prot_F-serratus_M_contig150.3481.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig150.3481.1
Unique Nameprot_F-serratus_M_contig150.3481.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length351
Homology
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BLAST of mRNA_F-serratus_M_contig150.3481.1 vs. uniprot
Match: D7FIN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIN9_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.000e-67
Identity = 138/273 (50.55%), Postives = 169/273 (61.90%), Query Frame = 0 
Query:   97 SVRVIRGGRLHGSR----EDDNNPSDRVGADEQGRSDTSNNPAVEK-IEQVAADLRAKRDDIVENVRAQGEAMAEGLKVKQEKLADEVLRDRSPEAFGGLAGH-HTYDSATAGLDVANRRAFFLGIRRAVLLVQVVELILACSWQVGFPYGGVAGFLAG----DYDQAAPASEWVGCLRD--------ARGRLGIAVAAALGQAALYTALMVFFGCDRVVLRAVRVTGWEHGAAAAWSLYRAFGAAGG-LDYLAASAWLSGIAFLCVYFGRQL 350
            S   +RGG  HGS        +N S+ VG D  G        AV+  I+++AADLRA RD                      K+ DEVLR+RSPEAFG L GH  +YDSATAG+DVANRR+FFLGIRR +LLVQVVEL+ AC WQ  FP+GG+AGF+      + +   P +  +  LRD         RG LG+A+AA L Q ++YT L+V+FGCDRVVLR VRVT WEHGAAA W+L R     GG L +L A AWL+G+AFLC YFGRQL
Sbjct:    6 SAWTVRGGYKHGSSATASNSGSNSSNSVGQD--GFPPRGETTAVDSNIDKLAADLRATRDHXXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAASTMNGEGGTPNTAVLDTLRDIVAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRLLTGPGGKLTHLVACAWLAGMAFLCAYFGRQL 276
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig150.3481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIN9_ECTSI1.000e-6750.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..156
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 327..347
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 348..350
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 295..326
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.619
NoneNo IPR availableTMHMMTMhelixcoord: 271..293
NoneNo IPR availableTMHMMTMhelixcoord: 325..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig150contigF-serratus_M_contig150:177850..185053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig150.3481.1mRNA_F-serratus_M_contig150.3481.1Fucus serratus malemRNAF-serratus_M_contig150 177476..185071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig150.3481.1 ID=prot_F-serratus_M_contig150.3481.1|Name=mRNA_F-serratus_M_contig150.3481.1|organism=Fucus serratus male|type=polypeptide|length=351bp
MSSTSRPNRVELISRPMWPLPLCCVALLLTTQAATVGVSHSTCNTDRCDP
PNCQLHPDRPSRPWPQARQCRHQAHRLRVLPTQRQSTDWLSTPLGRSVRV
IRGGRLHGSREDDNNPSDRVGADEQGRSDTSNNPAVEKIEQVAADLRAKR
DDIVENVRAQGEAMAEGLKVKQEKLADEVLRDRSPEAFGGLAGHHTYDSA
TAGLDVANRRAFFLGIRRAVLLVQVVELILACSWQVGFPYGGVAGFLAGD
YDQAAPASEWVGCLRDARGRLGIAVAAALGQAALYTALMVFFGCDRVVLR
AVRVTGWEHGAAAAWSLYRAFGAAGGLDYLAASAWLSGIAFLCVYFGRQL
*
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