prot_F-serratus_M_contig1435.3110.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1435.3110.1
Unique Nameprot_F-serratus_M_contig1435.3110.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length142
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1435.3110.1 vs. uniprot
Match: A0A6H5L4Q1_9PHAE (Cysteine-rich DPF motif domain-containing protein 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q1_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.870e-31
Identity = 55/78 (70.51%), Postives = 62/78 (79.49%), Query Frame = 0 
Query:   30 MEDVFCMMDPFSGGVQGEGGDGALRRCLPTVLGGTCANCSRSVCARCSLFYAVRLCGQCAREHKTSLPKEVWRMVDAT 107
            MEDV+CM DPFS G  G G  G  R+CLPTV+GGTCA CS+ VCA+CSLFYAVRLCG CAR HK SLP E+ R+VDAT
Sbjct:    1 MEDVYCMRDPFSVGGAGGGATGENRKCLPTVVGGTCAVCSKDVCAQCSLFYAVRLCGHCARAHKASLPSELHRIVDAT 78
[Close]
BLAST of mRNA_F-serratus_M_contig1435.3110.1 vs. uniprot
Match: A0A7S3D3U6_9EUKA (Cysteine-rich DPF motif domain-containing protein 1 n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D3U6_9EUKA)

HSP 1 Score: 77.8 bits (190), Expect = 6.850e-16
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 0 
Query:    3 FTCSLCRETFRVDYHGRKPPFCPELVFMEDVFCMMDPF-SGGVQGEGGDGALRRCLPTVLGGTCANCSRSVCAR--CSLFYAVRLCGQCAREHKTSLPKEV 100
            FTCS+C + +  +Y G+KPPF  ++V++EDV+ + DPF S   +GE             +GG C+ C   VCA   CSLFY  R C  CAR+     PKE+
Sbjct:    6 FTCSICMQDYPFEYFGKKPPFQNDVVYVEDVYVLRDPFHSLHSKGE---------RVVCMGGRCSLCLSPVCASSSCSLFYTKRFCSTCARKEVEEFPKEL 97
[Close]
BLAST of mRNA_F-serratus_M_contig1435.3110.1 vs. uniprot
Match: UPI001069289D (cysteine-rich DPF motif domain-containing protein 1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069289D)

HSP 1 Score: 72.0 bits (175), Expect = 1.190e-13
Identity = 36/106 (33.96%), Postives = 54/106 (50.94%), Query Frame = 0 
Query:    1 MSFTCSLCRETFRVDYHGRKPPFCPELVFMEDVFCMMDPFSGGVQGEGGDGALRRCLPTVLGGTCANCSRSVCA--RCSLFYAVRLCGQCAREHKTSLPKEVWRMV 104
            M F C  C  +   DY G++PPFC E++ +E V+ + DPF+            R     +LGG CA C   VC   +CS+FY+ R C  C+ ++    P E+ + V
Sbjct:    8 MVFQCKNCNFSTHYDYFGKQPPFCKEIILLESVYVIKDPFT------------RETGIVILGGHCALCHTEVCCDQKCSVFYSKRFCIPCSMKYFKEFPAEIQKDV 101
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1435.3110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4Q1_9PHAE1.870e-3170.51Cysteine-rich DPF motif domain-containing protein ... [more]
A0A7S3D3U6_9EUKA6.850e-1640.59Cysteine-rich DPF motif domain-containing protein ... [more]
UPI001069289D1.190e-1333.96cysteine-rich DPF motif domain-containing protein ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018785Cysteine-rich domain, DPF-motifPRINTSPR01995UPF0595coord: 1..8
score: 30.77
coord: 79..100
score: 29.67
coord: 24..42
score: 33.8
IPR018785Cysteine-rich domain, DPF-motifPFAMPF10170C6_DPFcoord: 3..102
e-value: 1.5E-22
score: 79.8
IPR042426Cysteine-rich DPF motif domain-containing protein 1PANTHERPTHR31849FAMILY NOT NAMEDcoord: 2..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1435contigF-serratus_M_contig1435:6441..11144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1435.3110.1mRNA_F-serratus_M_contig1435.3110.1Fucus serratus malemRNAF-serratus_M_contig1435 6255..11837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1435.3110.1 ID=prot_F-serratus_M_contig1435.3110.1|Name=mRNA_F-serratus_M_contig1435.3110.1|organism=Fucus serratus male|type=polypeptide|length=142bp
MSFTCSLCRETFRVDYHGRKPPFCPELVFMEDVFCMMDPFSGGVQGEGGD
GALRRCLPTVLGGTCANCSRSVCARCSLFYAVRLCGQCAREHKTSLPKEV
WRMVDATEQRWSETKPLVITSGSGVSSPAGVIDNPTQPIMK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018785Cys-rich_DPF
IPR042426CDPF1