prot_F-serratus_M_contig1479.3308.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1479.3308.1
Unique Nameprot_F-serratus_M_contig1479.3308.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length226
Homology
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BLAST of mRNA_F-serratus_M_contig1479.3308.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 8.320e-13
Identity = 38/87 (43.68%), Postives = 47/87 (54.02%), Query Frame = 0 
Query:    1 MAPCNIGEPSICSNGVFGVEAGGACCVTQCVTCGGVGCSRRAATAGLTADDCCIGRIMDSDVFCDVSGTAPCIIDGPCGPALTITLE 87
            M    +     CSNG  G+E  GACCV+ C TCGG GCS R   +GLT DDCC   I+     C  +G APC +DG   P+ +   E
Sbjct:   10 MLSVGVAAAQKCSNGFPGIEKSGACCVSDCGTCGGSGCSSR--ESGLTGDDCCTKNILKQGAPCSATGHAPCFLDGDSTPSKSTPTE 94
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BLAST of mRNA_F-serratus_M_contig1479.3308.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.070e-9
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 0 
Query:   11 ICSNGVFGVEAGGACCVTQCVTCGGVGCSRRAATAGLTADDCCIGRIMDSDVFCDVSGTAPCIID 75
            +CSNG+ GV++G ACC+ +CV CGG GC       GL AD+CC G I ++   C ++  APC++D
Sbjct:  891 VCSNGIPGVQSGFACCLAECVACGGSGCDEFG--GGLGADNCCEGNIEENGELCSITLQAPCVVD 953
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1479.3308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRN0_ECTSI8.320e-1343.68Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FJ68_ECTSI1.070e-946.15WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1479contigF-serratus_M_contig1479:197732..199731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1479.3308.1mRNA_F-serratus_M_contig1479.3308.1Fucus serratus malemRNAF-serratus_M_contig1479 197655..199914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1479.3308.1 ID=prot_F-serratus_M_contig1479.3308.1|Name=mRNA_F-serratus_M_contig1479.3308.1|organism=Fucus serratus male|type=polypeptide|length=226bp
MAPCNIGEPSICSNGVFGVEAGGACCVTQCVTCGGVGCSRRAATAGLTAD
DCCIGRIMDSDVFCDVSGTAPCIIDGPCGPALTITLEWSEPDSDLDLYVT
EPDGSVVSFASMVGSVGFLDMDVRSGPGIETYTIFRFLDPNSLDIIGNYQ
YQARLFSGPTDTVFTLSVSLIEEEIFVDIGDFKEFSSTDFLTVPVNEYDP
SCEDGTDAFELDSRDSTSSPEDKLP*
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