prot_F-serratus_M_contig1477.3296.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1477.3296.1
Unique Nameprot_F-serratus_M_contig1477.3296.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length907
Homology
BLAST of mRNA_F-serratus_M_contig1477.3296.1 vs. uniprot
Match: D8LDC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC8_ECTSI)

HSP 1 Score: 719 bits (1855), Expect = 2.490e-247
Identity = 386/725 (53.24%), Postives = 500/725 (68.97%), Query Frame = 0
Query:   10 KAATPLGLLVVALAPLQTEGSIFDTPADELGEDDFAAYGNEVLVASMGLGIGPFALFGVLAFVAMLAMCCRCNRLHREDLAIAQAEGNNDGKGLDAMYEIEDYENRISKHRKILWILSFIIFLSYIFCAGYAYNGAKSSKATFDDIFDGTDVLLTEIQTALCAENGAKECADQSVGDFLLNIATEVVDQFEGIVIFLSSLTTVVLPLYWVSANLTTAATVINGTERAALNLNTSITNVNLIFTGDGNVADISGGSTLPTLDDSIIEDVAEGRRAIAAAKTLTGDSTVEVAEQLSGSSSSITRIKYQLDDVHGNEIEEDEDLRNTTLEAVYE-VLVPLRDTARDVYDFQNNELVDAREIVDAFLELSVQAVGAIIFLPGVVLLLTAICSGICQSSKPLYLNMCFVFLSQILFCLMAGVFLAVSKINGDVCDHHLQLIEINFQEEYNTTVKDTVIFFNFDKLYLILKCDGVSGDTPTSTNNFVGILGAEQACRVFNMSKMLKASSNMIKDNTDALASPKSTVVQAQGELSPLNDFVDMEIGDDEEIEESSDEIDDLLNEIPPTPFNWDSRADQDALDDFYLKNVTEFSWNNATTGDELYRSLLGEINKIISEMEPGVIEQSD-FDDIDYPYNFTLARNLTWMTVCAETSNFFPDPADPLTSNLLGIIIYSDEDQWGYLCGNVSAYANITVKLEDLIFENGETRLDLEEVSGHLDDIGGNLTAINGYQ 732
            + A  L L  +A+  + T+GS+FDTPAD+L ++D+  YG EV VA+ GLGIG    FG+LAF+ MLAMCCRC RLHR DLAIA+AEG+NDGKGLD MYEIEDYE+ ISKHRKILW+ SFIIFL Y+FCAGYAYNGA+++ ++F  IFDGTDVLLT  Q ALCAENG+ +CAD SVGDF+L I+  ++D+ EG+V F+SSL+ V  PL  VSANL TA  V++ TE A +N+N SIT+VN I TGDG VA++  G T+  +D  ++ D+ +GR A+  A  LT  S++E+AEQL+G+ S+ITRIKYQLDDVHGNEI  DED+RN TL  V + VL P+RD   D+YD QN+++ + RE ++ +L+ +VQAV  IIFLPGV+L LT++CSG+CQSSK                            INGD+CDHH+ LIE N  E +NTTV+D  I  +F K+  IL C G +GDTPT +NNFV IL  +Q   +FN+S  LK +S++I DN+  LA PK +V+ AQ EL PL+DFV+ +   D ++ E SDEIDDLL ++PP+P +WD R  QD++D FYL NV+ +SWNNA++G+  YR  L  +N +IS M PG+I   D F DI  PYNF  ARNLT  TVCA  S F+P       SN   I IY+ +D W  LC NV+AY   T KLE LI EN E R DLE +   + +I GN+T I   Q
Sbjct:   13 RGAAMLCLPTLAMTLVVTKGSVFDTPADDLEQEDYIDYGQEVGVATAGLGIGLSIFFGLLAFLGMLAMCCRCKRLHRADLAIAEAEGDNDGKGLDDMYEIEDYEDNISKHRKILWLFSFIIFLGYLFCAGYAYNGAETTDSSFGSIFDGTDVLLTRAQEALCAENGSADCADGSVGDFMLEISVALIDRLEGVVDFISSLSAVTAPLLVVSANLGTATGVVDTTEMAVININNSITSVNAIITGDGPVAELMDGETIANIDGDVLHDIQDGRDALEQATELTESSSLEIAEQLTGNESAITRIKYQLDDVHGNEILGDEDIRNATLTTVLDDVLQPMRDLTVDIYDVQNDDIPEVRENIEVYLDQAVQAVAGIIFLPGVILFLTSLCSGVCQSSK----------------------------INGDLCDHHMALIEANLPE-FNTTVQDVEILVDFPKVEKILTCSGDAGDTPTDSNNFVDILEIQQ---IFNISSTLKEASSLITDNSALLAEPKDSVLDAQSELGPLDDFVETDFVGDIDMSELSDEIDDLLEDMPPSPLDWDDRDHQDSVDSFYLNNVSGYSWNNASSGNITYRGQLENVNWLISLMVPGIIGVEDAFLDIKDPYNFEQARNLTNETVCATDSPFYPADGQDRYSNSENIEIYAFDDHWDQLCRNVTAYYETTKKLETLIEENDEARQDLEGIQYEMGNIEGNITVITDQQ 705          
