prot_F-serratus_M_contig1491.3383.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1491.3383.1
Unique Name	prot_F-serratus_M_contig1491.3383.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	254

Homology

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BLAST of mRNA_F-serratus_M_contig1491.3383.1 vs. uniprot
Match: D7FKT9_ECTSI (Tim44 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT9_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 3.030e-101
Identity = 154/221 (69.68%), Postives = 172/221 (77.83%), Query Frame = 0

Query:   16 RVISSSRNVRGEVRSSGAIFDPYEYRGEGGDKALPPMMTGEGLKIRWGIMRGHLKSGVCAGIIQKHVPKFHASKFPPVANEVFKDFFEAHRKGDTRALAGLTTEELYATLKGELKQAKKDGGDRLAFRVLGFKRPTHVLQMREHRKKEISDKQGWGQVTCRLQSEREVVTVDANGREVRPADGEEAIKTDNVTIGTFEVFFGDDQKRWRLALLQELGEAPV 236
            R ISSS +  GEVRSSG IFDPY YRG GG K LPPMM+ EG++ R GIMR HLKSGVCAGIIQKHVP FH SKFPPVAN++FKDFFEAHRKGDTRALAGLTTEELYA+LKGE+K +K  G  R AFR++ FK PT VLQMR  RKK IS K+GWGQVTCRL SER+++ VDA G EV     E+A    NVT+G FE FFGD   RWRLAL+QE  EAP 
Sbjct:    9 RGISSSSSRLGEVRSSGGIFDPYVYRGAGG-KGLPPMMSSEGVRERLGIMRSHLKSGVCAGIIQKHVPDFHVSKFPPVANQIFKDFFEAHRKGDTRALAGLTTEELYASLKGEIKSSKSRGAQRAAFRLVDFKEPTTVLQMRVDRKKHISPKEGWGQVTCRLCSERQLLVVDAKGNEVEAKADEDATTAQNVTVGVFEAFFGDSAGRWRLALVQEFAEAPA 228

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BLAST of mRNA_F-serratus_M_contig1491.3383.1 vs. uniprot
Match: A0A835YW25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW25_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.070e-43
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 0

Query:   50 PPMMTGEGLKIRWGIMRGHLKSGVCAGIIQKHVPKFHASKFPPVANEVFKDFFEAHRKGDTRALAGLTTEELYATLKGEL-KQAKKDGGD---RLAFRVLGFKRPTHVLQMREHRKKEISDKQGWGQVTCRLQSEREVVTVDANGREVRPADGEEAIKTDNVTIGTFEVFFGDDQKRWRLALLQELG 232
            PP+ T  GLK R+ + +GH+KS     II+KHVP F    FPP+A++VF+ F +AHRKGD  +L  L TE L+  +K ++ +  +K G +   R AF++L    PT+VLQ+R   +K    K+GWGQ+T +  + RE++ VD  GREV+P  G   +  +++T+G  E+FF D    WRLA+L E+G
Sbjct:    5 PPVYTLAGLKHRFTVYKGHMKSSAAIAIIKKHVPGFSPKTFPPIADQVFQSFIDAHRKGDLPSLCNLATEGLHDNVKADVTRMGRKPGSEPKPRAAFKLLRMMEPTYVLQVRAAMEKGSGGKRGWGQMTVQYVTSREILAVDRRGREVQPPPGGNKV-VESITMGVLEIFFNDPAHTWRLAMLHEVG 190

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BLAST of mRNA_F-serratus_M_contig1491.3383.1 vs. uniprot
Match: A0A6H5K0Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z7_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.040e-19
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = 0

Query:   26 GEVRSSGAIFDPYEYRGEGGDKALPPMMTGEGLKIRWGIMRGHLKSGVCAGIIQKH 81
            GEVRSSG +FDPY YRG GG K LPPMM+ EG+K R GIMRGHLKSGVCAGIIQ H
Sbjct:   25 GEVRSSGGVFDPYVYRGAGG-KGLPPMMSSEGVKERLGIMRGHLKSGVCAGIIQVH 79

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1491.3383.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1491.3383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FKT9_ECTSI	3.030e-101	69.68	Tim44 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A835YW25_9STRA	2.070e-43	42.25	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5K0Z7_9PHAE	1.040e-19	78.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.240		coord: 71..237 e-value: 1.1E-20 score: 75.9
None	No IPR available	PANTHER	PTHR28554	FAMILY NOT NAMED	coord: 28..225
IPR007379	Tim44-like domain	PFAM	PF04280	Tim44	coord: 79..226 e-value: 8.5E-9 score: 35.7
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 78..229

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1491	contig	F-serratus_M_contig1491:216319..224801 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1491.3383.1	mRNA_F-serratus_M_contig1491.3383.1	Fucus serratus male	mRNA	F-serratus_M_contig1491 216243..225084 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1491.3383.1 ID=prot_F-serratus_M_contig1491.3383.1|Name=mRNA_F-serratus_M_contig1491.3383.1|organism=Fucus serratus male|type=polypeptide|length=254bp
MLARQRVGTVLSASSRVISSSRNVRGEVRSSGAIFDPYEYRGEGGDKALP
PMMTGEGLKIRWGIMRGHLKSGVCAGIIQKHVPKFHASKFPPVANEVFKD
FFEAHRKGDTRALAGLTTEELYATLKGELKQAKKDGGDRLAFRVLGFKRP
THVLQMREHRKKEISDKQGWGQVTCRLQSEREVVTVDANGREVRPADGEE
AIKTDNVTIGTFEVFFGDDQKRWRLALLQELGEAPVMSLKKAAKPASTTS
KAP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007379	Tim44-like_dom
IPR032710	NTF2-like_dom_sf