prot_F-serratus_M_contig143.3071.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig143.3071.1
Unique Nameprot_F-serratus_M_contig143.3071.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length187
Homology
BLAST of mRNA_F-serratus_M_contig143.3071.1 vs. uniprot
Match: D8LTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP1_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.260e-21
Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 0
Query:   84 KVEDTLGDAWDNIKVFLWPILHSVRFCFGLCLLFYGMAFRTLAFHIIVIRLSGLDQVQSSLAQLGSKYSSARRALREAAAAAEDIGGRLIKRDSIR 179
            KVED L   W  + V   P+LH  R  FGL LLFYGMAFRT AFH+IV R++G+ QVQ ++ +L  KY+SARR++REAA AAE +G R++K D ++
Sbjct:    8 KVEDALVTMWSYMAVVGVPVLHLGRLGFGLSLLFYGMAFRTFAFHVIVFRIAGMKQVQRAVRELVGKYASARRSIREAAEAAETVGERVVKGDDLQ 103          
BLAST of mRNA_F-serratus_M_contig143.3071.1 vs. uniprot
Match: A0A6H5JP85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP85_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.840e-21
Identity = 56/122 (45.90%), Postives = 79/122 (64.75%), Query Frame = 0
Query:   58 AVTVEGVHEGKTAALHRKLKSILVLDKVEDTLGDAWDNIKVFLWPILHSVRFCFGLCLLFYGMAFRTLAFHIIVIRLSGLDQVQSSLAQLGSKYSSARRALREAAAAAEDIGGRLIKRDSIR 179
            A  V+ V  G T   +R     L++D VED L   W ++     P+ H  RF FGL LLFYGMAFRT AFH+IV R++G+ QVQ ++ +L   Y++ARR++REAA AAE +G R++K D ++
Sbjct:  189 AAAVQSVDAGGTPRKNR-----LMIDYVEDALVTMWSHMVNVGVPVFHLGRFGFGLSLLFYGMAFRTFAFHVIVFRIAGMKQVQRAVRELVGNYANARRSIREAAKAAETVGERVVKGDDLQ 305          
BLAST of mRNA_F-serratus_M_contig143.3071.1 vs. uniprot
Match: D8LTP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP3_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.010e-17
Identity = 48/88 (54.55%), Postives = 60/88 (68.18%), Query Frame = 0
Query:   77 KSILVLDKVEDTLGDAWDNIKVFLWPILHSVRFCFGLCLLFYGMAFRTLAFHIIVIRLSGLDQVQSSLAQLGSKYSSARRALREAAAA 164
            K+ + LD VED LG     +++   P LH  R  FGL LLFYGMAFRT AFH+IV R+SG  QVQ S  +L +KY  AR+++REAAAA
Sbjct:    3 KNRIFLDNVEDILGSLGRRLQMVGKPALHLTRLGFGLSLLFYGMAFRTFAFHVIVFRISGFKQVQVSSGKLAAKYRKARQSIREAAAA 90          
BLAST of mRNA_F-serratus_M_contig143.3071.1 vs. uniprot
Match: A0A6H5JP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP14_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 7.310e-15
Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   84 KVEDTLGDAWDNIKVFLWPILHSVRFCFGLCLLFYGMAFRTLAFHIIVIRLSGLDQVQSSLAQLGSKYSSARRALREAAAAAE 166
            KVED LG     +++   P LH  R  FGL LLFYGMAFRT AFH+IV R+SG  QV  SL +L +KY +AR+++R AAAAAE
Sbjct:  160 KVEDVLGSLGRWLQMVGRPPLHLARLGFGLSLLFYGMAFRTFAFHVIVFRISGFKQV--SLGKLAAKYRNARQSIRAAAAAAE 240          
BLAST of mRNA_F-serratus_M_contig143.3071.1 vs. uniprot
Match: D7FJ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ41_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 2.910e-6
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  100 LWPILHSVRFCFGLCLLFYGMAFRTLAFHIIVIRLSGLDQVQSSLAQLGSKYSSARRALREAA 162
            L+P+ H++R  FGL LLFYG  F TLAFHI+V R+SG  +   S  +L + Y  AR+ + +AA
Sbjct:  105 LYPLWHTLRGMFGLSLLFYGEDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARQTMTKAA 167          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig143.3071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LTP1_ECTSI2.260e-2154.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP85_9PHAE2.840e-2145.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP3_ECTSI3.010e-1754.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP14_9PHAE7.310e-1556.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ41_ECTSI2.910e-647.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..98
NoneNo IPR availableTMHMMTMhelixcoord: 98..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig143contigF-serratus_M_contig143:395128..410462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig143.3071.1mRNA_F-serratus_M_contig143.3071.1Fucus serratus malemRNAF-serratus_M_contig143 395128..410462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig143.3071.1 ID=prot_F-serratus_M_contig143.3071.1|Name=mRNA_F-serratus_M_contig143.3071.1|organism=Fucus serratus male|type=polypeptide|length=187bp
MASAHNPDPQGLRQRSTLAVSRGSTASAAEVDVPPSKELLVGGEDNATPA
SGSPATDAVTVEGVHEGKTAALHRKLKSILVLDKVEDTLGDAWDNIKVFL
WPILHSVRFCFGLCLLFYGMAFRTLAFHIIVIRLSGLDQVQSSLAQLGSK
YSSARRALREAAAAAEDIGGRLIKRDSIRVQVRYIL*
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