BLAST of mRNA_F-serratus_M_contig1477.3296.1 vs. uniprot
Match: A0A835ZAU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU7_9STRA)

HSP 1 Score: 167 bits (422), Expect = 4.800e-39
Identity = 150/540 (27.78%), Postives = 239/540 (44.26%), Query Frame = 0
Query:  115 RISKHRKILWILSFIIFLSYIFCAGYAYNGAKSSKATFDDIFDGTDVLLTEIQTALCAENGAKECADQSVGDFLLNIATEVVDQFEGIVIFLSSLTTVVLPLYWVSANLTTA--------------ATVINGTERAALNLN------------TSITNVNLIFTGDGNVADISGGST-------LP--TLDDSIIEDVAEGRRAIAAAKTLTGDSTVEVAEQLSGSSSSITRIKYQLDDVHGNEIEEDEDLRNTTLEAVYEVLVPLRDTARDVYDFQNNELVDAREIVDAFLELSVQAVGAIIFLPGVVLLLTAICSGICQSSKPLYLNMCFVFLSQILFCLMAGVFLAVSKINGDVCDHHLQLIEINFQEEYNTTVKDTVIFFNFDKLYLILKCDGVSGDTPTSTNNFVGILGAEQACRVFNMSKMLKASSNMIKDNTDALASPKSTVVQAQGELSPLNDFVDMEIGDDEEIEESSDEIDDLLNEIPPTPFNWDSRADQDALDDFYLKNVTEFSWNNATTGDELYRSLLGEINKIISEM 619
            R ++ R+ LW  +  + ++Y+ C   +Y+ A+ +  T DD +DGT   LT++Q ALC+     +CAD SVGD++L + T +V  F   V ++  L+ V  P   ++                    AT      +  L++             T  T +  I T  GN  D             +P  T DD +   VA     I A    T  +     + +   +S + R+ YQLDDV  NE+    DLR   L A   +   + + +  VY FQ      A + V       V AV  I+ LPG+VLL TA C+G+C++ KP YL M F + +Q  FCL+AG+ L + K+NGDVC  H ++I  N   +    V+          +   L+C GV  + PT+TNN V I G  +A   F+MS  L  +S  +      + S  ++      +L  L+ +             ++  +D  L ++PP PF+ D+   Q AL +        F W   T    LY + L  ++ +++ +
Sbjct:  169 RPARCRRYLWGATLALIIAYVACGAASYSAARKTLNTVDDAYDGTSAFLTDVQLALCSTGSDAKCADGSVGDYVLAVQTTMVGTFAAAVAWIDQLSGVQAPFDAMAMQTGVMSDTQVRARGGPHVRATPDAPQRKGPLSITPLLPPPHARAQATEATLIPDIGTYAGNWTDFFATYARYDFTFAVPNVTADDELR--VAADAVTIGATAAATQAANQTTYDIMVSPTSDLMRLSYQLDDVKNNELG-GPDLRGAALAATSALSTRIVNASARVYAFQTGPAETAYDTVSRHFSTGVLAVSGIVLLPGLVLLATAACAGLCRTPKPFYLGMAFGYWTQGAFCLVAGLALLLMKLNGDVCKQHKEIIVTNL--DVTVPVRGVTSTPLGVGIVGALECTGVYPEAPTATNNLVDIFGIGEA---FDMSGPLTDASGTVTGLAPTILSIITSTADITTQLDQLDPYAYTGARAQYVGATATAALDARLAQLPPEPFDRDN-VQQAALFETEYLQTANFRWATVTNTLPLYTTALNNLSAMLASV 699          
BLAST of mRNA_F-serratus_M_contig1477.3296.1 vs. uniprot
Match: A0A836CLF9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF9_9STRA)

HSP 1 Score: 166 bits (421), Expect = 7.690e-39
Identity = 110/407 (27.03%), Postives = 185/407 (45.45%), Query Frame = 0
