prot_F-serratus_M_contig1430.3087.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1430.3087.1
Unique Nameprot_F-serratus_M_contig1430.3087.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length121
Homology
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BLAST of mRNA_F-serratus_M_contig1430.3087.1 vs. uniprot
Match: D7G939_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G939_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.820e-55
Identity = 83/118 (70.34%), Postives = 104/118 (88.14%), Query Frame = 0 
Query:    2 VDVYVLEGFPLRGLVFHTLGKDLEEVSKVIEKCVTFLVEVDTPHTMLFSTGRAFLLPRQHLEEPPFAVVPGFPEVSGEILVTREEDFPKLTADQIFKWWRDHVSVDAEDFDRIVKSCI 119
            ++V+VL+G+P+R LVFHTLGKDLE   + IEKCV+FLVE +TPHT++FSTGR F+LPRQHLEEPPFAVVPGFPEVSGE++VTRE+DF  +TADQI++WWRD V+VD+E FDRI   C+
Sbjct:  436 LEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCL 553
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BLAST of mRNA_F-serratus_M_contig1430.3087.1 vs. uniprot
Match: A0A6H5JG89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG89_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 7.450e-55
Identity = 83/118 (70.34%), Postives = 104/118 (88.14%), Query Frame = 0 
Query:    2 VDVYVLEGFPLRGLVFHTLGKDLEEVSKVIEKCVTFLVEVDTPHTMLFSTGRAFLLPRQHLEEPPFAVVPGFPEVSGEILVTREEDFPKLTADQIFKWWRDHVSVDAEDFDRIVKSCI 119
            ++V+VL+G+P+R LVFHTLGKDLE   + IEKCV+FLVE +TPHT++FSTGR F+LPRQHLEEPPFAVVPGFPEVSGE++VTRE+DF  +TADQI++WWRD V+VD+E FDRI   C+
Sbjct:  525 LEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCL 642
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BLAST of mRNA_F-serratus_M_contig1430.3087.1 vs. uniprot
Match: A0A7S2UVC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.170e-6
Identity = 21/59 (35.59%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:    2 VDVYVLEGFPLRGLVFHTLGKDLEEVSKVIEKCVTFLVEVDTPHTMLFSTGRAFLLPRQ 60
            V V+ +E +P++ LVF   G ++++ + V+ +CV  LVE + PH+++ +    F+LPRQ
Sbjct:   70 VQVFEVENYPIKSLVFKVEGVEVKKAASVVWRCVGALVEHNVPHSLVMNESHVFVLPRQ 128
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1430.3087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G939_ECTSI1.820e-5570.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG89_9PHAE7.450e-5570.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UVC9_9STRA2.170e-635.59Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026506GDP-L-galactose/GDP-D-glucose phosphorylasePANTHERPTHR20884FAMILY NOT NAMEDcoord: 2..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1430contigF-serratus_M_contig1430:66141..66944 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1430.3087.1mRNA_F-serratus_M_contig1430.3087.1Fucus serratus malemRNAF-serratus_M_contig1430 64985..66949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1430.3087.1 ID=prot_F-serratus_M_contig1430.3087.1|Name=mRNA_F-serratus_M_contig1430.3087.1|organism=Fucus serratus male|type=polypeptide|length=121bp
MVDVYVLEGFPLRGLVFHTLGKDLEEVSKVIEKCVTFLVEVDTPHTMLFS
TGRAFLLPRQHLEEPPFAVVPGFPEVSGEILVTREEDFPKLTADQIFKWW
RDHVSVDAEDFDRIVKSCIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026506GDPGP