prot_F-serratus_M_contig1430.3093.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1430.3093.1
Unique Nameprot_F-serratus_M_contig1430.3093.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length343
Homology
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: D8LPW4_ECTSI (Phosphatidate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW4_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.190e-107
Identity = 202/375 (53.87%), Postives = 247/375 (65.87%), Query Frame = 0
Query:    1 MGLRERFLTAGVAIPLALWAIFFDSFSCLALILGLQAICIHELVELLRKTRPARTLVAAGVHPF---SSSLFHTIGLAVCSASAFGGRDLSAIALSVGVAALVVRRLMLMRRHQRVALDAA----------------GDGASVIASGVFLLTLEASAVVWVVGGWSSLVGLRFSGPTGAADLVVLLAIVFNSDNGGLFAGSIFKALRRRHGQTLRA--------RPSLSASPSTAAKAA---PSADVPSILAIASPNKTWVGVTGAICLGTATALAAGPAIAFLSR---LVFSLEALSSEES----FSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYLAVV 338
            MGLRERFLTA VA+PLALWAIF D++ CL+L+L LQA+C+ E+ ELLR+TR AR + A GV      S+ LFH I   V   +AF GRD + IA+ VG+A +V RRL+LMR H   +  +A                   A V+ +GVFLL LE SA++W+V G SSLV LRF G  GAAD+V LLA+VFNSDNGGL AGS++K LRR+    L +        R S S +P  AA AA   P    P +L +ASP KTWVGVTG+I LGTATAL    A+ FL     L    E+L  EE     FS+G M+   LG+ GAG+C++G+VGDLWESLLKR A VKDSG +FPGHGGCLDRLDGVL AAPLYLAV+
Sbjct:    1 MGLRERFLTAAVALPLALWAIFHDAWLCLSLVLVLQAVCVQEVGELLRRTRAARAIAATGVGVALLGSTFLFHVIAETVSLITAFCGRDAAGIAMCVGMALIVARRLVLMRDHWVASKLSAEKPVGVSGGXXXXXXXXXXAGVMEAGVFLLALEISAMLWMVCGCSSLVALRFRGSRGAADVVFLLAVVFNSDNGGLLAGSMYKVLRRKRQLHLSSSELLQRHQRSSASQTPPAAAGAAEMTPGQKHPGLLTVASPGKTWVGVTGSIALGTATALTLEQALLFLLHEPLLSRVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLTAAPLYLAVL 375          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: A0A1F2UYU0_9BACT (Phosphatidate cytidylyltransferase n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b TaxID=1797193 RepID=A0A1F2UYU0_9BACT)

HSP 1 Score: 91.3 bits (225), Expect = 1.280e-17
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
Query:  257 LVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLY 334
            LV +   L+    + L +  P WLG+ G G+ + GI+GDL+ES+LKRAA VKDSG L PGHGG LDR+D +L AAP++
Sbjct:  176 LVIAPVFLAGAGYYWLPQYPPVWLGVLGVGIVIAGIIGDLFESMLKRAANVKDSGGLIPGHGGVLDRIDALLFAAPVF 253          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: T1BWM9_9ZZZZ (Phosphatidate cytidylyltransferase n=3 Tax=mine drainage metagenome TaxID=410659 RepID=T1BWM9_9ZZZZ)

HSP 1 Score: 89.4 bits (220), Expect = 8.450e-17
Identity = 51/111 (45.95%), Postives = 64/111 (57.66%), Query Frame = 0
Query:  225 SPNKTWVGVTGAICLGTATALAAGPAIAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYL 335
            SP KTW GV G + L    A+  G          ++L+    +    LG    AW+  T        I+GDL ESLLKR ATVKDSG +FPGHGG LDR+DGVLAAAP+++
Sbjct:  178 SPGKTWEGVAGGVALAVLLAVVFG----------YALDLRGLDLLLLLGV---AWVSTT------FSIIGDLSESLLKRQATVKDSGRMFPGHGGLLDRIDGVLAAAPVFV 269          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: H6SM93_PARPM (Phosphatidate cytidylyltransferase n=2 Tax=Pararhodospirillum photometricum TaxID=1084 RepID=H6SM93_PARPM)