Query:   42 DDFAAYGNEVLVASMGLGIGPFALFGVLAFVAMLAMCCRCNRLHREDLAIAQAEGNNDGKGLDAMYEIEDYENRISKHRKILWILSFIIFLSYIFCAGYAYNGAKSSKATFDDIFDGTDVLLTEIQTALCAENGAKECADQSVGDFLLNIATEVVDQFEGIVIFLSSLTTVVLPLYWVSANLTTAATVINGTERAALNLNTSITNVNLIFTGDGNVADISGGSTLPTLDDSIIEDVAEGRRAIAAAKTLTGDSTVEVAEQLSGSSSSITRIKYQLDDVHGNEIEEDEDLRNTTLEAVYEVLVPLRDTARDVYDFQNNELVDAREIVDAFLELSVQAVGAIIFLPGVVLLLTAICSGICQSSKPLYLNMCFVFLSQILFCLMAGVFLAVSKINGDVCDHHLQLIEINF 448
            + + AYG  V   + G GI    + G+L  +  +  CCRC  L R D  I + +G +D   +           R++K RK+LW+ + ++ + Y  CAG AY  A S+   F + +DG D    ++Q A+CA++GA+EC D+S+G FL  +         G   FL +              +T+  T+                     +  +G   DI   ++               +  + A+ T                      +  ++D  HGNE++   DLR      +   L  LR+  R +Y +Q    VD  +  + +++ +  A G I+FLPG+VL+L A C+ +C++ +PLYLNM FV+  Q  +CL+ G+FL ++ +N D+CD H ++I   F
Sbjct:   27 EQWKAYGATVSEHTAGFGIALMFVLGLLMSILAIVFCCRCRSLRRIDREIGEGKGFHDQAAI---------AYRVTKQRKLLWVGTVMLVVGYAACAGVAYEKALSTDVAFGNAYDGADKFALDLQKAVCAQDGARECEDKSLGAFLEAVYGATTAVLNGTAAFLGT----------AGITMTSNTTLYGMLTCTPXXXXXXXXXXXXRWQSEGRPRDIERYASXXXXXXXXXXXXXAMQGPLGASATF---------------------VASEIDAEHGNEVDGVPDLREGVTVVLDATLTQLRNFTRTIYKYQTGAAVDVDDAFNQWIKPAAAAAGGIVFLPGIVLVLLAFCTAMCKNPRPLYLNMAFVYKVQGFYCLLGGLFLTLAYVNSDLCDQHKEIIVEQF 393          
BLAST of mRNA_F-serratus_M_contig1477.3296.1 vs. uniprot
Match: D8LDC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC9_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 5.340e-12
Identity = 44/88 (50.00%), Postives = 48/88 (54.55%), Query Frame = 0
Query:  820 MFLSFCVQGCYGPSMRKRPRHTA-DPDGSKVKPTATAAGETRELNKVAGNKTGLSIVVNEEMALNTTADESKLPTPHSPTPLVGDSGF 906
            MFLSFC+QGCYGPSMRKRPR  A D DG K +                               LN TAD + LPTPHSPTPLVG+SGF
Sbjct:    1 MFLSFCIQGCYGPSMRKRPRGPAGDFDGGKAR-------------------------------LNDTADNN-LPTPHSPTPLVGNSGF 56          
BLAST of mRNA_F-serratus_M_contig1477.3296.1 vs. uniprot
Match: A0A835ZCZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.700e-10
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0
Query:  763 LATDIESLNDHFMAASSYTMCGYIGTFYEDVYLDAMCTDLQGNVEAVAGPALCVVILMFLSFCVQGCYGPSMRKRP 838
            LA  I ++N  FM A +Y+MCG+IG FY+ VYL A+C   QGN+  +A P L V  LM ++F +     P+MR RP
Sbjct:   71 LAASIVAVNGVFMKADAYSMCGFIGDFYQSVYLGAVCEGFQGNLRDIAVPILFVACLMLVAFVLYAWLAPAMRARP 146          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1477.3296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LDC8_ECTSI2.490e-24753.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAU7_9STRA4.800e-3927.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLF9_9STRA7.690e-3927.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LDC9_ECTSI5.340e-1250.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCZ2_9STRA2.700e-1046.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 753..773
