prot_F-serratus_M_contig1494.3404.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1494.3404.1
Unique Nameprot_F-serratus_M_contig1494.3404.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length386
Homology
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BLAST of mRNA_F-serratus_M_contig1494.3404.1 vs. uniprot
Match: D7FUM4_ECTSI (HTH_OrfB_IS605 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM4_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 2.760e-121
Identity = 242/409 (59.17%), Postives = 268/409 (65.53%), Query Frame = 0 
Query:    3 SEQKQQLPSLTDFWKEPWTASTWGAWSSQNPAAQGLQPSSWMYTRHTANHDHSDSTDFDFGSYSSDCTSFS-ASSSGIPSPGASPPTLRQRWSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPT-----MAPXPGLSPERYGHPPL------------------NPTAHSLPAPSRTLSSXXXXXXXSSIESESS-ALGLYGGSCSGAGASS-----AFQIAGYRTVELLPTAQQRQTLQKWFGVVRWTHNRAVDALRVDPSSSAAELRAAVAKAEAEHEWAAAVPLAIRDATVAQLVGALHLAQRSAEVAAAATGESVMAEPIGTAAQNKALKYRTRKDRLEQVVLRADGFQFGIPYPEYFGYAPLASSAPIPDRVQTDAILVRSTERFYLCI 381
            S ++QQ   L DFW+EPW   TW +  SQNPAAQGLQPS WMYT H    D   S DFD GS      SFS ASS   PSPG SPP    +W                            XXXXXXXXXX      A       M P PGL+ ER+ HP                       + SL A   T+ +       SS+ES++S AL LYGG+             AFQI GY+T+ELLPTAQQRQTLQKWFGVVRW HNRAVDALRVD S SA  LRAAVA++E+EHEWAAAVPLAIRDATVAQLVGALHLAQRSAEVAAAATGE+VMAEP+GTAAQNKALKYRTRKDRLEQ+VLRADGFQ+GIPYP+YFGYAPLASS PIPDR+ +DAILVRSTERFYLCI
Sbjct:    2 STEQQQARGLDDFWQEPWAQDTWVSTISQNPAAQGLQPSGWMYTSHPGKQD---SLDFDLGS------SFSQASSEDPPSPG-SPPLNHGQWKRGSTASTASSCGSISVSGGAGHQPIEHXXXXXXXXXXAPIASTASLSSTLPMTPPPGLAHERFVHPAAAXXXXXXXXXXXXXXPHXXXXSQSLLA---TMGARSGTSRSSSVESDTSPALSLYGGAXXXXXXXXXXXPCAFQILGYQTLELLPTAQQRQTLQKWFGVVRWIHNRAVDALRVDSSVSATSLRAAVAESESEHEWAAAVPLAIRDATVAQLVGALHLAQRSAEVAAAATGEAVMAEPLGTAAQNKALKYRTRKDRLEQIVLRADGFQYGIPYPDYFGYAPLASSVPIPDRLPSDAILVRSTERFYLCI 397
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1494.3404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUM4_ECTSI2.760e-12159.17HTH_OrfB_IS605 domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021027Transposase, putative, helix-turn-helix domainPFAMPF12323HTH_OrfB_IS605coord: 213..241
e-value: 9.9E-7
score: 28.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1494contigF-serratus_M_contig1494:175531..179702 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1494.3404.1mRNA_F-serratus_M_contig1494.3404.1Fucus serratus malemRNAF-serratus_M_contig1494 175531..179702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1494.3404.1 ID=prot_F-serratus_M_contig1494.3404.1|Name=mRNA_F-serratus_M_contig1494.3404.1|organism=Fucus serratus male|type=polypeptide|length=386bp
MTSEQKQQLPSLTDFWKEPWTASTWGAWSSQNPAAQGLQPSSWMYTRHTA
NHDHSDSTDFDFGSYSSDCTSFSASSSGIPSPGASPPTLRQRWSSSSNNG
LVDYHHHHPHHHHHHQQQHQQLRHLHGAARGASPPPPAPTMAPPPGLSPE
RYGHPPLNPTAHSLPAPSRTLSSRSVTSRSSSIESESSALGLYGGSCSGA
GASSAFQIAGYRTVELLPTAQQRQTLQKWFGVVRWTHNRAVDALRVDPSS
SAAELRAAVAKAEAEHEWAAAVPLAIRDATVAQLVGALHLAQRSAEVAAA
ATGESVMAEPIGTAAQNKALKYRTRKDRLEQVVLRADGFQFGIPYPEYFG
YAPLASSAPIPDRVQTDAILVRSTERFYLCIPDTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021027Transposase_put_HTH