HSP 1 Score: 89.4 bits (220), Expect = 1.130e-16
Identity = 49/118 (41.53%), Postives = 65/118 (55.08%), Query Frame = 0
Query:  225 SPNKTWVGVTGAICLGTATALAAGPAIAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYLAVVGVLR 342
            SP KTW G+ G    G A+A  AG  + F++                 G  AP W+ + G G+ V+   GDL+ES +KR   VKDS  + PGHGG LDR+DG+LAAAPL   +V +L 
Sbjct:  193 SPRKTWSGLLG----GVASAFLAGGVLLFVT-----------------GIDAPLWVLVLGPGLAVISQAGDLFESFVKRRFNVKDSSQIIPGHGGVLDRMDGLLAAAPLVALIVALLE 289          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: A0A2G2I7Y5_9GAMM (Phosphatidate cytidylyltransferase n=1 Tax=Methylophaga sp. TaxID=2024840 RepID=A0A2G2I7Y5_9GAMM)

HSP 1 Score: 88.6 bits (218), Expect = 1.450e-16
Identity = 50/112 (44.64%), Postives = 69/112 (61.61%), Query Frame = 0
Query:  225 SPNKTWVGVTGAICLGTATALAAGPAIAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYLA 336
            SPNKTW GV GA+ LG                L++++ A +   S SLG ++  WL ++   + ++ IVGDL+ESL KRA  +KDSG L PGHGG LDR+D +LAA P++ A
Sbjct:  171 SPNKTWEGVAGAVVLG----------------LIWAVIAYAINLSGSLGLIS--WLVLSLVAL-LISIVGDLFESLFKRAHNIKDSGNLLPGHGGILDRIDSLLAAVPVFTA 263          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: A0A1K1NSS8_9GAMM (Phosphatidate cytidylyltransferase n=2 Tax=unclassified Luteibacter TaxID=2620188 RepID=A0A1K1NSS8_9GAMM)

HSP 1 Score: 88.2 bits (217), Expect = 2.020e-16
Identity = 54/112 (48.21%), Postives = 66/112 (58.93%), Query Frame = 0
Query:  225 SPNKTWVGVTGAICLGTATALAAGPAIAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYLA 336
            SP KTW GV GA+         AG  +AFL   +     L    ++ L  M    LG+   G+ V   VGDL+ESL+KR A VKDSGALFPGHGG LDRLD V AA P+++A
Sbjct:  172 SPGKTWAGVYGAVM--------AGGLVAFLGGYL-----LGVRGTWPLCGMVV--LGVATVGIAV---VGDLFESLMKRHAAVKDSGALFPGHGGLLDRLDSVFAALPVFVA 265          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: UPI00066FC107 (phosphatidate cytidylyltransferase n=1 Tax=Frateuria defendens TaxID=2219559 RepID=UPI00066FC107)

HSP 1 Score: 88.2 bits (217), Expect = 2.020e-16
Identity = 52/110 (47.27%), Postives = 58/110 (52.73%), Query Frame = 0
Query:  225 SPNKTWVGVTGAICLGTATALAAGPAIAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLY 334
            SPNKTW GV GA+  G A  LA G  +      +F L                A L +   G     IVGDL ESL KR A VKDSG LFPGHGG LDRLD V AA P++
Sbjct:  173 SPNKTWAGVYGALAAGVAVVLAGGWLLGVRGGQLFGL----------------ALLAVVAVGAS---IVGDLLESLFKRHAQVKDSGTLFPGHGGLLDRLDSVFAALPVF 263          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: A0A5C8KR11_9GAMM (Phosphatidate cytidylyltransferase n=1 Tax=Lysobacter sp. Alg18-2.2 TaxID=2603204 RepID=A0A5C8KR11_9GAMM)

HSP 1 Score: 88.2 bits (217), Expect = 2.190e-16
Identity = 52/117 (44.44%), Postives = 63/117 (53.85%), Query Frame = 0
Query:  225 SPNKTWVGVTGAICLGTATALAAGPAIAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYLAVVGVL 341
            SPNKTW G  G + L  A  LA  P   FL   +  L A++                +  A VCV  ++GDL+ESL+KR A  KDSG L PGHGG  DRLD VLAA P+ + V  VL
Sbjct:  178 SPNKTWEGFWGGMALSVAVGLAVAP---FLGVGLAQLPAMA----------------LLAAAVCVAAVIGDLFESLIKRHAGCKDSGTLIPGHGGVYDRLDSVLAALPVAVLVKAVL 275          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: A0A833GKC0_9GAMM (Phosphatidate cytidylyltransferase n=1 Tax=Dokdonella sp. TaxID=2291710 RepID=A0A833GKC0_9GAMM)

