prot_F-serratus_M_contig1433.3105.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1433.3105.1
Unique Nameprot_F-serratus_M_contig1433.3105.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length202
Homology
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BLAST of mRNA_F-serratus_M_contig1433.3105.1 vs. uniprot
Match: A0A6H5JAB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAB6_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.730e-16
Identity = 43/122 (35.25%), Postives = 75/122 (61.48%), Query Frame = 0 
Query:   40 TVSLSQYVRIDANGQPNASPEHTFSQVTTSGSHTLSLNSFKDKTHDGALLFVTFNVNKFSYQSIEEVDPVDLATLLGSAGGMWEIICAVFAVLFVASQGTRPDKKWVFRKTADERARNSAID 161
            T+ L+++V +  +    ++ E  ++QVTT+G  +L L++       GA+LF TF++N+FS+Q++EE DP    +++G+AGGM  I+ A+F +LF  S+   P + W F +    R R S +D
Sbjct:   31 TLELAEHVLLQPDEVTGSTTERGYTQVTTTGQQSLQLDNADP--FSGAILFATFSINEFSFQTVEEYDPSHYPSMVGAAGGMLAIVYALFGLLFAPSRSPGPRRIWRFSRR--RRKRRSKLD 148
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BLAST of mRNA_F-serratus_M_contig1433.3105.1 vs. uniprot
Match: D8LIE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE9_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.370e-14
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 0 
Query:    5 DKDIPLNETVVS-ARLPYERVNIIGT---KPFTLLSNDVTVSLSQYVRIDANGQPNASPEHTFSQVTTSGSHTLSLNSFKDKTHDGALLFVTFNVNKFSYQSIEEVDPVDLATLLGSAGGMWEIICAVFAVLFVASQGTRPDKKWVFRKTADERARNSAID 161
            D D+     V + ARLPY+R+++  T   +  T++SNDV                          VTT+G  +L  ++       GA+LF TF++N+FS+Q++EE+D  D  +++G+AGGM  I+ A+F +LF  S+   P + W F +    R R S +D
Sbjct:  140 DDDLDSENAVATLARLPYDRISVDATNASESITVVSNDV--------------------------VTTTGQQSLQFDNADP--FSGAILFATFSINEFSFQTVEELDTSDYVSMVGAAGGMLVIVYALFGLLFAPSRSPGPRRIWRFSQR--RRRRRSKLD 270
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1433.3105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAB6_9PHAE5.730e-1635.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIE9_ECTSI2.370e-1432.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1433contigF-serratus_M_contig1433:185016..189555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1433.3105.1mRNA_F-serratus_M_contig1433.3105.1Fucus serratus malemRNAF-serratus_M_contig1433 184547..189689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1433.3105.1 ID=prot_F-serratus_M_contig1433.3105.1|Name=mRNA_F-serratus_M_contig1433.3105.1|organism=Fucus serratus male|type=polypeptide|length=202bp
MFFVDKDIPLNETVVSARLPYERVNIIGTKPFTLLSNDVTVSLSQYVRID
ANGQPNASPEHTFSQVTTSGSHTLSLNSFKDKTHDGALLFVTFNVNKFSY
QSIEEVDPVDLATLLGSAGGMWEIICAVFAVLFVASQGTRPDKKWVFRKT
ADERARNSAIDHNQTGICSGCYCFHRVKARNLPRRRAPVTNFTDDDGATF
S*
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