prot_F-serratus_M_contig143.3076.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig143.3076.1
Unique Nameprot_F-serratus_M_contig143.3076.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length150
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig143.3076.1 vs. uniprot
Match: D8LTN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN9_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 3.820e-24
Identity = 99/150 (66.00%), Postives = 115/150 (76.67%), Query Frame = 0 
Query:    1 EQGQREKGNPSPGVIGGAAFVGAGVGALFGGPXXXXXXGATAAGLCLSDNKAGDVARSTGRAGLAVINKGKELNDRYGFGEKVKDAAHTTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGEAIGKTMESVADALSEED 150
            E+GQ     P  GV+GGAA VGA  G L  GP      GA AA  CL  ++AGDVARSTG+AGLAV+ KGKE+N +YG  +KVK AAH+T+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAGEA G  M+SV +A+S++D
Sbjct:    7 EEGQPNADAPPAGVVGGAALVGATTGLLLSGPLVAIGLGAGAAACCLRRDQAGDVARSTGQAGLAVVEKGKEINTQYGVADKVKGAAHSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAGEAFGGAMDSVTNAVSKKD 156
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig143.3076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTN9_ECTSI3.820e-2466.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..150
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..47
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig143contigF-serratus_M_contig143:533941..539827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig143.3076.1mRNA_F-serratus_M_contig143.3076.1Fucus serratus malemRNAF-serratus_M_contig143 533941..539827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig143.3076.1 ID=prot_F-serratus_M_contig143.3076.1|Name=mRNA_F-serratus_M_contig143.3076.1|organism=Fucus serratus male|type=polypeptide|length=150bp
EQGQREKGNPSPGVIGGAAFVGAGVGALFGGPFIAIGLGATAAGLCLSDN
KAGDVARSTGRAGLAVINKGKELNDRYGFGEKVKDAAHTTYEKAKEVDAE
HGVVDKAKAGASRAWQRAREVDREHRLSERAGEAIGKTMESVADALSEED
back to top