     G  K  M                A +  +C          W  DSGAT HMS         K  SP  T V+IADG+VLP+   G +
Sbjct:  134 MNHLVTELISVGD-SVSDGDVAMTILCGLSDDWDNVVSAICNLPATEFTCATVKQRLLAESYRRNDSSSQGTNALAAKATTFA--RPAIKN---FGKADAICYKCSKKGHYA--RECKSKVDHKRKQKNSPGDGKLQMSH--------------ASLYASCGAVSNGFAGAWVIDSGATHHMSPNEEYFTKWKAKSPANTQVQIADGSVLPIANAGTV 329          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1508.3523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
F0W6E8_9STRA1.670e-831.25Putative polyprotein n=1 Tax=Albugo laibachii Nc14... [more]
F0X0S7_9STRA3.430e-727.14Putative polyprotein n=1 Tax=Albugo laibachii Nc14... [more]
A0A5S6QG42_TRIMR2.160e-529.36Uncharacterized protein n=5 Tax=Trichuris muris Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 101..113
e-value: 0.0016
score: 18.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1508contigF-serratus_M_contig1508:197464..198228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1508.3523.1mRNA_F-serratus_M_contig1508.3523.1Fucus serratus malemRNAF-serratus_M_contig1508 197458..198228 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1508.3523.1 ID=prot_F-serratus_M_contig1508.3523.1|Name=mRNA_F-serratus_M_contig1508.3523.1|organism=Fucus serratus male|type=polypeptide|length=215bp
MMEVDKLAADLHRLGDKSLTELRKCVIIVSGLSADFEMACRILENNPDGL
NRAEIERIVGNQYNRLLRQQHDSKALSASRGTVTTNREKGKNRRFYNKFD
GKCFNCGKKGHRAHCRLCKSLEHRTRDYEERGAEKGAMLAKLTVPVVPGV
RAVAAMVVTACSVKKEEWESDSGATFHMSHTRPGMFDNKKASPGTNVEIA
DGNVLPVDGFGRIEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC