prot_F-serratus_M_contig1490.3375.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1490.3375.1
Unique Name	prot_F-serratus_M_contig1490.3375.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	168

Homology

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BLAST of mRNA_F-serratus_M_contig1490.3375.1 vs. uniprot
Match: D7FJF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJF0_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 1.970e-33
Identity = 75/162 (46.30%), Postives = 98/162 (60.49%), Query Frame = 0

Query:    5 SCCNWVEFWIMVLSFADVLTDFLYFDKLYDMDEVSQGVAFIVLPFAIFGLVGMLVGPSSKIGLITAVLLEDVPQIIATTAIEAYLVRGRIVLWTPVAKATYVFSILGLQQKFFKIGFAPSLR-----RTEANRERKPNPV--WVFFCSVMAVVA-SLLVAWG 158
            +CCN  E WI+ LS AD+L+DFLYF++LY  + V  GVAF VL FAI GL+  L GP S IG   ++  ED P II TTAI+AYL    +  W  VA  +YVFS+  +QQK  K+G   S+R     R E  R+ +  P   WV F   +A VA ++L+AW 
Sbjct:   11 NCCN--ETWILALSVADILSDFLYFEELYTENNVPDGVAFAVLGFAIVGLMSFLSGPFSDIGTAVSISFEDFPIIIITTAIQAYLAGADVREWHAVAIVSYVFSMFAMQQKVMKLGLVKSIRDILNPRAEEERQAEIGPCYWWVVFVRSLAAVAFTVLLAWA 170

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1490.3375.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1490.3375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FJF0_ECTSI	1.970e-33	46.30	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 167..167
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..40
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 139..166
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 60..138
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 41..59
None	No IPR available	TMHMM	TMhelix		coord: 139..161
None	No IPR available	TMHMM	TMhelix		coord: 7..29
None	No IPR available	TMHMM	TMhelix		coord: 39..61

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1490	contig	F-serratus_M_contig1490:185838..186341 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1490.3375.1	mRNA_F-serratus_M_contig1490.3375.1	Fucus serratus male	mRNA	F-serratus_M_contig1490 172911..187740 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1490.3375.1 ID=prot_F-serratus_M_contig1490.3375.1|Name=mRNA_F-serratus_M_contig1490.3375.1|organism=Fucus serratus male|type=polypeptide|length=168bp
MIDLSCCNWVEFWIMVLSFADVLTDFLYFDKLYDMDEVSQGVAFIVLPFA
IFGLVGMLVGPSSKIGLITAVLLEDVPQIIATTAIEAYLVRGRIVLWTPV
AKATYVFSILGLQQKFFKIGFAPSLRRTEANRERKPNPVWVFFCSVMAVV
ASLLVAWGVAVIVILVT*