HSP 1 Score: 85.9 bits (211), Expect = 2.740e-16
Identity = 51/112 (45.54%), Postives = 61/112 (54.46%), Query Frame = 0
Query:  225 SPNKTWVGVTGAICLGTATALAAGPAIAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYLA 336
            SPNKTW GV GA  L    AL  G               L   + +  G +  A L +  +      IVGDL ESLLKR A VKDSG+LFPGHGG LDR D +LAA P+++A
Sbjct:   85 SPNKTWAGVWGAFALAGVVALVGG-------------WLLDWRDGWLAGLLGVALLTVAAS------IVGDLIESLLKRHANVKDSGSLFPGHGGLLDRADSLLAALPVFVA 177          
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Match: A0A537ARC2_9PROT (Phosphatidate cytidylyltransferase n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537ARC2_9PROT)

HSP 1 Score: 87.8 bits (216), Expect = 2.780e-16
Identity = 54/121 (44.63%), Postives = 68/121 (56.20%), Query Frame = 0
Query:  225 SPNKTWVGVTGAICLGTATALA---AGPAIAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESLLKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYLAVVGVLR 342
            SP KTW GV GA+      ALA    G  +A++  +                K+APAW+     G+ V GI+GDL+ESL+KR A VKDSG L PGHGG LDR+D  LA  PL  AV+  +R
Sbjct:  170 SPGKTWEGVAGALAAVGLYALAWAYLGSVLAWIGPM----------------KVAPAWVLPVLLGLAVAGIIGDLFESLIKRQAGVKDSGTLLPGHGGILDRIDAPLAMLPL--AVLAFMR 272          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1430.3093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPW4_ECTSI1.190e-10753.87Phosphatidate cytidylyltransferase n=2 Tax=Ectocar... [more]
A0A1F2UYU0_9BACT1.280e-1752.56Phosphatidate cytidylyltransferase n=1 Tax=Acidoba... [more]
T1BWM9_9ZZZZ8.450e-1745.95Phosphatidate cytidylyltransferase n=3 Tax=mine dr... [more]
H6SM93_PARPM1.130e-1641.53Phosphatidate cytidylyltransferase n=2 Tax=Pararho... [more]
A0A2G2I7Y5_9GAMM1.450e-1644.64Phosphatidate cytidylyltransferase n=1 Tax=Methylo... [more]
A0A1K1NSS8_9GAMM2.020e-1648.21Phosphatidate cytidylyltransferase n=2 Tax=unclass... [more]
UPI00066FC1072.020e-1647.27phosphatidate cytidylyltransferase n=1 Tax=Frateur... [more]
A0A5C8KR11_9GAMM2.190e-1644.44Phosphatidate cytidylyltransferase n=1 Tax=Lysobac... [more]
A0A833GKC0_9GAMM2.740e-1645.54Phosphatidate cytidylyltransferase n=1 Tax=Dokdone... [more]
A0A537ARC2_9PROT2.780e-1644.63Phosphatidate cytidylyltransferase n=4 Tax=Betapro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01148CTP_transf_1coord: 223..338
e-value: 6.4E-25
score: 88.4
coord: 5..185
e-value: 3.3E-8
score: 33.6
NoneNo IPR availablePANTHERPTHR46382FAMILY NOT NAMEDcoord: 3..336
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..297
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..342
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 259..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 230..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..229
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
NoneNo IPR availableTMHMMTMhelixcoord: 279..301
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 82..101
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1430contigF-serratus_M_contig1430:147109..154788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1430.3093.1mRNA_F-serratus_M_contig1430.3093.1Fucus serratus malemRNAF-serratus_M_contig1430 146903..155256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1430.3093.1 ID=prot_F-serratus_M_contig1430.3093.1|Name=mRNA_F-serratus_M_contig1430.3093.1|organism=Fucus serratus male|type=polypeptide|length=343bp
MGLRERFLTAGVAIPLALWAIFFDSFSCLALILGLQAICIHELVELLRKT
RPARTLVAAGVHPFSSSLFHTIGLAVCSASAFGGRDLSAIALSVGVAALV
VRRLMLMRRHQRVALDAAGDGASVIASGVFLLTLEASAVVWVVGGWSSLV
GLRFSGPTGAADLVVLLAIVFNSDNGGLFAGSIFKALRRRHGQTLRARPS
LSASPSTAAKAAPSADVPSILAIASPNKTWVGVTGAICLGTATALAAGPA
IAFLSRLVFSLEALSSEESFSLGKMAPAWLGITGAGVCVLGIVGDLWESL
LKRAATVKDSGALFPGHGGCLDRLDGVLAAAPLYLAVVGVLR*
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