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 377..398
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 430..808
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 831..906
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 809..830
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 405..429
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 399..404
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..142
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..376
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..29
score: 0.502
NoneNo IPR availableTMHMMTMhelixcoord: 376..398
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 405..427
NoneNo IPR availableTMHMMTMhelixcoord: 808..830
NoneNo IPR availableTMHMMTMhelixcoord: 12..31
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 58..519

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1477contigF-serratus_M_contig1477:145725..169931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1477.3296.1mRNA_F-serratus_M_contig1477.3296.1Fucus serratus malemRNAF-serratus_M_contig1477 144337..171514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1477.3296.1 ID=prot_F-serratus_M_contig1477.3296.1|Name=mRNA_F-serratus_M_contig1477.3296.1|organism=Fucus serratus male|type=polypeptide|length=907bp
MLRRRGMDCKAATPLGLLVVALAPLQTEGSIFDTPADELGEDDFAAYGNE
VLVASMGLGIGPFALFGVLAFVAMLAMCCRCNRLHREDLAIAQAEGNNDG
KGLDAMYEIEDYENRISKHRKILWILSFIIFLSYIFCAGYAYNGAKSSKA
TFDDIFDGTDVLLTEIQTALCAENGAKECADQSVGDFLLNIATEVVDQFE
GIVIFLSSLTTVVLPLYWVSANLTTAATVINGTERAALNLNTSITNVNLI
FTGDGNVADISGGSTLPTLDDSIIEDVAEGRRAIAAAKTLTGDSTVEVAE
QLSGSSSSITRIKYQLDDVHGNEIEEDEDLRNTTLEAVYEVLVPLRDTAR
DVYDFQNNELVDAREIVDAFLELSVQAVGAIIFLPGVVLLLTAICSGICQ
SSKPLYLNMCFVFLSQILFCLMAGVFLAVSKINGDVCDHHLQLIEINFQE
EYNTTVKDTVIFFNFDKLYLILKCDGVSGDTPTSTNNFVGILGAEQACRV
FNMSKMLKASSNMIKDNTDALASPKSTVVQAQGELSPLNDFVDMEIGDDE
EIEESSDEIDDLLNEIPPTPFNWDSRADQDALDDFYLKNVTEFSWNNATT
GDELYRSLLGEINKIISEMEPGVIEQSDFDDIDYPYNFTLARNLTWMTVC
AETSNFFPDPADPLTSNLLGIIIYSDEDQWGYLCGNVSAYANITVKLEDL
IFENGETRLDLEEVSGHLDDIGGNLTAINGYQVQMGLLRDDMNDSLIHLI
EKLDELGGDLNNLATDIESLNDHFMAASSYTMCGYIGTFYEDVYLDAMCT
DLQGNVEAVAGPALCVVILMFLSFCVQGCYGPSMRKRPRHTADPDGSKVK
PTATAAGETRELNKVAGNKTGLSIVVNEEMALNTTADESKLPTPHSPTPL
VGDSGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety